Jatropha Genome Database

JcCB0615491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0615491.10 + phase: 0 /pseudo/partial
         (295 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10150.2                                                       239   3e-63
Glyma11g10150.1                                                       239   3e-63
Glyma12g02470.1                                                       238   6e-63
Glyma12g02470.2                                                       238   6e-63
Glyma12g30530.1                                                        98   9e-21
Glyma11g19530.1                                                        91   2e-18
Glyma12g08950.1                                                        86   4e-17
Glyma17g05400.1                                                        81   2e-15

>Glyma11g10150.2 
          Length = 1605

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/261 (52%), Positives = 182/261 (69%)

Query: 2    YLNFYSFGHIASSVAEELMRKTSDKAIEDPIKSDEEIISAQMKIISKKTAKFRWPNIPRL 61
            Y+N+YSF   AS VA+ELM K+ +K  +    S+EEI+S Q K+I KK+  F WP+I  L
Sbjct: 900  YINYYSFARTASFVAQELMCKSPEKMNKIFAMSEEEIMSDQAKVIMKKSTNFCWPSIQDL 959

Query: 62   NANVHKEKCGWCYCCRVSSDDLGCLFNVCLGPVQAGSVDEVVGLQSKRNKKADFTDLISY 121
            NA  HKEKCGWC+ C+  ++D  CLFN  + P+     + +VGLQ ++ +     D+I  
Sbjct: 960  NAAAHKEKCGWCFTCKGENEDRDCLFNSVVKPIWEVPNNTLVGLQPRKIQNGRLRDIICL 1019

Query: 122  XXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSLLLTLESNLHRLALSAEWLK 181
                          PWLN H + LW K +L+ASD + VK LLL LESNL  LALSA+WLK
Sbjct: 1020 IFSLEVRLRGLLLGPWLNLHQTDLWHKDLLKASDFLPVKRLLLLLESNLRLLALSADWLK 1079

Query: 182  YVDSAATMGSASHIVIASSRASSKNGIGRKRARYSELDSNPSLNSASGLGMLWWRGGRIS 241
            +VDS ATMGSA+HIV++SSR SS++GIGRKRAR ++++++ S N+ASGLGM WWRGGR+S
Sbjct: 1080 HVDSVATMGSATHIVVSSSRTSSRHGIGRKRARNTDIETSSSSNTASGLGMYWWRGGRLS 1139

Query: 242  RRLFSWKILPSSLVSKAARRG 262
            R+LF+ K LP SLV+KAAR+G
Sbjct: 1140 RKLFNCKALPHSLVTKAARQG 1160


>Glyma11g10150.1 
          Length = 1605

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/261 (52%), Positives = 182/261 (69%)

Query: 2    YLNFYSFGHIASSVAEELMRKTSDKAIEDPIKSDEEIISAQMKIISKKTAKFRWPNIPRL 61
            Y+N+YSF   AS VA+ELM K+ +K  +    S+EEI+S Q K+I KK+  F WP+I  L
Sbjct: 900  YINYYSFARTASFVAQELMCKSPEKMNKIFAMSEEEIMSDQAKVIMKKSTNFCWPSIQDL 959

Query: 62   NANVHKEKCGWCYCCRVSSDDLGCLFNVCLGPVQAGSVDEVVGLQSKRNKKADFTDLISY 121
            NA  HKEKCGWC+ C+  ++D  CLFN  + P+     + +VGLQ ++ +     D+I  
Sbjct: 960  NAAAHKEKCGWCFTCKGENEDRDCLFNSVVKPIWEVPNNTLVGLQPRKIQNGRLRDIICL 1019

Query: 122  XXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSLLLTLESNLHRLALSAEWLK 181
                          PWLN H + LW K +L+ASD + VK LLL LESNL  LALSA+WLK
Sbjct: 1020 IFSLEVRLRGLLLGPWLNLHQTDLWHKDLLKASDFLPVKRLLLLLESNLRLLALSADWLK 1079

