Jatropha Genome Database
- JcCB0601851.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0601851.10 + phase: 1 /pseudo/partial
(85 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g38850.1 172 9e-44
Glyma12g31540.1 171 1e-43
Glyma11g18090.1 148 1e-36
Glyma12g10120.1 145 1e-35
Glyma02g17040.1 116 6e-27
Glyma10g02760.1 115 1e-26
Glyma11g21750.1 80 6e-16
Glyma12g22850.1 72 1e-13
Glyma05g00270.1 56 8e-09
Glyma17g08780.1 56 1e-08
Glyma10g28770.1 54 4e-08
Glyma16g17660.1 52 1e-07
Glyma20g22880.1 52 1e-07
Glyma04g32230.1 51 3e-07
Glyma03g39030.1 50 6e-07
Glyma03g39640.2 50 7e-07
Glyma03g39640.1 50 7e-07
Glyma19g42270.1 49 1e-06
Glyma19g41600.1 49 1e-06
Glyma20g37940.1 49 1e-06
Glyma06g22320.1 48 2e-06
>Glyma13g38850.1
Length = 988
Score = 172 bits (435), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 83/85 (97%), Positives = 83/85 (97%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 137 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 196
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLTQQ PRWHRV VQGPGPGPRY
Sbjct: 197 VLDLTQQWPRWHRVSVQGPGPGPRY 221
>Glyma12g31540.1
Length = 951
Score = 171 bits (434), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/85 (97%), Positives = 83/85 (97%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 140 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 199
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLTQQ PRWHRV VQGPGPGPRY
Sbjct: 200 VLDLTQQWPRWHRVSVQGPGPGPRY 224
>Glyma11g18090.1
Length = 1010
Score = 148 bits (374), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/85 (94%), Positives = 82/85 (96%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAGATADVHCYDV++NKWSRITP GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 149 LAGATADVHCYDVISNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 208
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLTQQRPRWHRV V GPGPGPRY
Sbjct: 209 VLDLTQQRPRWHRVGVPGPGPGPRY 233
>Glyma12g10120.1
Length = 1001
Score = 145 bits (365), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/85 (91%), Positives = 81/85 (95%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAGATAD+HCYDV+TNKWSRITP GEPP+ RAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 141 LAGATADIHCYDVITNKWSRITPIGEPPSSRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 200
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLTQQRPRWHRV V GPGPGPRY
Sbjct: 201 VLDLTQQRPRWHRVGVPGPGPGPRY 225
>Glyma02g17040.1
Length = 881
Score = 116 bits (290), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 67/85 (78%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAG T VH YDV + KW+ I P GEPP+PRAAH A AVGTMVV QGGIGPAG S +DL+
Sbjct: 69 LAGVTNTVHSYDVQSRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLY 128
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLT + +WHRVVVQG GPGPRY
Sbjct: 129 VLDLTNDKYKWHRVVVQGQGPGPRY 153
>Glyma10g02760.1
Length = 936
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 67/85 (78%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAG T VH YDV + KW+ + P GEPP+PRAAH A AVGTMVV QGGIGPAG S +DL+
Sbjct: 69 LAGVTNTVHAYDVQSRKWTSVKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLY 128
