Jatropha Genome Database
- JcCB0584071.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0584071.10 - phase: 1 /pseudo/partial
(304 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g36960.1 192 3e-49
Glyma06g44080.1 173 2e-43
Glyma12g33500.1 143 3e-34
Glyma12g13810.1 131 9e-31
Glyma07g26500.1 124 1e-28
Glyma03g33700.1 59 7e-09
Glyma10g05880.1 56 6e-08
Glyma19g36430.1 55 1e-07
Glyma13g42550.1 51 2e-06
Glyma20g24370.1 50 3e-06
Glyma10g42660.1 50 3e-06
Glyma20g24370.2 50 4e-06
Glyma11g15950.1 49 5e-06
Glyma12g07510.1 49 7e-06
>Glyma13g36960.1
Length = 492
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 164/258 (63%), Gaps = 39/258 (15%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALAEETARVNAA++I+ NY +M P+GP NM FSS FK
Sbjct: 192 RRDSFITHRAFCDALAEETARVNAASNIS--------NYSIMQNPLGP-NMTTQFSSFFK 242
Query: 89 PISSSNDQQTI--DQT-RRGLPLWVSQGPQGHEAII-NNSIQEIHRQLGSLTSSGTIFGQ 144
P S S DQ+ +QT +GL LW++Q Q HEA+ NN++ E H QLGS+TS I+G
Sbjct: 243 PNSCS-DQEPAPGNQTSNKGLSLWMTQTSQAHEAMANNNNLHEFH-QLGSVTSPTAIYGT 300
Query: 145 --DPLVSSSD---QYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPL------NEAAVQ 193
+PL S S+ +Q+NW +FGN ++SSN HQ ELTST SLPL + +Q
Sbjct: 301 SGNPLASCSNPPPSNYQLNW--VFGN--KLSSNGSHQ-ELTSTASLPLVNNIVKDNPNLQ 355
Query: 194 LASVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPS--FLGSFGLKCSSN 251
L SVPSLYS LLQKAAQ+G TS+DPS F GS GLKC+S
Sbjct: 356 LISVPSLYS----SQHQSHQASSANMSATALLQKAAQVGTTSSDPSSLFHGSIGLKCNSP 411
Query: 252 GQIQEGNKFCGLYGANNL 269
G Q+GNKFCG+YG++++
Sbjct: 412 G--QDGNKFCGMYGSSSV 427
>Glyma06g44080.1
Length = 474
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/250 (48%), Positives = 159/250 (63%), Gaps = 25/250 (10%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALAEETARVNAA+ IN+ N Y++MG +GP NMA HF SIFK
Sbjct: 175 RRDSFITHRAFCDALAEETARVNAASDINTSLGGNNIGYNIMGTSLGP-NMASHFPSIFK 233
Query: 89 PISSSNDQQTIDQTRRGLPLWVSQ--GPQGHEAI-INNSIQEIHRQLGSLTSS------G 139
P+SS++ +T +QT RGLPLW+SQ Q E I +N +++EIH+ + +SS G
Sbjct: 234 PVSSTD--ETSNQTSRGLPLWMSQITSSQAQERIMVNTNLREIHQLGSATSSSSGTIYDG 291
Query: 140 TIFGQDPLVSSSDQYHQINWPKIFGNNKQISSNNVHQE-ELTSTTSLPLNEAAVQLASVP 198
Q P + S+ Y Q++W +FG +IS+N+ +QE ++TTSLPL +++P
Sbjct: 292 NSILQCPNLPPSNNY-QLSW--VFGT--KISNNSNNQELTTSTTTSLPLGNT----SAIP 342
Query: 199 SLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPSFLGSFGLKCSSNGQIQEG- 257
S YS LLQKAAQIGATS+DPS+LGS GLKC +N Q Q+G
Sbjct: 343 SWYS-SQHQPQHQQACPSANMSATALLQKAAQIGATSSDPSWLGSLGLKCGNNSQGQDGN 401
Query: 258 -NKFCGLYGA 266
NK+ G+YG+
Sbjct: 402 NNKYSGMYGS 411
>Glyma12g33500.1
Length = 393
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 133/254 (52%), Gaps = 73/254 (28%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALAE+TARVNAA++I+ NY +M
Sbjct: 133 RRDSFITHRAFCDALAEQTARVNAASNIS--------NYSIM------------------ 166