Query: 182  YVDSAATMGSASHIVIASSRASSKNGIGRKRARYSELDSNPSLNSASGLGMLWWRGGRIS 241
            +VDS ATMGSA+HIV++SSR SS++GIGRKRAR ++++++ S N+ASGLGM WWRGGR+S
Sbjct: 1080 HVDSVATMGSATHIVVSSSRTSSRHGIGRKRARNTDIETSSSSNTASGLGMYWWRGGRLS 1139

Query: 242  RRLFSWKILPSSLVSKAARRG 262
            R+LF+ K LP SLV+KAAR+G
Sbjct: 1140 RKLFNCKALPHSLVTKAARQG 1160


>Glyma12g02470.1 
          Length = 1649

 Score =  238 bits (607), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/261 (52%), Positives = 181/261 (69%)

Query: 2    YLNFYSFGHIASSVAEELMRKTSDKAIEDPIKSDEEIISAQMKIISKKTAKFRWPNIPRL 61
            Y+N+YSF   AS VA+ELM K+ +K  +    S+EE++S Q K+I+KK+  F WP+I  L
Sbjct: 876  YINYYSFARTASFVAQELMCKSPEKMNKIFAMSEEEVMSDQAKVITKKSTNFCWPSIQNL 935

Query: 62   NANVHKEKCGWCYCCRVSSDDLGCLFNVCLGPVQAGSVDEVVGLQSKRNKKADFTDLISY 121
            NA  HKEKCGWC+ C+  ++D  CLFN  + PV     + +VGLQ ++ +     D+I  
Sbjct: 936  NAAAHKEKCGWCFTCKGENEDRDCLFNSVVKPVWEVPNNILVGLQPRKIQNGRLRDIICL 995

Query: 122  XXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSLLLTLESNLHRLALSAEWLK 181
                          PWLN H + LW K +L+ SD   VK LLL LESNL  LALSA+WLK
Sbjct: 996  IFSLEVRLRGLLLGPWLNLHQTNLWHKDLLKTSDFFPVKRLLLLLESNLCLLALSADWLK 1055

Query: 182  YVDSAATMGSASHIVIASSRASSKNGIGRKRARYSELDSNPSLNSASGLGMLWWRGGRIS 241
            +VDS ATMGSA+HIV++SSR SS++GIGRKRAR S+++++ S N+ASGLGM WWRGGR+S
Sbjct: 1056 HVDSVATMGSATHIVVSSSRTSSRHGIGRKRARNSDIETSSSSNTASGLGMYWWRGGRLS 1115

Query: 242  RRLFSWKILPSSLVSKAARRG 262
            R+LF+ K LP SLV+KAAR+G
Sbjct: 1116 RKLFNCKALPHSLVTKAARQG 1136


>Glyma12g02470.2 
          Length = 1633

 Score =  238 bits (607), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/261 (52%), Positives = 181/261 (69%)

Query: 2    YLNFYSFGHIASSVAEELMRKTSDKAIEDPIKSDEEIISAQMKIISKKTAKFRWPNIPRL 61
            Y+N+YSF   AS VA+ELM K+ +K  +    S+EE++S Q K+I+KK+  F WP+I  L
Sbjct: 876  YINYYSFARTASFVAQELMCKSPEKMNKIFAMSEEEVMSDQAKVITKKSTNFCWPSIQNL 935

Query: 62   NANVHKEKCGWCYCCRVSSDDLGCLFNVCLGPVQAGSVDEVVGLQSKRNKKADFTDLISY 121
            NA  HKEKCGWC+ C+  ++D  CLFN  + PV     + +VGLQ ++ +     D+I  
Sbjct: 936  NAAAHKEKCGWCFTCKGENEDRDCLFNSVVKPVWEVPNNILVGLQPRKIQNGRLRDIICL 995

Query: 122  XXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSLLLTLESNLHRLALSAEWLK 181
                          PWLN H + LW K +L+ SD   VK LLL LESNL  LALSA+WLK
Sbjct: 996  IFSLEVRLRGLLLGPWLNLHQTNLWHKDLLKTSDFFPVKRLLLLLESNLCLLALSADWLK 1055

