Jatropha Genome Database

JcCB0611681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0611681.10 - phase: 1 /pseudo/partial
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g02640.1                                                       146   6e-36
Glyma13g42800.1                                                       143   5e-35
Glyma13g42800.2                                                       143   5e-35
Glyma07g01440.1                                                       129   5e-31
Glyma08g20830.4                                                       127   2e-30
Glyma08g20830.3                                                       127   3e-30
Glyma08g20830.1                                                       124   2e-29
Glyma08g20830.2                                                       124   2e-29
Glyma04g35860.2                                                        57   4e-09
Glyma04g35860.1                                                        56   9e-09

>Glyma15g02640.1 
          Length = 514

 Score =  146 bits (368), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 70/116 (60%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKIRWCQTANGALFLLSTNDKTI            IS+MN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDPSK++GNG           +PY+ NGG P++ Y+  SNDF+FPPGG+PSLRLP+
Sbjct: 159 VDPSKSMGNGSIASSSNSSSSRPYLVNGGSPDR-YNYISNDFSFPPGGLPSLRLPM 213


>Glyma13g42800.1 
          Length = 515

 Score =  143 bits (360), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKIRWCQ ANGALFLLSTNDKTI            IS+MN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKISEMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDPSK++GNG           +PY+ANGG P++ Y+  SNDF+FPPGGIPSLRLP+
Sbjct: 159 VDPSKSMGNGSIASSSNSSSSRPYLANGGSPDR-YNYISNDFSFPPGGIPSLRLPM 213


>Glyma13g42800.2 
          Length = 514

 Score =  143 bits (360), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKIRWCQ ANGALFLLSTNDKTI            IS+MN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKISEMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDPSK++GNG           +PY+ANGG P++ Y+  SNDF+FPPGGIPSLRLP+
Sbjct: 159 VDPSKSMGNGSIASSSNSSSSRPYLANGGSPDR-YNYISNDFSFPPGGIPSLRLPM 213


>Glyma07g01440.1 
          Length = 514

 Score =  129 bits (325), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/116 (57%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKI+WCQTANGALFLLSTNDKTI            +SDMN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDP KA+GNG           K Y+ANG  P+  Y+  +NDF+FPP G+PSLRLP+
Sbjct: 159 VDP-KAMGNGSIASSSNSSSSKSYLANGVSPDGPYNYLNNDFSFPPEGVPSLRLPL 213


>Glyma08g20830.4 
          Length = 476

 Score =  127 bits (320), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKI+WCQTANGALFLLSTNDKTI            +SDMN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDP K +GNG           K Y+ANG   +  Y+  +NDF+FPPGG+PSLRLP+
Sbjct: 159 VDP-KLMGNGSIASSSNSGSSKSYLANGVSSDGPYNYLNNDFSFPPGGVPSLRLPL 213


>Glyma08g20830.3 
          Length = 475

 Score =  127 bits (319), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKI+WCQTANGALFLLSTNDKTI            +SDMN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDP K +GNG           K Y+ANG   +  Y+  +NDF+FPPGG+PSLRLP+
Sbjct: 159 VDP-KLMGNGSIASSSNSGSSKSYLANGVSSDGPYNYLNNDFSFPPGGVPSLRLPL 213


>Glyma08g20830.1 
          Length = 514

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKI+WCQTANGALFLLSTNDKTI            +SDMN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDP K +GNG           K Y+ANG   +  Y+  +NDF+FPPGG+PSLRLP+
Sbjct: 159 VDP-KLMGNGSIASSSNSGSSKSYLANGVSSDGPYNYLNNDFSFPPGGVPSLRLPL 213


>Glyma08g20830.2 
          Length = 398

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTIXXXXXXXXXXXXISDMN 69
           F  +  +FDYLKSL+IEEKINKI+WCQTANGALFLLSTNDKTI            +SDMN
Sbjct: 99  FQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMN 158

Query: 70  VDPSKALGNGXXXXXXXXXXXKPYIANGGWPEKSYSCPSNDFTFPPGGIPSLRLPV 125
           VDP K +GNG           K Y+ANG   +  Y+  +NDF+FPPGG+PSLRLP+
Sbjct: 159 VDP-KLMGNGSIASSSNSGSSKSYLANGVSSDGPYNYLNNDFSFPPGGVPSLRLPL 213


>Glyma04g35860.2 
          Length = 378

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTI 52
           F  +  +FDYLKS++IEEKINK+RW  + +   F+LSTNDKTI
Sbjct: 94  FQSHEPEFDYLKSVEIEEKINKVRWWMSNDSLQFILSTNDKTI 136


>Glyma04g35860.1 
          Length = 437

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query: 10  FHMYLSQFDYLKSLKIEEKINKIRWCQTANGALFLLSTNDKTI 52
           F  +  +FDYLKS++IEEKINK+RW  + +   F+LSTNDKTI
Sbjct: 94  FQSHEPEFDYLKSVEIEEKINKVRWWMSNDSLQFILSTNDKTI 136