Jatropha Genome Database

JcCB0634021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0634021.10 - phase: 0 /pseudo/partial
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36460.1                                                       127   4e-30
Glyma16g22630.1                                                       110   5e-25
Glyma02g04770.1                                                       102   2e-22
Glyma02g46870.1                                                        89   2e-18
Glyma18g08910.1                                                        88   3e-18
Glyma08g43940.1                                                        88   3e-18
Glyma14g01840.1                                                        87   8e-18
Glyma07g06480.1                                                        87   1e-17
Glyma16g03080.1                                                        86   1e-17
Glyma18g32500.1                                                        80   1e-15
Glyma01g10810.1                                                        78   4e-15
Glyma17g31460.1                                                        76   1e-14
Glyma18g40780.1                                                        76   2e-14

>Glyma01g36460.1 
          Length = 247

 Score =  127 bits (319), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/86 (74%), Positives = 72/86 (83%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGKE+GDRHPKVG+GALI A ATILGNIKIGEGAMIAAGSLVLK+V PH + AG 
Sbjct: 160 VTLGGTGKEIGDRHPKVGEGALIEASATILGNIKIGEGAMIAAGSLVLKDVPPHCIAAGI 219

Query: 96  PAKLIGYVVGKDPSLTMKHDASKEFF 121
           PAK+I  +   DPSLTMKHDASK+ F
Sbjct: 220 PAKVISALQEHDPSLTMKHDASKDLF 245


>Glyma16g22630.1 
          Length = 391

 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 4/90 (4%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGKE GDRHPK+ +G LIGA ATILGNI IGE  MIAAGSLVL+ V PHS++AG 
Sbjct: 289 VTFGGTGKETGDRHPKISEGVLIGAHATILGNITIGECVMIAAGSLVLQEVPPHSIVAGV 348

Query: 96  PAKLIGYVVGKDPSLTMKHDASK----EFF 121
           PAK+IG V    PSLTM+ D +K    EFF
Sbjct: 349 PAKVIGRVHEHYPSLTMQQDENKHLSEEFF 378


>Glyma02g04770.1 
          Length = 385

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 61/79 (77%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GT KE GDRHPK+ +G LIGA ATILGNI+IGE  MIAAGSLVL+ V PHS++AG 
Sbjct: 305 VTLGGTVKETGDRHPKISEGVLIGAHATILGNIRIGECVMIAAGSLVLQEVPPHSIVAGV 364

Query: 96  PAKLIGYVVGKDPSLTMKH 114
           PAK+IG V    PSLTM+ 
Sbjct: 365 PAKVIGRVHEHYPSLTMQQ 383


>Glyma02g46870.1 
          Length = 356

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 5/86 (5%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA   ILGNIK+G+GA I AGS+V+K+V P + + G 
Sbjct: 261 VTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGDGAKIGAGSVVIKDVPPRTTVVGN 320

Query: 96  PAKLIG-----YVVGKDPSLTMKHDA 116
           PAKL+G       + K PS TM H +
Sbjct: 321 PAKLVGGKNNPVKLDKIPSFTMDHTS 346


>Glyma18g08910.1 
          Length = 391

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 11/93 (11%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA   ILGNIKIG+GA I A S+VLK V P +   G 
Sbjct: 300 VTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKEVPPRTTAVGN 359

Query: 96  PAKLIGYVVGKD--------PSLTMKHDASKEF 120
           PA+L+G   GKD        PS TM H +  ++
Sbjct: 360 PARLVG---GKDNPIKLDKMPSFTMDHTSWSDY 389


>Glyma08g43940.1 
          Length = 387

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 11/93 (11%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA   ILGNIKIG+GA I A S+VLK V P +   G 
Sbjct: 296 VTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKEVPPRTTAVGN 355

Query: 96  PAKLIGYVVGKD--------PSLTMKHDASKEF 120
           PA+L+G   GKD        PS TM H +  ++
Sbjct: 356 PARLVG---GKDNPIKLDKMPSFTMDHTSWSDY 385


>Glyma14g01840.1 
          Length = 351

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 8/94 (8%)

Query: 29  MSNFKPLL---TARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKN 85
           + N  P+L   T  GTGK  GDRHPK+GDG LIGA   ILGNIK+G+GA I AGS+V+K+
Sbjct: 246 IGNNVPILHGVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGDGAKIGAGSVVIKD 305

Query: 86  VDPHSMMAGTPAKLIG-----YVVGKDPSLTMKH 114
           V P + + G PAKL+G       + K P  TM H
Sbjct: 306 VPPRTTVVGNPAKLVGGKNSSVKLDKIPIFTMDH 339


>Glyma07g06480.1 
          Length = 286

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 51/66 (77%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA ATILGNIKIGEGA + AGS+VL +V P +   G 
Sbjct: 191 VTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPQTTAVGN 250

Query: 96  PAKLIG 101
           PA+L+G
Sbjct: 251 PARLVG 256


>Glyma16g03080.1 
          Length = 286

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 51/66 (77%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA ATILGNIKIGEGA + AGS+VL +V P +   G 
Sbjct: 191 VTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGN 250

Query: 96  PAKLIG 101
           PA+L+G
Sbjct: 251 PARLVG 256


>Glyma18g32500.1 
          Length = 169

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 11/93 (11%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRH K+GDG LIG    ILGNIKIG+GA I A S+VLK V P +   G 
Sbjct: 78  VTLGGTGKASGDRHLKIGDGVLIGPGTCILGNIKIGDGAKIGACSVVLKEVPPRTTAVGN 137

Query: 96  PAKLIGYVVGKD--------PSLTMKHDASKEF 120
           PA+++G   GKD        PS TM H +  ++
Sbjct: 138 PARVVG---GKDNPIKLDKVPSFTMDHTSWSDY 167


>Glyma01g10810.1 
          Length = 139

 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 11/89 (12%)

Query: 41  TGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGTPAKLI 100
           TGK  GDRHPK+GDG LIG    ILGNIKI +GA I   S+VLK V P + + G PA+++
Sbjct: 53  TGKASGDRHPKIGDGVLIGPGTCILGNIKICDGAKIGVCSVVLKEVPPRTTIVGNPARVV 112

Query: 101 GYVVGKD--------PSLTMKHDASKEFF 121
           G   GKD        PS TM H +  ++ 
Sbjct: 113 G---GKDNPIKLDKMPSFTMDHTSWSDYV 138


>Glyma17g31460.1 
          Length = 140

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 11/94 (11%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GT K  GDRH K+GDG LIG    ILGNIKIG+GA I A  +VLK V P + + G 
Sbjct: 49  VTLGGTSKASGDRHLKIGDGVLIGPGTCILGNIKIGDGAKIGACFVVLKEVPPRTTIVGN 108

Query: 96  PAKLIGYVVGKD--------PSLTMKHDASKEFF 121
           PA+++G   GKD        PS TM H +  ++ 
Sbjct: 109 PARVVG---GKDNPIKLDKMPSFTMDHTSWSDYV 139


>Glyma18g40780.1 
          Length = 171

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 13/95 (13%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIG--ACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMA 93
           +T  GTGK  GDRH K+GDG LIG      ILGNIKIG+GA I A S+VLK V P +   
Sbjct: 78  VTLGGTGKARGDRHLKIGDGVLIGPGTWTCILGNIKIGDGAKIGACSVVLKEVPPRTTAV 137

Query: 94  GTPAKLIGYVVGKD--------PSLTMKHDASKEF 120
           G PA+++G   GKD        PS TM H +  ++
Sbjct: 138 GNPARVVG---GKDNPIKLDKMPSFTMDHTSWFDY 169