Query: 182  YVDSAATMGSASHIVIASSRASSKNGIGRKRARYSELDSNPSLNSASGLGMLWWRGGRIS 241
            +VDS ATMGSA+HIV++SSR SS++GIGRKRAR S+++++ S N+ASGLGM WWRGGR+S
Sbjct: 1056 HVDSVATMGSATHIVVSSSRTSSRHGIGRKRARNSDIETSSSSNTASGLGMYWWRGGRLS 1115

Query: 242  RRLFSWKILPSSLVSKAARRG 262
            R+LF+ K LP SLV+KAAR+G
Sbjct: 1116 RKLFNCKALPHSLVTKAARQG 1136


>Glyma12g30530.1 
          Length = 1503

 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 21/245 (8%)

Query: 44  KIISKKTAKFRWPNIPRLNANVHKEKCGWCYCCRVS-SDDLGCLFNVCLGPVQAGSVDEV 102
           K  S+  ++F WP+  +    V +E+CGWC  C+   S   GC+ N         ++  +
Sbjct: 621 KAFSQTASRFFWPSSEKKLVEVPRERCGWCISCKAPVSSKKGCMLNHAAISATKSAMKIL 680

Query: 103 VGLQSKRNKKADFTDLISYXXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSL 162
            G    R+ +     + +Y              P+L+  Y K W K V RA     +K L
Sbjct: 681 SGFAPVRSGEGIIPSIATYVIYMEESLHGLIVGPFLSEWYRKHWRKQVERAKSFSDIKPL 740

Query: 163 LLTLESNLHRLALSAEWLKYVD----SAATMGSASHIVIASSRASSKNGIGRKRARYSEL 218
           LL LE N+  +A   +W+K +D      +TM SA+  +          G  +KRA     
Sbjct: 741 LLKLEENIRTIAFCGDWVKLMDDWLAEFSTMQSAACTL----------GTTQKRATCGRR 790

Query: 219 DSNPSLNSASGLG----MLWWRGGRISRRLFSWKILPSSLVSKAARR--GLXSFFSVFYM 272
               S+N  +  G      WW GG+ ++ +F   +LP S+V K AR+  GL     +FY 
Sbjct: 791 KKQLSINKVTAGGCQENFAWWHGGKFTKSVFQKAVLPKSMVRKGARQAGGLRKISGIFYA 850

Query: 273 NSGRI 277
           +   I
Sbjct: 851 DGSEI 855


>Glyma11g19530.1 
          Length = 1360

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)

Query: 2   YLNFYSFGHIASSVAEELMRKTSDKAIEDPIKSDEEIISA------QMKIISKKTAKFRW 55
           Y N+Y+ G+ A+S A +    +S+++  D   SD +  +A      Q K  S   ++F W
Sbjct: 610 YNNYYAHGYFAASAAAKFALLSSEESRSDGHASDNQRKNASGNTYLQAKAFSLTASRFFW 669

Query: 56  PNIPRLNANVHKEKCGWCYCCRV-SSDDLGCLFNVCLGPVQAGSVDEVVGLQSKRNKKAD 114
           P+  +    V +E+CGWC+ C+  +S   GC+ N         +   + G  S R+ +  
Sbjct: 670 PSSEKKPVEVPRERCGWCFSCKAPASSKRGCMLNHAALSATKNAAKMLAGFSSIRSGEGV 729

Query: 115 FTDLISYXXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSLLLTLESNLHRLA 174
              + +Y              P+L+  Y + W K                 LE N+  +A
Sbjct: 730 LPSIATYIIYMEECLHGLVVGPFLSASYRRQWRKQ----------------LEENIRTIA 773

Query: 175 LSAEWLKYVDS-----AATMGSASHIVIASSRASSKNGIGRKRARYSELDSNPSLNSASG 229
              +W+K +D      +    + S +  A  RA S    GR+  + S  D   +      
Sbjct: 774 FCGDWVKLMDDWLVEFSMVQSATSTLGTAQKRAPS----GRRYKKRSANDEATAEGCPEN 829

