Jatropha Genome Database

JcCB0582451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0582451.10 + phase: 1 /partial
         (229 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g23780.1                                                       286   8e-78
Glyma06g19740.1                                                       286   2e-77
Glyma04g35010.1                                                       110   8e-25
Glyma02g10280.1                                                        71   1e-12
Glyma18g52630.1                                                        70   1e-12
Glyma05g28630.1                                                        64   9e-11
Glyma08g11710.1                                                        64   1e-10
Glyma18g52630.2                                                        57   2e-08

>Glyma13g23780.1 
          Length = 455

 Score =  286 bits (733), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 147/239 (61%), Positives = 166/239 (69%), Gaps = 17/239 (7%)

Query: 5   TEGGSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNK 64
           T  G IAGEPGSEAH GYTFCGLA M+LI EVN LD+ RL+DWVVFRQG ECGFQGRTNK
Sbjct: 214 TYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNHLDLPRLVDWVVFRQGKECGFQGRTNK 273

Query: 65  LVDGCYSFWQGGVFAILQRLRSV-------SGEGVAFSDAEAGDYATDSTSEGEVTNGN- 116
           LVDGCYSFWQGG  A+LQRL S+       + +  A S       + D TS      G  
Sbjct: 274 LVDGCYSFWQGGAVALLQRLSSIINKQMEETSQIFAVSYVSEAKESLDGTSSHATCRGEH 333

Query: 117 --SSEADEPDHFKQ------GDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDF 168
             +SE+   D FK        +     P FHS+ALQQYILLC+QEQ+GG RDKPGK RD 
Sbjct: 334 EGTSESSSSD-FKNIAYKFINEWRAQEPLFHSIALQQYILLCAQEQEGGLRDKPGKRRDH 392

Query: 169 YHTCYCLSGLSVCQYSWSKDEHSPPPTRAVLGPYSNLLEPVHPLYNVVLKQYHEARDFF 227
           YHTCYCLSGLS+CQYSWSK   SPP    VLGPYSNLLEP+HPL+NVVL +Y EA +FF
Sbjct: 393 YHTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPYSNLLEPIHPLFNVVLGRYREAHEFF 451


>Glyma06g19740.1 
          Length = 455

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 166/238 (69%), Gaps = 15/238 (6%)

Query: 5   TEGGSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNK 64
           T  G IAGEPGSEAH GYTFCGLA M+LI EVNRLD+ RL++W VFRQG ECGFQGRTNK
Sbjct: 214 TYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNRLDLPRLVEWAVFRQGKECGFQGRTNK 273

Query: 65  LVDGCYSFWQGGVFAILQRLRSV-------SGEGVAFSDAEAGDYATDSTSEGEVTNGN- 116
           LVDGCYSFWQGG  A+LQRL S+       + +    SD      + D TS     +G  
Sbjct: 274 LVDGCYSFWQGGAVALLQRLSSIINKQMEEASQTFTISDVSEAKESLDGTSSHATCHGKH 333

Query: 117 --SSEADEPDHFKQG-----DHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFY 169
             +S++   D+   G     +     P FHS+ALQQYILLC+QEQ GG RDKPGK RD Y
Sbjct: 334 EGTSQSCSADYKSIGYNFINEWRAQEPLFHSIALQQYILLCAQEQAGGLRDKPGKRRDHY 393

Query: 170 HTCYCLSGLSVCQYSWSKDEHSPPPTRAVLGPYSNLLEPVHPLYNVVLKQYHEARDFF 227
           HTCYCLSGLS+CQYSWSK   SPP    VLGPYSNLLEP+HPL+NVVL++Y EA  FF
Sbjct: 394 HTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPYSNLLEPIHPLFNVVLERYREAHVFF 451


>Glyma04g35010.1 
          Length = 173

 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 80/168 (47%), Gaps = 63/168 (37%)

Query: 60  GRTNKLVDGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSE 119
            +TNKLVDGCYSFW GG+ A+LQRL S+                          N    E
Sbjct: 65  AKTNKLVDGCYSFWHGGIVALLQRLSSI-------------------------INKQMEE 99

Query: 120 ADEPDHFKQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLS 179
           A +   FK                       S EQ+G  RDKP K RD YHTCYCL+   
Sbjct: 100 ASQT--FK----------------------ISHEQEGELRDKPSKLRDHYHTCYCLN--- 132

Query: 180 VCQYSWSKDEHSPPPTRAVLGPYSNLLEPVHPLYNVVLKQYHEARDFF 227
                      SPP +  VLGPYS+LLE +HPL+NVVL ++ EA +FF
Sbjct: 133 -----------SPPLSYLVLGPYSDLLETIHPLFNVVLDRFREAHEFF 169


