Jatropha Genome Database

JcCB0589561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0589561.10 - phase: 2 /partial
         (292 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g42270.1                                                       548   e-156
Glyma17g05980.1                                                       537   e-153
Glyma15g03120.1                                                       534   e-152
Glyma11g26030.1                                                       102   5e-22
Glyma09g12470.1                                                        68   1e-11

>Glyma13g42270.1 
          Length = 511

 Score =  548 bits (1412), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/294 (89%), Positives = 273/294 (92%), Gaps = 2/294 (0%)

Query: 1   KQRRAADENIRDEARRQNSASAANTFSAKYVPFNAGPDSR--EWYSLDEIVYRSRCGGLL 58
           K RR ADENIRDEARR N+    + FSAKYVPFNA P S   E YSLDEIVYRS+ GGLL
Sbjct: 39  KHRRPADENIRDEARRINAPHDHHLFSAKYVPFNADPSSSTTESYSLDEIVYRSQSGGLL 98

Query: 59  DVQHDMEALKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNS 118
           DVQHDM+ALK+FDG YWR+LFDSRVGKTTWPYGSGVWSKKEWVLPEI  DDIVSAFEGNS
Sbjct: 99  DVQHDMDALKRFDGEYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIHDDDIVSAFEGNS 158

Query: 119 NLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKQPVVGVGCAS 178
           NLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM +PVVGVGCAS
Sbjct: 159 NLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCAS 218

Query: 179 TGDTSAALSAYCASAGIPSIVFLPVNKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREV 238
           TGDTSAALSAYCASA IPSIVFLP NKIS+AQLVQPIANGAFVLSIDTDFDGCM+LIREV
Sbjct: 219 TGDTSAALSAYCASAAIPSIVFLPANKISLAQLVQPIANGAFVLSIDTDFDGCMQLIREV 278

Query: 239 TAELPIYLANSLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYK 292
           TAELPIYLANSLNSLRLEGQKTAAIEILQQF+W+VPDWVIVPGGNLGNIYAFYK
Sbjct: 279 TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYK 332


>Glyma17g05980.1 
          Length = 533

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 255/284 (89%), Positives = 268/284 (94%), Gaps = 2/284 (0%)

Query: 9   NIRDEARRQNSASAANTFSAKYVPFNAGPDSREWYSLDEIVYRSRCGGLLDVQHDMEALK 68
           NI+DEARR+   +A N F+AKYVPFNAG DS E YSLDEIVYRSR GGLLDVQHDMEAL 
Sbjct: 69  NIKDEARRR--PAAENDFTAKYVPFNAGFDSPETYSLDEIVYRSRSGGLLDVQHDMEALG 126

Query: 69  KFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGK 128
           +FDGAYWR LFDSRVGKTTWPYGSGVWSKKEWVLPEID DDIVSAFEGNSNLFWAERFGK
Sbjct: 127 RFDGAYWRALFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGK 186

Query: 129 QFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKQPVVGVGCASTGDTSAALSA 188
           QF+GMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM +PVVGVGCASTGDTSAALSA
Sbjct: 187 QFVGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSA 246

Query: 189 YCASAGIPSIVFLPVNKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREVTAELPIYLAN 248
           YCASAGIPSIVFLP NKIS AQL+QP++NG+ VLSI+TDFDGCMKLIRE+TAELPIYLAN
Sbjct: 247 YCASAGIPSIVFLPANKISTAQLIQPVSNGSLVLSINTDFDGCMKLIREITAELPIYLAN 306

Query: 249 SLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYK 292
           SLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYK
Sbjct: 307 SLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYK 350


>Glyma15g03120.1 
          Length = 519

 Score =  534 bits (1376), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 258/295 (87%), Positives = 269/295 (91%), Gaps = 3/295 (1%)

Query: 1   KQRRAADENIRDEARRQNSASAANTFSAKYVPFNAGPDSREWYS---LDEIVYRSRCGGL 57
           K RR ADENIRDEARR N+    + FSAKYVPFNA   S        LDEIVYRS+ GGL
Sbjct: 46  KHRRPADENIRDEARRINAPHDHHLFSAKYVPFNADSSSSSSTESYSLDEIVYRSQSGGL 105

Query: 58  LDVQHDMEALKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGN 117
           LDVQHDM+ALK+FDG YWR+LFDSRVGKTTWPYGSGVWSKKEWVLPEI  DDIVSAFEGN
Sbjct: 106 LDVQHDMDALKRFDGEYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIHDDDIVSAFEGN 165

Query: 118 SNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKQPVVGVGCA 177
           SNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM +PVVGVGCA
Sbjct: 166 SNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCA 225

Query: 178 STGDTSAALSAYCASAGIPSIVFLPVNKISMAQLVQPIANGAFVLSIDTDFDGCMKLIRE 237
           STGDTSAALSAYCASA IPSIVFLP NKIS+AQLVQPIANGAFVLSIDTDFDGCM+LIRE
Sbjct: 226 STGDTSAALSAYCASAAIPSIVFLPANKISLAQLVQPIANGAFVLSIDTDFDGCMQLIRE 285

Query: 238 VTAELPIYLANSLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYK 292
           VTAELPIYLANSLNSLRLEGQKTAAIEILQQF+W+VPDWVIVPGGNLGNIYAFYK
Sbjct: 286 VTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYK 340


>Glyma11g26030.1 
          Length = 77

 Score =  102 bits (254), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/84 (64%), Positives = 57/84 (67%), Gaps = 9/84 (10%)

Query: 45  LDEIVYRSRCGGLLDVQHDMEALKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPE 104
           LDEIVYRS    LL+VQHDME L  FD           +GK TW YGS VW+KK WVLPE
Sbjct: 1   LDEIVYRSHSDWLLNVQHDMEVLGSFD---------LHMGKMTWMYGSNVWNKKVWVLPE 51

Query: 105 IDSDDIVSAFEGNSNLFWAERFGK 128
           ID D IVS FEGNSNLFWAE F K
Sbjct: 52  IDLDYIVSTFEGNSNLFWAELFEK 75


>Glyma09g12470.1 
          Length = 52

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 36/45 (80%)

Query: 22 AANTFSAKYVPFNAGPDSREWYSLDEIVYRSRCGGLLDVQHDMEA 66
          A N F+ KY+PFN G +S E YSLD+IVYRSR  GLLD+QHDM++
Sbjct: 7  AENDFTVKYIPFNTGFNSLETYSLDKIVYRSRSSGLLDMQHDMDS 51