Jatropha Genome Database

JcCB0603751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0603751.10 - phase: 0 /partial
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02190.1                                                       270   3e-73
Glyma17g09740.1                                                       266   7e-72
Glyma16g10880.1                                                       245   1e-65
Glyma16g10880.3                                                       245   1e-65
Glyma16g10880.2                                                       221   2e-58
Glyma15g18270.1                                                        85   2e-17

>Glyma05g02190.1 
          Length = 475

 Score =  270 bits (691), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 125/138 (90%), Positives = 134/138 (97%)

Query: 4   GLEVIEAHYLLGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPD 63
           GLEVIEAHYL GADYD+IEIVIHPQSIIHSM+ET+DSSVLAQLGWPDMRLPILYT+SWPD
Sbjct: 296 GLEVIEAHYLFGADYDHIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPD 355

Query: 64  RISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEM 123
           RI CSE+TWPRLDLCK GSLTFK PDNVKYPSM+LA++AGRAGGTMTGVLSAANEKAVEM
Sbjct: 356 RIYCSEVTWPRLDLCKLGSLTFKTPDNVKYPSMNLAFSAGRAGGTMTGVLSAANEKAVEM 415

Query: 124 FIDEKISYLDIFKIVELT 141
           FIDEKISYLDIFK+VELT
Sbjct: 416 FIDEKISYLDIFKVVELT 433


>Glyma17g09740.1 
          Length = 474

 Score =  266 bits (679), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 126/138 (91%), Positives = 132/138 (95%)

Query: 4   GLEVIEAHYLLGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPD 63
           GLEVIEAHYL GADYD+IEIVIHPQSIIHSM+ET+DSSVLAQLGWPDMRLPILYT+SWPD
Sbjct: 295 GLEVIEAHYLFGADYDHIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPD 354

Query: 64  RISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEM 123
           RI CSE TWP LDLCK GSLTFK PDNVKYPSM+LAYAAGRAGGTMTGVLSAANEKAVEM
Sbjct: 355 RIYCSEDTWPCLDLCKIGSLTFKTPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEM 414

Query: 124 FIDEKISYLDIFKIVELT 141
           FIDEKISYLDIFK+VELT
Sbjct: 415 FIDEKISYLDIFKVVELT 432


>Glyma16g10880.1 
          Length = 465

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 114/138 (82%), Positives = 129/138 (93%)

Query: 4   GLEVIEAHYLLGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPD 63
           GLEVIEAHYL GA YD+IEIVIHPQSIIHS+VET+DSSV+AQLG PDMRLP+LYT+SWP+
Sbjct: 291 GLEVIEAHYLFGASYDDIEIVIHPQSIIHSLVETQDSSVIAQLGIPDMRLPLLYTLSWPE 350

Query: 64  RISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEM 123
           RI CSE+TWPRLDL K GSLTF APD+ K+PS++L YAAGRAGGTMTGVLSAANEKAVEM
Sbjct: 351 RIYCSEVTWPRLDLSKYGSLTFYAPDDKKFPSVNLCYAAGRAGGTMTGVLSAANEKAVEM 410

Query: 124 FIDEKISYLDIFKIVELT 141
           F++EKISYLDIFK+VELT
Sbjct: 411 FVEEKISYLDIFKVVELT 428


>Glyma16g10880.3 
          Length = 463

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 114/138 (82%), Positives = 129/138 (93%)

Query: 4   GLEVIEAHYLLGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPD 63
           GLEVIEAHYL GA YD+IEIVIHPQSIIHS+VET+DSSV+AQLG PDMRLP+LYT+SWP+
Sbjct: 289 GLEVIEAHYLFGASYDDIEIVIHPQSIIHSLVETQDSSVIAQLGIPDMRLPLLYTLSWPE 348

Query: 64  RISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEM 123
           RI CSE+TWPRLDL K GSLTF APD+ K+PS++L YAAGRAGGTMTGVLSAANEKAVEM
Sbjct: 349 RIYCSEVTWPRLDLSKYGSLTFYAPDDKKFPSVNLCYAAGRAGGTMTGVLSAANEKAVEM 408

Query: 124 FIDEKISYLDIFKIVELT 141
           F++EKISYLDIFK+VELT
Sbjct: 409 FVEEKISYLDIFKVVELT 426


>Glyma16g10880.2 
          Length = 415

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 102/125 (81%), Positives = 116/125 (92%)

Query: 4   GLEVIEAHYLLGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPD 63
           GLEVIEAHYL GA YD+IEIVIHPQSIIHS+VET+DSSV+AQLG PDMRLP+LYT+SWP+
Sbjct: 291 GLEVIEAHYLFGASYDDIEIVIHPQSIIHSLVETQDSSVIAQLGIPDMRLPLLYTLSWPE 350

Query: 64  RISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEM 123
           RI CSE+TWPRLDL K GSLTF APD+ K+PS++L YAAGRAGGTMTGVLSAANEKAVEM
Sbjct: 351 RIYCSEVTWPRLDLSKYGSLTFYAPDDKKFPSVNLCYAAGRAGGTMTGVLSAANEKAVEM 410

Query: 124 FIDEK 128
           F++EK
Sbjct: 411 FVEEK 415


>Glyma15g18270.1 
          Length = 361

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 68/137 (49%), Gaps = 40/137 (29%)

Query: 5   LEVIEAHYLLGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPDR 64
           LEVI+A YL GADYD+IEI IHP+S IH +                     L+   W   
Sbjct: 223 LEVIDADYLFGADYDHIEIFIHPKSSIHRIY--------------------LFLHIWGAL 262

Query: 65  ISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMF 124
           I   +   P       GSLTFK      YPSM+LAY  G             NEK  EMF
Sbjct: 263 ICVCQS--PLHSHGLLGSLTFK------YPSMNLAYVVG------------PNEKVAEMF 302

Query: 125 IDEKISYLDIFKIVELT 141
           IDEKISYLDI K+VELT
Sbjct: 303 IDEKISYLDILKVVELT 319