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLT + +WHRVVVQG GPGPRY
Sbjct: 129 VLDLTNDKYKWHRVVVQGQGPGPRY 153
>Glyma11g21750.1
Length = 43
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 39/43 (90%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMV 43
LAGATADVH YDVLTNKWSRITPF EPPTPRA H+AT VGTMV
Sbjct: 1 LAGATADVHYYDVLTNKWSRITPFREPPTPRATHLATVVGTMV 43
>Glyma12g22850.1
Length = 46
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 33/36 (91%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVA 36
LAGATADVHCYDVL NKWSRITPF EPPTPR AHVA
Sbjct: 1 LAGATADVHCYDVLNNKWSRITPFREPPTPRVAHVA 36
>Glyma05g00270.1
Length = 650
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 5 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSA-EDLHVLD 63
T VH +D + WS+ G PPTPR +H TAVG + + GG G++ +DLH+LD
Sbjct: 51 TNQVHVFDTVKQAWSQPALKGSPPTPRDSHTCTAVGDNLFVFGGTD--GMNPLKDLHILD 108
Query: 64 LTQQRPRWHRVVVQGPGPGPR 84
+ Q W ++G GP R
Sbjct: 109 TSLQ--TWVSPTIRGEGPPAR 127
>Glyma17g08780.1
Length = 625
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 5 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSA-EDLHVLD 63
T VH +D + WS+ G PPTPR +H +TAVG + + GG G++ +DLH+LD
Sbjct: 53 TNQVHVFDTVKQTWSQPALKGSPPTPRDSHTSTAVGDNLFVFGGTD--GMNPLKDLHILD 110
Query: 64 LTQQRPRWHRVVVQGPGPGPR 84
+ Q W ++G GP R
Sbjct: 111 TSLQ--TWVSPTIRGEGPPAR 129
>Glyma10g28770.1
Length = 258
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS-AEDLHVLDL 64
D H D++T +W R G PP+PR +H AT VG +VI GG G + DLHVLDL
Sbjct: 85 DTHILDLVTKEWFRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLHVLDL 144
Query: 65 TQQRPRWHRVVVQGPGPGPR 84
+ RW V+G P PR
Sbjct: 145 --RTMRWTSPTVKGDFPVPR 162
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 6 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGL-SAEDLHVLDL 64
DV C D+ WS++ GE P PR +H A VG +++ GG GL D H+LDL
Sbjct: 34 GDVLCLDLEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTN--GLKKVNDTHILDL 91
Query: 65 TQQRPRWHRVVVQGPGPGPR 84
+ W R +G P PR
Sbjct: 92 VTK--EWFRPKCEGTPPSPR 109
>Glyma16g17660.1
Length = 209
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 EPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
E P+P+AAHVA A+GTMVV+QGGIGP G S +DL+
Sbjct: 86 EFPSPQAAHVAAAIGTMVVLQGGIGPGGHSIDDLY 120
>Glyma20g22880.1
Length = 288
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS-AEDLHVLDL 64
D H D++T +W G PP+PR +H AT VG +VI GG G + DLHVLDL
Sbjct: 99 DTHILDLVTKEWICPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHVLDL 158
Query: 65 TQQRPRWHRVVVQGPGPGPR 84
+ RW VV+G P PR
Sbjct: 159 --RTMRWTSPVVKGDLPVPR 176
>Glyma04g32230.1
Length = 613
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 5 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 64
T VH +D L WS G PPTPR +H T +G + + GG + L DLH+LD
Sbjct: 45 TNQVHVFDTLKQSWSEPAIKGPPPTPRDSHSCTVIGDSLFVFGGTDGSKL-LNDLHILDT 103
Query: 65 TQQRPRWHRVVVQGPGPGPR 84
+ W V+G P R
Sbjct: 104 SSH--TWVFPTVRGEAPDAR 121
>Glyma03g39030.1
Length = 604
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 8 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS-AEDLHVLDLT 65
+H D++T +W R G PP+PR +H AT VG +VI GG G + DLH+LDL
Sbjct: 105 IHVLDLVTKEWVRPECKGTPPSPRESHTATLVGDERIVIFGGSGEGHANYLNDLHILDL- 163
