Jatropha Genome Database

JcCB0590711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0590711.10 + phase: 0 /partial
         (256 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g26170.1                                                       402   e-112
Glyma04g36700.2                                                       402   e-112
Glyma04g36700.1                                                       402   e-112
Glyma15g36890.1                                                       399   e-111

>Glyma13g26170.1 
          Length = 949

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/234 (82%), Positives = 212/234 (90%), Gaps = 5/234 (2%)

Query: 1   INKLAAVRINGMVERLQQSQQHIRENVYHLFQQILSQRTSLFFNRHIDQIILCCFYGVAK 60
           I KL AVRI+GMVERLQ SQQ IRENVY LFQ+IL+Q TSLFFNRHIDQIILCCFYGVAK
Sbjct: 675 IIKLGAVRISGMVERLQLSQQ-IRENVYSLFQRILNQWTSLFFNRHIDQIILCCFYGVAK 733

Query: 61  ISKVNLTFREIIFNYRKQPQCKPQVFRSVFIDWSSARHNGRTGQDHVDIITFYNEIFIPA 120
           IS++NLTF+EI++NYRKQP CKPQVFRSVF+DWS AR NGRTGQ+H+DIITFYNEIFIP+
Sbjct: 734 ISQLNLTFKEIVYNYRKQPHCKPQVFRSVFVDWSLARRNGRTGQEHIDIITFYNEIFIPS 793

Query: 121 AKPLLVEVGSAGAITKASPTPEVNNNKDG---QCPASPKVSPFPSLPDMSPKKVSATHNV 177
            KPLLVE+G AG  TK+   PE+N N DG   QCP SPK+SPFP+LPDMSPKKVSATHNV
Sbjct: 794 VKPLLVELGPAGPTTKSDRIPEINKN-DGHLAQCPGSPKISPFPTLPDMSPKKVSATHNV 852

Query: 178 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 231
           YVSPLR+SKM+ALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG
Sbjct: 853 YVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 906


>Glyma04g36700.2 
          Length = 990

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/234 (82%), Positives = 212/234 (90%), Gaps = 5/234 (2%)

Query: 1   INKLAAVRINGMVERLQQSQQHIRENVYHLFQQILSQRTSLFFNRHIDQIILCCFYGVAK 60
           I KL AVRI+GMVERLQ SQQ IRENVY LFQ+IL+Q TSLFFNRHIDQIILCCFYGVAK
Sbjct: 716 IIKLGAVRISGMVERLQLSQQ-IRENVYSLFQRILNQWTSLFFNRHIDQIILCCFYGVAK 774

Query: 61  ISKVNLTFREIIFNYRKQPQCKPQVFRSVFIDWSSARHNGRTGQDHVDIITFYNEIFIPA 120
           IS++NLTF+EI++NYRKQP CKPQVFRSVF+DWS AR NGRTGQ+H+DIITFYNEIFIP+
Sbjct: 775 ISQLNLTFKEIVYNYRKQPHCKPQVFRSVFVDWSLARRNGRTGQEHIDIITFYNEIFIPS 834

Query: 121 AKPLLVEVGSAGAITKASPTPEVNNNKDG---QCPASPKVSPFPSLPDMSPKKVSATHNV 177
            KPLLVE+G AG  TK+   PEVN N DG   QCP SPK+SPFP+LPDMSPKKVSATHNV
Sbjct: 835 VKPLLVELGPAGPTTKSDRIPEVNKN-DGHLAQCPGSPKISPFPTLPDMSPKKVSATHNV 893

Query: 178 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 231
           YVSPLR+SKM+ALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG
Sbjct: 894 YVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 947


>Glyma04g36700.1 
          Length = 1014

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/234 (82%), Positives = 212/234 (90%), Gaps = 5/234 (2%)

Query: 1   INKLAAVRINGMVERLQQSQQHIRENVYHLFQQILSQRTSLFFNRHIDQIILCCFYGVAK 60
           I KL AVRI+GMVERLQ SQQ IRENVY LFQ+IL+Q TSLFFNRHIDQIILCCFYGVAK
Sbjct: 740 IIKLGAVRISGMVERLQLSQQ-IRENVYSLFQRILNQWTSLFFNRHIDQIILCCFYGVAK 798

Query: 61  ISKVNLTFREIIFNYRKQPQCKPQVFRSVFIDWSSARHNGRTGQDHVDIITFYNEIFIPA 120
           IS++NLTF+EI++NYRKQP CKPQVFRSVF+DWS AR NGRTGQ+H+DIITFYNEIFIP+
Sbjct: 799 ISQLNLTFKEIVYNYRKQPHCKPQVFRSVFVDWSLARRNGRTGQEHIDIITFYNEIFIPS 858

Query: 121 AKPLLVEVGSAGAITKASPTPEVNNNKDG---QCPASPKVSPFPSLPDMSPKKVSATHNV 177
            KPLLVE+G AG  TK+   PEVN N DG   QCP SPK+SPFP+LPDMSPKKVSATHNV
Sbjct: 859 VKPLLVELGPAGPTTKSDRIPEVNKN-DGHLAQCPGSPKISPFPTLPDMSPKKVSATHNV 917

Query: 178 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 231
           YVSPLR+SKM+ALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG
Sbjct: 918 YVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 971


>Glyma15g36890.1 
          Length = 1005

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/234 (82%), Positives = 209/234 (89%), Gaps = 4/234 (1%)

Query: 1   INKLAAVRINGMVERLQQSQQHIRENVYHLFQQILSQRTSLFFNRHIDQIILCCFYGVAK 60
           I KL AVRI+GMVERLQ SQQ IRENVY LFQ+IL+Q TSLFFN HIDQIILCCFYGVAK
Sbjct: 730 IIKLGAVRISGMVERLQLSQQ-IRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYGVAK 788

Query: 61  ISKVNLTFREIIFNYRKQPQCKPQVFRSVFIDWSSARHNGRTGQDHVDIITFYNEIFIPA 120
           IS++NLTF+EI++NYRKQP CK QVFRSVF+DWS AR NGRTGQDHVDIITFYNEIFIP+
Sbjct: 789 ISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITFYNEIFIPS 848

Query: 121 AKPLLVEVGSAGAITKASPTPEVNNNKDG---QCPASPKVSPFPSLPDMSPKKVSATHNV 177
            KPLLVE+G AG   K+   PEVNN  +G   QCP SPK+SPFP+LPDMSPKKVSATHNV
Sbjct: 849 VKPLLVELGPAGPTPKSDRIPEVNNKNEGHLAQCPGSPKISPFPTLPDMSPKKVSATHNV 908

Query: 178 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 231
           YVSPLR+SKM+ALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG
Sbjct: 909 YVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 962