Jatropha Genome Database

JcCB0603701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0603701.10 - phase: 0 /partial
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g38050.1                                                       193   4e-50
Glyma18g38060.1                                                       181   2e-46
Glyma08g47070.1                                                       173   4e-44
Glyma08g47060.1                                                       171   2e-43
Glyma16g23380.1                                                        86   8e-18
Glyma02g05170.1                                                        85   3e-17
Glyma09g02940.1                                                        71   3e-13

>Glyma18g38050.1 
          Length = 227

 Score =  193 bits (490), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 111/136 (81%), Gaps = 3/136 (2%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQNVMEGR 60
           GNLGWAYMQK N++ AE VY+KAQ+IDPD NKACNLGLCLI+QAR++EAQ VL++V++G 
Sbjct: 95  GNLGWAYMQKMNYMMAEVVYRKAQIIDPDCNKACNLGLCLIRQARYEEAQLVLEDVLKGN 154

Query: 61  YPGSEDIKSIKRAQELLREVETKMPSPELTGILGFNLDDHDFVKGLEEMMEEWAPARSKR 120
            PGS+D K+ KRAQ+L  E+ + +P P  + +LG    D +F+KGLE++M EW P RSKR
Sbjct: 155 LPGSDDSKARKRAQDLRTELRSMLPPPHFSDLLGL---DDEFIKGLEQLMNEWGPIRSKR 211

Query: 121 LPIFEQISSFRDQLAC 136
           LPIFE+ISSFRDQLAC
Sbjct: 212 LPIFEEISSFRDQLAC 227


>Glyma18g38060.1 
          Length = 256

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 111/136 (81%), Gaps = 3/136 (2%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQNVMEGR 60
           GNLGWAYMQK N++ AE V++KAQM+D DANKACNLGLCL++Q R++EA ++L+ V++G+
Sbjct: 124 GNLGWAYMQKENYMMAEVVFKKAQMVDADANKACNLGLCLMRQCRYEEAYYILEEVLQGK 183

Query: 61  YPGSEDIKSIKRAQELLREVETKMPSPELTGILGFNLDDHDFVKGLEEMMEEWAPARSKR 120
           + GS++IKS KRA+ELL E+   +P PE    L  +LDD DFVKG+++M++ W   RS+R
Sbjct: 184 HQGSDEIKSRKRAEELLEELNANLPQPEFMADL--DLDD-DFVKGIDDMLDAWNTNRSRR 240

Query: 121 LPIFEQISSFRDQLAC 136
           LPIFE+ISSFRDQLAC
Sbjct: 241 LPIFEEISSFRDQLAC 256


>Glyma08g47070.1 
          Length = 273

 Score =  173 bits (439), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/137 (58%), Positives = 106/137 (77%), Gaps = 4/137 (2%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQNVMEGR 60
           GNLGWAYMQK N++ AE V++KAQM+D DANKACNLGLCL++Q+R+ EA ++L+ V+ G 
Sbjct: 140 GNLGWAYMQKENYMMAEVVFKKAQMVDADANKACNLGLCLMRQSRYKEAYYILEEVLMGI 199

Query: 61  YPGSEDIKSIKRAQELLREVETKMPSPELTGILGFNLDDHDFVKGLEEMMEEW-APARSK 119
            PGS++IKS KRA+ELL E+   +P PE    LG    D DFVKG++++++ W    R +
Sbjct: 200 IPGSDEIKSRKRAEELLEELNANLPQPEFMDALGL---DDDFVKGIDDLLDAWNTNNRPR 256

Query: 120 RLPIFEQISSFRDQLAC 136
           RLPIFE+ISSFRDQLAC
Sbjct: 257 RLPIFEEISSFRDQLAC 273


>Glyma08g47060.1 
          Length = 246

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 97/124 (78%), Gaps = 3/124 (2%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQNVMEGR 60
           GNLGWAYMQK N++  E VY+K QMIDPD NKACNLGLCLI+QAR++EAQ +L +V++G 
Sbjct: 126 GNLGWAYMQKMNYMMEEVVYRKVQMIDPDCNKACNLGLCLIRQARYEEAQLILDDVLKGN 185

Query: 61  YPGSEDIKSIKRAQELLREVETKMPSPELTGILGFNLDDHDFVKGLEEMMEEWAPARSKR 120
            PGS+D KS KRAQ+LL E+ + +P P  + +LG    D +F+KGLE++M EW P RSKR
Sbjct: 186 LPGSDDSKSRKRAQDLLTELRSMLPPPHFSDLLGL---DDEFIKGLEQLMNEWGPIRSKR 242

Query: 121 LPIF 124
           LPIF
Sbjct: 243 LPIF 246


>Glyma16g23380.1 
          Length = 501

 Score = 86.3 bits (212), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 4/88 (4%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQN----V 56
           GNLGWA MQ++N++ AE  Y++A +I PD NK CNLG+CL+KQ R  EA+  L      V
Sbjct: 181 GNLGWALMQQNNYIEAEEAYRRALLIAPDNNKMCNLGICLMKQGRIGEAKETLYRVKPAV 240

Query: 57  MEGRYPGSEDIKSIKRAQELLREVETKM 84
           M+G       +K+ +RAQ++L+++E++M
Sbjct: 241 MDGPRGSDSHLKAYERAQQMLKDLESEM 268


>Glyma02g05170.1 
          Length = 500

 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 4/88 (4%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQN----V 56
           GNLGWA MQ++N++ AE  Y++A  I PD NK CNLG+CL+KQ R  EA+  L      V
Sbjct: 181 GNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLYRVKPAV 240

Query: 57  MEGRYPGSEDIKSIKRAQELLREVETKM 84
           M+G       +K+ +RAQ++L+++E++M
Sbjct: 241 MDGPRGSDSHLKAYERAQQMLKDLESEM 268


>Glyma09g02940.1 
          Length = 289

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 1   GNLGWAYMQKSNFLAAEAVYQKAQMIDPDANKACNLGLCLIKQARFDEAQFVLQNV---M 57
           GNL WAY+QK ++  AE  Y+KA   + D NK CNL +CLI   +  EA+F+LQ V    
Sbjct: 192 GNLAWAYLQKGDYKTAEEHYRKALSFEVDRNKQCNLAICLIHMNKIKEAKFLLQAVRTAT 251

Query: 58  EGRYPGSEDIKSIKRAQELLREVET 82
           + R       KS +RA ++L E+ET
Sbjct: 252 KNRKMDDSFAKSFERASQMLIEIET 276