Jatropha Genome Database

JcCB0590701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0590701.10 - phase: 0 /pseudo
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g04430.1                                                       107   2e-24
Glyma15g15480.1                                                       107   3e-24
Glyma17g03430.1                                                       105   1e-23
Glyma03g39210.1                                                        98   2e-21
Glyma20g38320.2                                                        97   3e-21
Glyma20g38320.1                                                        97   3e-21
Glyma10g29000.1                                                        97   3e-21
Glyma19g41770.1                                                        97   5e-21
Glyma20g38320.3                                                        96   7e-21
Glyma10g10030.1                                                        86   7e-18
Glyma01g09070.1                                                        82   1e-16
Glyma02g34530.1                                                        80   4e-16
Glyma07g37180.1                                                        80   5e-16
Glyma02g29940.1                                                        72   1e-13

>Glyma09g04430.1 
          Length = 531

 Score =  107 bits (268), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/53 (92%), Positives = 53/53 (100%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRP+ARTEVRRN+YKVAVDADEGRRRREDNMVEIRK+KREE+LQKKRREGL
Sbjct: 1  MSLRPNARTEVRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLQKKRREGL 53


>Glyma15g15480.1 
          Length = 531

 Score =  107 bits (267), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/53 (92%), Positives = 53/53 (100%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRP+ARTEVRRN+YKVAVDADEGRRRREDNMVEIRK+KREE+LQKKRREGL
Sbjct: 1  MSLRPNARTEVRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLQKKRREGL 53


>Glyma17g03430.1 
          Length = 530

 Score =  105 bits (262), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/76 (68%), Positives = 59/76 (77%), Gaps = 4/76 (5%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGLXXXXXXX 60
          MSLRP+ARTE+RRN+YKVAVDADEGRRRREDNMVEIRK+KREE+L KKRREGL       
Sbjct: 1  MSLRPNARTEIRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLLKKRREGL----QAQ 56

Query: 61 XXLTSSFTNSANDKKV 76
              +   NS  DKK+
Sbjct: 57 QQFPAPLQNSTVDKKL 72


>Glyma03g39210.1 
          Length = 532

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/55 (85%), Positives = 51/55 (92%), Gaps = 2/55 (3%)

Query: 1  MSLRPSA--RTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS RPSA  RTEVRRN+YKVAVDADEGRRRRED MVEIRK++REE+LQKKRREGL
Sbjct: 1  MSYRPSANARTEVRRNRYKVAVDADEGRRRREDTMVEIRKSRREESLQKKRREGL 55


>Glyma20g38320.2 
          Length = 532

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/55 (83%), Positives = 50/55 (90%), Gaps = 2/55 (3%)

Query: 1  MSLRPS--ARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS RPS  +RTEVRRN+YKVAVDADEGRRRRED MVEIRKN+REE+LQKKRREG 
Sbjct: 1  MSYRPSGNSRTEVRRNRYKVAVDADEGRRRREDTMVEIRKNRREESLQKKRREGF 55


>Glyma20g38320.1 
          Length = 532

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/55 (83%), Positives = 50/55 (90%), Gaps = 2/55 (3%)

Query: 1  MSLRPS--ARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS RPS  +RTEVRRN+YKVAVDADEGRRRRED MVEIRKN+REE+LQKKRREG 
Sbjct: 1  MSYRPSGNSRTEVRRNRYKVAVDADEGRRRREDTMVEIRKNRREESLQKKRREGF 55


>Glyma10g29000.1 
          Length = 532

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/55 (83%), Positives = 51/55 (92%), Gaps = 2/55 (3%)

Query: 1  MSLRPS--ARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS RPS  +RTEVRRN+YKVAVDA+EGRRRRED MVEIRKN+REE+LQKKRREGL
Sbjct: 1  MSYRPSGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGL 55


>Glyma19g41770.1 
          Length = 532

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/55 (85%), Positives = 50/55 (90%), Gaps = 2/55 (3%)

Query: 1  MSLRPSA--RTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS RPSA  RTEVRRN+YKVAVDADEGRRRRED MVEIRKN+REE+L KKRREGL
Sbjct: 1  MSYRPSANARTEVRRNRYKVAVDADEGRRRREDTMVEIRKNRREESLLKKRREGL 55


>Glyma20g38320.3 
          Length = 413

 Score = 96.3 bits (238), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/55 (83%), Positives = 50/55 (90%), Gaps = 2/55 (3%)

Query: 1  MSLRPS--ARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS RPS  +RTEVRRN+YKVAVDADEGRRRRED MVEIRKN+REE+LQKKRREG 
Sbjct: 1  MSYRPSGNSRTEVRRNRYKVAVDADEGRRRREDTMVEIRKNRREESLQKKRREGF 55


>Glyma10g10030.1 
          Length = 175

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 45/54 (83%), Gaps = 2/54 (3%)

Query: 2  SLRPSA--RTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          S RPSA  R EVRRN YKV VDADEGRRRRED MVEIRKN REE+LQKKR EGL
Sbjct: 3  SYRPSANARIEVRRNHYKVVVDADEGRRRREDTMVEIRKNHREESLQKKRCEGL 56


>Glyma01g09070.1 
          Length = 71

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 47/54 (87%), Gaps = 2/54 (3%)

Query: 2  SLRPSA--RTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          S RPSA  RTEVRRN+YKV VDADEG RR+ED MVEIRKN+REE+LQKKR EGL
Sbjct: 1  SYRPSANARTEVRRNRYKVVVDADEGHRRQEDTMVEIRKNRREESLQKKRCEGL 54


>Glyma02g34530.1 
          Length = 60

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/48 (83%), Positives = 45/48 (93%)

Query: 6  SARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          +ARTEVRRN+YKVA+DADEGRRRRED MVEI KN+REE+LQKKR EGL
Sbjct: 1  NARTEVRRNRYKVAMDADEGRRRREDTMVEIEKNRREESLQKKRCEGL 48


>Glyma07g37180.1 
          Length = 520

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/76 (57%), Positives = 49/76 (64%), Gaps = 14/76 (18%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGLXXXXXXX 60
          MSLRP+ARTEVRRN+YKVAVDADEGRRRREDNM          +L KKRREGL       
Sbjct: 1  MSLRPNARTEVRRNRYKVAVDADEGRRRREDNM----------SLLKKRREGL----QAH 46

Query: 61 XXLTSSFTNSANDKKV 76
            L +   NS  DK +
Sbjct: 47 QQLPAPLQNSTVDKNL 62


>Glyma02g29940.1 
          Length = 70

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 5/69 (7%)

Query: 9  TEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGLXXXXXXXXXLTSSFT 68
          TEVR N+YKVAVD+DEG RRR D M+EIRKN REE+L KKR EGL         + SS  
Sbjct: 1  TEVRWNRYKVAVDSDEGHRRRGDTMMEIRKNHREESLHKKRCEGL-----QSQQIPSSLH 55

Query: 69 NSANDKKVF 77
          ++  +KKV 
Sbjct: 56 STVIEKKVI 64