Query: 89 PISSSNDQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQLGSLTSSGTIFGQ--DP 146
Q P HE ++NN+ QLGS+TS I+G +P
Sbjct: 167 -----------------------QNPAHHETMVNNNNLHEFYQLGSVTSPTAIYGTSGNP 203
Query: 147 LVSSSD---QYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPL------NEAAVQLASV 197
L S S+ +Q+NW + GN ++S+N HQE LTST SLPL + +QL SV
Sbjct: 204 LASCSNPPPSNYQLNW--VLGN--KLSTNGSHQE-LTSTASLPLVNNIVKDNPNLQLISV 258
Query: 198 PSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPS--FLGSFGLKCSSNGQIQ 255
PSLYS LLQKAAQIG TS+DPS FL S GLKC+S GQ
Sbjct: 259 PSLYSSQHQSHQTTSANMSATA----LLQKAAQIGTTSSDPSSLFLASIGLKCNSPGQ-- 312
Query: 256 EGNKFCGLYGANNL 269
+GNKFCG+YG++++
Sbjct: 313 DGNKFCGMYGSSSV 326
>Glyma12g13810.1
Length = 456
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 131/249 (52%), Gaps = 63/249 (25%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFC NMA HF SIFK
Sbjct: 198 RRDSFITHRAFCP------------------------------------NMATHFPSIFK 221
Query: 89 PISSSNDQQTIDQTRRGLPLWVSQ-GPQGHEAIINNSIQEIHRQLGSLTSS-GTIFGQDP 146
PISS+++ T +QT RGLPLW+ Q Q E ++N + +EIH QLGS TSS GT++G +
Sbjct: 222 PISSTDE--TSNQTSRGLPLWMGQTSSQAQETMVNTNFREIH-QLGSATSSSGTMYGGNS 278
Query: 147 LVSSSD----QYHQINWPKIFGNNKQISSNNVHQEELTSTT----SLPLNEAAVQLASVP 198
++ S+ +Q++W +FG SSNN +ELT+ T SLP+ + SVP
Sbjct: 279 ILQYSNLPPSNNYQLSW--VFGTKISNSSNN---QELTTNTTTTTSLPIGNS-----SVP 328
Query: 199 SLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPSFLGSFGLKC-SSNGQIQEG 257
SLY LLQKAAQIGATS+DPS+LGS GLKC +S GQ
Sbjct: 329 SLYC---SQHQPQQTCSSANMSATALLQKAAQIGATSSDPSWLGSLGLKCGNSQGQDGNN 385
Query: 258 NKFCGLYGA 266
NK+ +YG+
Sbjct: 386 NKYSDMYGS 394
>Glyma07g26500.1
Length = 307
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 123/242 (50%), Gaps = 59/242 (24%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
+RDSFITHRAFCDALAEETAR+N A+ IN+ N Y++MG +GP NMA HF SIFK
Sbjct: 55 QRDSFITHRAFCDALAEETARLNTASDINTFLGG-NIGYNIMGTSLGP-NMATHFPSIFK 112
Query: 89 PISSSNDQQTIDQTRRGLPLWVSQGPQ-GHEAIINNSIQEIHRQLGSLTSSGTIFGQDPL 147
P+SS+N+ +QT GLPLW+ H+ I NN
Sbjct: 113 PVSSTNE--ISNQTSWGLPLWMDSSTWFCHKLIRNN------------------------ 146
Query: 148 VSSSDQYHQINWPKIFGNNKQISSNNVHQEEL----TSTTSLPLNEAAVQLASVPSLYSG 203
+FG SSNN +EL T+TTSLP+ SVPSLY
Sbjct: 147 --------------VFGTKISNSSNN---QELTTSTTTTTSLPIGN-----TSVPSLY-- 182
Query: 204 XXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPSFLGSFGLKC-SSNGQIQEGNKFCG 262
LLQKAAQIGAT +DPS+LG+ GLKC ++ G NK+ G
Sbjct: 183 -FSQHQPQQTCSSANMSATTLLQKAAQIGATLSDPSWLGNLGLKCGNNQGHHGNNNKYSG 241
Query: 263 LY 264
+Y
Sbjct: 242 MY 243
>Glyma03g33700.1
Length = 514
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 48/236 (20%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPI-------------- 74
R+DSFITHRAFCDALA+E++R+ TS+ AST+ N+ A +
Sbjct: 180 RKDSFITHRAFCDALADESSRL---TSV----ASTSLNFKSEDATMINTQASLSTRGLIT 232