Query: 66 QQRPRWHRVVVQGPGPGPR 84
+ W ++G P PR
Sbjct: 164 -RTMSWTSSELKGDFPVPR 181
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 1 LAGATADVHCYDVLT---NK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLS 55
G +H DVLT NK WS++T GE P PR +H A VG +++ GG
Sbjct: 43 FGGCCGGLHFCDVLTLDLNKMVWSKLTTTGEKPGPRDSHSAVFVGHKMIVFGGTN-GFKK 101
Query: 56 AEDLHVLDLTQQRPRWHRVVVQGPGPGPR 84
+HVLDL + W R +G P PR
Sbjct: 102 MNHIHVLDLVTK--EWVRPECKGTPPSPR 128
>Glyma03g39640.2
Length = 652
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLT 65
D+H D+ T W I G PP+PR+ H A V ++I GG G DLHVLDL
Sbjct: 320 DLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVDRYLLIFGG-GSHATCYNDLHVLDL- 377
Query: 66 QQRPRWHRVVVQGPGPGPR 84
Q W R G P PR
Sbjct: 378 -QTMEWSRPTQLGEIPSPR 395
>Glyma03g39640.1
Length = 660
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLT 65
D+H D+ T W I G PP+PR+ H A V ++I GG G DLHVLDL
Sbjct: 319 DLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVDRYLLIFGG-GSHATCYNDLHVLDL- 376
Query: 66 QQRPRWHRVVVQGPGPGPR 84
Q W R G P PR
Sbjct: 377 -QTMEWSRPTQLGEIPSPR 394
>Glyma19g42270.1
Length = 649
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLT 65
D+H D+ T W I G PP+PR+ H A V ++I GG G DLHVLDL
Sbjct: 317 DLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVERYLLIFGG-GSHATCYNDLHVLDL- 374
Query: 66 QQRPRWHRVVVQGPGPGPR 84
Q W R + G P PR
Sbjct: 375 -QTMEWSRPMQLGEIPTPR 392
>Glyma19g41600.1
Length = 319
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 8 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS-AEDLHVLDLT 65
+H D++T +W R G PP+PR +H AT VG +VI GG G + DLH+LDL
Sbjct: 71 IHILDLVTKEWVRPECKGNPPSPRESHTATLVGDERIVIFGGSGEGHANYLNDLHILDL- 129
Query: 66 QQRPRWHRVVVQGPGPGPR 84
+ W ++G P PR
Sbjct: 130 -RTMSWTSPELKGDLPIPR 147
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 1 LAGATADVHCYDVLT---NK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLS 55
G +H DVLT NK WS++T GE P PR +H A VG +++ GG
Sbjct: 9 FQGCCGGLHFCDVLTLDLNKMVWSKLTTTGEKPGPRDSHSAVLVGHKMIVFGGTN-GFKK 67
Query: 56 AEDLHVLDLTQQRPRWHRVVVQGPGPGPR 84
+H+LDL + W R +G P PR
Sbjct: 68 VNHIHILDLVTK--EWVRPECKGNPPSPR 94
>Glyma20g37940.1
Length = 659
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 1 LAGATAD------VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGL 54
+AG T D V +D+ W+ + +G+PP R T VGT +VI GG
Sbjct: 252 IAGHTKDPNESIQVKVFDLPNATWTTLKTYGKPPVSRGGQSVTFVGTSLVIFGGEDAKRT 311
Query: 55 SAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 84
DLH+LDL + W + G P PR
Sbjct: 312 LLNDLHILDL--ETMTWDEIDAVGVPPSPR 339
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLT 65
D+H D+ T W I G PP+PR+ H A V ++I GG G DLHVLD+
Sbjct: 315 DLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHVERYLLIFGG-GSHATCYNDLHVLDM- 372
Query: 66 QQRPRWHRVVVQGPGPGPR 84
Q W R G P PR
Sbjct: 373 -QTMEWSRPTQLGEIPTPR 390
>Glyma06g22320.1
Length = 613
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 5 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDL 64
T VH +D L WS G PPTPR +H T +G + + GG L DL +LD
Sbjct: 45 TNQVHVFDTLKQSWSEPAIKGPPPTPRDSHSCTVIGDNLFVFGGTDGTKL-LNDLQILDT 103
Query: 65 TQQRPRWHRVVVQGPGPGPR 84
+ W V+G P R
Sbjct: 104 SSN--TWVFPTVRGEAPDAR 121