Jatropha Genome Database

JcCB0585631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0585631.10 + phase: 2 /TE/partial
         (322 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g43960.2                                                       177   2e-44
Glyma01g43960.1                                                       177   2e-44
Glyma11g01430.1                                                       171   7e-43
Glyma19g40510.1                                                        72   7e-13
Glyma03g37920.1                                                        70   3e-12
Glyma08g20670.1                                                        53   4e-07
Glyma07g11880.1                                                        51   1e-06
Glyma07g01260.1                                                        51   2e-06
Glyma07g01260.2                                                        51   2e-06
Glyma05g02590.1                                                        51   2e-06
Glyma17g09270.1                                                        50   4e-06

>Glyma01g43960.2 
          Length = 1104

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/148 (62%), Positives = 105/148 (70%), Gaps = 1/148 (0%)

Query: 175 FMNSMVLPEVEKLNNATITQSFDGXXXXXXXXXXXXRINGDQLKKSSTKSLGRIIPGEDS 234
           FMNSMVLPEVEKLNNA  +   D             +  G Q +K S KS+GRIIPGE+S
Sbjct: 339 FMNSMVLPEVEKLNNAVTSSLSDKAIDVKPKDKGNGQNRGAQSRKGSNKSIGRIIPGEES 398

Query: 235 DSEFVXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSVVDHSKIDYKPFRKNFYIEVKEISR 294
           DS++                 FMKRVKKTKAEKLS+VDHSKIDY+PF+KNFYIEVKEIS+
Sbjct: 399 DSDYADDEVEKDPLDEDDDE-FMKRVKKTKAEKLSLVDHSKIDYEPFKKNFYIEVKEISK 457

Query: 295 MTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           MTPEE A YRKQLELKIHGKDVPKP+K+
Sbjct: 458 MTPEEAAVYRKQLELKIHGKDVPKPIKS 485


>Glyma01g43960.1 
          Length = 1104

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/148 (62%), Positives = 105/148 (70%), Gaps = 1/148 (0%)

Query: 175 FMNSMVLPEVEKLNNATITQSFDGXXXXXXXXXXXXRINGDQLKKSSTKSLGRIIPGEDS 234
           FMNSMVLPEVEKLNNA  +   D             +  G Q +K S KS+GRIIPGE+S
Sbjct: 339 FMNSMVLPEVEKLNNAVTSSLSDKAIDVKPKDKGNGQNRGAQSRKGSNKSIGRIIPGEES 398

Query: 235 DSEFVXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSVVDHSKIDYKPFRKNFYIEVKEISR 294
           DS++                 FMKRVKKTKAEKLS+VDHSKIDY+PF+KNFYIEVKEIS+
Sbjct: 399 DSDYADDEVEKDPLDEDDDE-FMKRVKKTKAEKLSLVDHSKIDYEPFKKNFYIEVKEISK 457

Query: 295 MTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           MTPEE A YRKQLELKIHGKDVPKP+K+
Sbjct: 458 MTPEEAAVYRKQLELKIHGKDVPKPIKS 485


>Glyma11g01430.1 
          Length = 1047

 Score =  171 bits (434), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 93/149 (62%), Positives = 106/149 (71%), Gaps = 3/149 (2%)

Query: 175 FMNSMVLPEVEKLNNATITQSFDGXXXXXXXXXXXXRIN-GDQLKKSSTKSLGRIIPGED 233
           FMNSMVLPEVEKLNNA +T S  G              N G Q +K S KS+GRIIPGE+
Sbjct: 307 FMNSMVLPEVEKLNNA-VTSSLSGKAIDVKPKDKGNEQNRGAQSRKVSNKSIGRIIPGEE 365

Query: 234 SDSEFVXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSVVDHSKIDYKPFRKNFYIEVKEIS 293
           SDS++                 FMKRVKKTKAEKLS+VDHSKI Y+PF+KNFYIEVKE+S
Sbjct: 366 SDSDYADDEVEKDPLDEDDDE-FMKRVKKTKAEKLSLVDHSKIVYEPFKKNFYIEVKEVS 424

Query: 294 RMTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           +MTPEE A YRKQLELKIHGKDVPKP+K+
Sbjct: 425 KMTPEESAVYRKQLELKIHGKDVPKPIKS 453


>Glyma19g40510.1 
          Length = 768

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 44/63 (69%)

Query: 260 VKKTKAEKLSVVDHSKIDYKPFRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKP 319
           + K K E +  +DHS IDY+PF K+FY E   IS M+ ++V+ YRK L +++ G DVPKP
Sbjct: 165 IDKKKIEPIPALDHSSIDYEPFNKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKP 224

Query: 320 VKT 322
           +KT
Sbjct: 225 IKT 227


>Glyma03g37920.1 
          Length = 782

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 43/63 (68%)

Query: 260 VKKTKAEKLSVVDHSKIDYKPFRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKP 319
           + K K E +  +DHS IDY+PF K+FY E   IS M+ ++V+ YRK L +++ G DVPKP
Sbjct: 176 IDKKKIEPIPALDHSSIDYEPFTKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKP 235

Query: 320 VKT 322
           +K 
Sbjct: 236 IKA 238


>Glyma08g20670.1 
          Length = 507

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 281 FRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           F KNFYIE   +  MT  EV  YR+Q E+ + G+D+PKPVKT
Sbjct: 61  FEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKT 102


>Glyma07g11880.1 
          Length = 487

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 29/42 (69%)

Query: 281 FRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           F KNFYIE   +  MT  EV  YR+Q E+ + G+D+PKPVK+
Sbjct: 43  FEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKS 84


>Glyma07g01260.1 
          Length = 507

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 281 FRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           F KNFY+E   +  MT  EV  YR+Q E+ + G+D+PKPVK+
Sbjct: 61  FEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKS 102


>Glyma07g01260.2 
          Length = 496

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 281 FRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKPVKT 322
           F KNFY+E   +  MT  EV  YR+Q E+ + G+D+PKPVK+
Sbjct: 61  FEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKS 102


>Glyma05g02590.1 
          Length = 612

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 266 EKLSVVDHSKIDYK---PFRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKPVK 321
           + L+ +   K D+K   PF KNFY+E   +  M+ +EV  YR   E+ + G DVPKPV+
Sbjct: 123 DDLNNIALPKQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKPVR 181


>Glyma17g09270.1 
          Length = 602

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 266 EKLSVVDHSKIDYK---PFRKNFYIEVKEISRMTPEEVAAYRKQLELKIHGKDVPKPV 320
           + L+ +   K D+K   PF KNFY+E   +  M+ +EV  YR   E+ + G DVPKP+
Sbjct: 120 DDLNNIALPKQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKPI 177