Query: 75 --GPNNMAQHFSSIFKPISSSNDQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQL 132
G N++Q F+ ++ DQQ R L LW++QG H INN +
Sbjct: 233 DHGMQNVSQFGPHGFRLMNMGTDQQ-----RPNLSLWLNQG--NHH--INNPLDV----- 278
Query: 133 GSLTSSGTIFGQDPLVSSSDQYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPLNEAAV 192
+L+SS + P V Q + IN + G++ S+ + +S +L +
Sbjct: 279 -ALSSSSSGL---PEVVHMAQAN-INNNALIGSSSVFSNFGMPASSNSSNPNLMGKKGDG 333
Query: 193 QLASVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGAT-STDPS-FLGSFGL 246
+ + S+YS LLQKAAQ+G+T ST+PS F GSFG+
Sbjct: 334 GASDLASMYS----ESQNKNSNSTSPMSATALLQKAAQMGSTRSTNPSIFSGSFGV 385
>Glyma10g05880.1
Length = 483
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSI-- 86
R+DSFITHRAFCDALAEE+AR+ A T +T N+ A Q+ S I
Sbjct: 175 RKDSFITHRAFCDALAEESARLTAVT-------TTTLNFKSEEA----QQSLQNVSGIPK 223
Query: 87 FKPISSSNDQQTIDQTRR-GLPLWVSQG-PQ 115
F P S D ++Q +R L LW++QG PQ
Sbjct: 224 FGPHSFRLDFNGMEQQQRPSLSLWLNQGNPQ 254
>Glyma19g36430.1
Length = 449
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 29 RRDSFITHRAFCDALAEETARVN--AATSINSLAAST---NFNYHLMGAPIGPNNMAQHF 83
R+DSFITHRAFCDALAEE++R+ A+TS+N ++ T N L + + N
Sbjct: 119 RKDSFITHRAFCDALAEESSRLTSVASTSLNFMSEDTTMMNTQASLSSSGL-INGQGMQS 177
Query: 84 SSIFKPISSSNDQQTIDQTRRGLPLWVSQG 113
S F P DQ R L LW++QG
Sbjct: 178 VSHFGPHGLRLMSMGTDQQRPNLSLWLNQG 207
>Glyma13g42550.1
Length = 480
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALAEE+AR + T I +A ST G I +++ Q
Sbjct: 206 RRDSFITHRAFCDALAEESAR--SVTGI--VANSTTQPTEAAGVVISSSSLHQDM----- 256
Query: 89 PISSSNDQQTIDQTRRG-LPLWVSQ 112
I +SN+ + + ++G +P W+ Q
Sbjct: 257 -IHASNNNFPLKKEQQGCIPHWLGQ 280
>Glyma20g24370.1
Length = 567
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALA+E+AR + S + + HL G+ NMA + S +
Sbjct: 184 RRDSFITHRAFCDALAQESARQPPSLSGGGIGS------HLYGSTT---NMALNLSQVGS 234
Query: 89 PISSSND 95
IS+ D
Sbjct: 235 QISTMQD 241
>Glyma10g42660.1
Length = 571
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALA+E+AR + S + + HL G+ NMA + S +
Sbjct: 185 RRDSFITHRAFCDALAQESARQPPSLSGGGIGS------HLYGSTT---NMALNLSQVGS 235
Query: 89 PISSSNDQQTIDQTRRG 105
I ++ Q + R G
Sbjct: 236 QIQDPSNAQPTELLRLG 252
>Glyma20g24370.2
Length = 502
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALA+E+AR + S + + HL G+ NMA + S +
Sbjct: 119 RRDSFITHRAFCDALAQESARQPPSLSGGGIGS------HLYGSTT---NMALNLSQVGS 169
Query: 89 PISSSND 95
IS+ D
Sbjct: 170 QISTMQD 176
>Glyma11g15950.1
Length = 504
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/22 (90%), Positives = 22/22 (100%)
Query: 29 RRDSFITHRAFCDALAEETARV 50
R+DSFITHRAFCDALAEE+ARV
Sbjct: 120 RKDSFITHRAFCDALAEESARV 141
>Glyma12g07510.1
Length = 434
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/22 (90%), Positives = 22/22 (100%)
Query: 29 RRDSFITHRAFCDALAEETARV 50
R+DSFITHRAFCDALAEE+ARV
Sbjct: 182 RKDSFITHRAFCDALAEESARV 203