>Glyma02g10280.1 
          Length = 355

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 63/189 (33%)

Query: 14  PGSEAHVGYTFCGLAAMVLINEV-----------NRLDMARLIDWVVFRQGVECGFQGRT 62
           PG+E+H G T+C +A++ L+  +           + +D   L+DW++ RQG + GFQGR 
Sbjct: 207 PGAESHGGATYCAMASLRLMGFIEDNILSSCASSSLIDAPLLLDWILQRQGTDGGFQGRP 266

Query: 63  NKLVDGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADE 122
           NK  D CY+FW G V  IL         G  F D +                        
Sbjct: 267 NKSSDTCYAFWIGAVLRILG--------GFKFVDNK------------------------ 294

Query: 123 PDHFKQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQ 182
                              AL+ ++L C Q + GGF   PG+  D YH+ Y  +  S+ +
Sbjct: 295 -------------------ALRGFLLSC-QYKYGGFSKFPGEYPDLYHSYYGFTAFSLLE 334

Query: 183 YSWSKDEHS 191
            S  K   S
Sbjct: 335 ESGLKSLFS 343


>Glyma18g52630.1 
          Length = 347

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 63/185 (34%)

Query: 14  PGSEAHVGYTFCGLAAMVLINEV-----------NRLDMARLIDWVVFRQGVECGFQGRT 62
           PG+E+H G T+C +A++ L+  +           + +D   L+DW++ RQG + GFQGR 
Sbjct: 206 PGAESHGGATYCAIASLRLMGFIGDNILSSCASSSLIDAPLLLDWILQRQGTDGGFQGRP 265

Query: 63  NKLVDGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADE 122
           NK  D CY+FW G V  IL         G  F D                          
Sbjct: 266 NKSSDTCYAFWIGAVLRILG--------GCKFVD-------------------------- 291

Query: 123 PDHFKQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQ 182
                            S AL+ ++L C Q + GGF   PG+  D YH+ Y ++  S+ +
Sbjct: 292 -----------------SKALRGFLLSC-QYKYGGFGKFPGEYPDLYHSYYGVTAFSLLE 333

Query: 183 YSWSK 187
            S  K
Sbjct: 334 ESALK 338


>Glyma05g28630.1 
          Length = 334

 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 67/176 (38%), Gaps = 51/176 (28%)

Query: 8   GSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNKLVD 67
           G     PG E+H G  FC + A+ +   ++ +D   L  W+  RQ    G  GR  KL D
Sbjct: 186 GGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPD 245

Query: 68  GCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADEPDHFK 127
            CYS+W      ++ R+  +S E                                     
Sbjct: 246 VCYSWWVLSSLIMIDRVHWISKE------------------------------------- 268

Query: 128 QGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQY 183
                          L ++IL C   ++GG  D+P  A D +HT + ++GLS+ +Y
Sbjct: 269 --------------KLIKFILDCQDTENGGISDRPDDAVDVFHTFFGVAGLSLLEY 310


>Glyma08g11710.1 
          Length = 317

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 67/176 (38%), Gaps = 51/176 (28%)

Query: 8   GSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNKLVD 67
           G     PG E+H G  FC + A+ +   ++ +D   L  W+  RQ    G  GR  KL D
Sbjct: 165 GGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224

Query: 68  GCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADEPDHFK 127
            CYS+W      ++ R+  +S E                                     
Sbjct: 225 VCYSWWVLSSLIMIDRVHWISKE------------------------------------- 247

Query: 128 QGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQY 183
                          L ++IL C   ++GG  D+P  A D +HT + ++GLS+ +Y
Sbjct: 248 --------------KLIKFILDCQDTENGGISDRPDDAVDVFHTFFGVAGLSLLEY 289


>Glyma18g52630.2 
          Length = 290

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 54/188 (28%)

Query: 2   VRPTEGGSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVF--RQGVECGFQ 59
           ++  +G  I+   G E  + + +C      +++  + +D  +  D+++   RQG + GFQ
Sbjct: 146 LQQPDGSFISIHTGGETDLRFVYCAATICFMLDNWSGMDKEKTKDYILRCQRQGTDGGFQ 205

Query: 60  GRTNKLVDGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSE 119
           GR NK  D CY+FW G V  IL         G  F D                       
Sbjct: 206 GRPNKSSDTCYAFWIGAVLRILG--------GCKFVD----------------------- 234

Query: 120 ADEPDHFKQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLS 179
                               S AL+ ++L C Q + GGF   PG+  D YH+ Y ++  S
Sbjct: 235 --------------------SKALRGFLLSC-QYKYGGFGKFPGEYPDLYHSYYGVTAFS 273

Query: 180 VCQYSWSK 187
           + + S  K
Sbjct: 274 LLEESALK 281