Query: 230 LGMLWWRGGRISRRLFSWKILPSSLVSKAARRGLXSFFS-VFYMNSGRI 277
              +WWRGG+ ++ +F   +LP S+V KAAR+G     S +FY +S  I
Sbjct: 830 F--VWWRGGKFTKFIFQKAVLPKSMVRKAARQGGSRKISGIFYADSSEI 876


>Glyma12g08950.1 
          Length = 1429

 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 35/289 (12%)

Query: 2   YLNFYSFGHIASSVAEELMRKTSDKAIEDPIKSDEEIISA------QMKIISKKTAKFRW 55
           Y+N Y+ G  A+S A +    +S+++  +   SD +  +A      Q K  S   ++F W
Sbjct: 585 YINHYAHGDFAASAAAKFALLSSEESRSEGHVSDNQRKTASGNTYLQAKAFSLTASRFFW 644

Query: 56  PNIPRLNANVHKEKCGWCYCCRV-SSDDLGCLFNVCLGPVQAGSVDEVVGLQSKRNKKAD 114
           P+  +    V +E+CGWC+ C+  +S   GC+ N         +V  + G    R+ +A 
Sbjct: 645 PSSEKKPVEVPRERCGWCFSCKAPASSKRGCMLNHAALSATKSAVKMLAGFSPIRSGEAI 704

Query: 115 FTDLISYXXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSLLLTLESNLHRLA 174
              + +Y              P+L+  Y + W K                 LE N+  + 
Sbjct: 705 LPSIATYIIYMEECLRGLVVGPFLSASYRRQWRKQ----------------LEENIRTIV 748

Query: 175 LSAEWLKYVDS-----AATMGSASHIVIASSRASSKNGIGRKRARYSELDSNPSLNSASG 229
              +W+K +D      +    ++S +  A  RA S    GR+  +   L ++ +      
Sbjct: 749 FCGDWVKLMDDWLVEFSMVQSASSTLGTAQKRAPS----GRRYKK--RLANDEATADGCP 802

Query: 230 LGMLWWRGGRISRRLFSWKILPSSLVSKAARRGLXSFFS-VFYMNSGRI 277
              +WWRGG+ ++ +F   +LP S+V KAAR+G     S +FY +   I
Sbjct: 803 ENFVWWRGGKFTKFIFQKAVLPKSMVRKAARQGGSRKISGIFYADGSEI 851


>Glyma17g05400.1 
          Length = 1410

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 36/244 (14%)

Query: 44  KIISKKTAKFRWPNIPRLNANVHKEKCGWCYCCRVS-SDDLGCLFNVCLGPVQAGSVDEV 102
           K  S+  ++F WP+  +    V +E+CGWC  C+ S S   GC+ N         ++  +
Sbjct: 689 KAFSQTASRFFWPSSEKKLVEVPRERCGWCISCKASVSSKKGCMLNHAAISATKSAMKIL 748

Query: 103 VGLQSKRNKKADFTDLISYXXXXXXXXXXXXXXPWLNPHYSKLWCKSVLRASDIVSVKSL 162
            GL   R+ +     + +Y              P+L+  Y K W K              
Sbjct: 749 SGLAPVRSGEGIIPSIATYVMYMEESLRGLIVGPFLSECYRKHWRKQ------------- 795

Query: 163 LLTLESNLHRLALSAEWLKYVD----SAATMGSASHIVIASSRASSKNGIGRKRARYSEL 218
              LE N+  +A   +W+K +D      +TM SA+  +          G  +KRA   + 
Sbjct: 796 ---LEENIRTIAFCGDWVKLMDDWLAEFSTMQSATCTL----------GTTQKRATCGKR 842

Query: 219 DSNPSLNSASGLG----MLWWRGGRISRRLFSWKILPSSLVSKAARR-GLXSFFSVFYMN 273
               S+N  +  G      WW GG+ ++ +F   +LP S+V K AR+ GL     +FY +
Sbjct: 843 KKQLSINKVTVGGCQENFAWWHGGKFTKSVFQKAVLPKSMVKKGARQGGLRKISGIFYAD 902

Query: 274 SGRI 277
              I
Sbjct: 903 GSEI 906