Jatropha Genome Database

JcCB0580221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0580221.10 + phase: 0 
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g03860.1                                                        71   6e-13
Glyma07g36600.4                                                        70   1e-12
Glyma07g36600.3                                                        68   5e-12
Glyma07g36600.2                                                        68   8e-12
Glyma07g36600.1                                                        68   8e-12
Glyma15g14790.2                                                        67   9e-12
Glyma15g14790.1                                                        67   9e-12
Glyma17g04010.1                                                        66   3e-11
Glyma10g01430.1                                                        50   1e-06

>Glyma09g03860.1 
          Length = 256

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 17/193 (8%)

Query: 1   MDYKDG---DFDVDLENGLRVNAEDPHK----DYISVVKIQAKELLGKIYGVFVDGTIND 53
           MD++       + DLE+GL +  +D  K       S  K Q K L  K+ G F  G++  
Sbjct: 1   MDHRSAMDRATEFDLESGLPLIGDDSKKVSAPSTASSAK-QGKALFAKVSGGFAGGSVKG 59

Query: 54  EEGLNLCHNAPSSNGVSVEQVK-----LEGEKTVDHXXXXXXXXXXXXXXXXXXXXPPRP 108
           ++G +LC N PS + V  + ++     + G  + +                     PPRP
Sbjct: 60  DDGPSLCCNEPSLSEVYADVMRVTNKPMMGRDSANRAQQTPVREKRKKASNKKAPKPPRP 119

Query: 109 PTGPTLDAADQKLIKELTELAMLKRAKVERXXXXXXXX----XXXXXXXXXXTIAMVFTV 164
           P  P+LDAAD KLI+E++ELAMLKRA++ER                       +AM+FTV
Sbjct: 120 PKAPSLDAADHKLIREISELAMLKRARMERMKTLKKMKIAKSSAPSSSNASSLLAMIFTV 179

Query: 165 LFCLVIVFQGNSS 177
           +F +VI+ QG SS
Sbjct: 180 VFFVVIILQGMSS 192


>Glyma07g36600.4 
          Length = 205

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVV--KIQAKELLGKIYGVFVDGTINDEEGLNLCH 61
           KD D +VDLE+GL V  +D  KD +S    + Q K LL KI   FV   I  E+  +   
Sbjct: 7   KDEDTEVDLESGL-VLTDDESKD-VSTEGNRKQGKILLNKISCGFVGDCIKGEDRYSGFC 64

Query: 62  NAPSSNGVSVEQVKLEGE-KTVDHXXXXX-XXXXXXXXXXXXXXXPPRPPTGPTLDAADQ 119
                  VS++ VK+  +  +V++                     PPRPP  P+LDAADQ
Sbjct: 65  KESKLTVVSMDMVKVTNKLYSVEYAENNTPEKEKRKKSSNKKSPKPPRPPRAPSLDAADQ 124

Query: 120 KLIKELTELAMLKRAKVERXXXXXXXXXXXXXXXXXXT-IAMVFTVLFCLVIVFQGNSSI 178
           KLI+E+TELAMLKRA++ER                  + +A VFTV+FC+VI+ QGN   
Sbjct: 125 KLIREITELAMLKRARIERMKALKKMKVAKASSSSSSSMLATVFTVVFCIVILLQGN--- 181

Query: 179 PLTRVDNGSHS 189
            +  + N  H+
Sbjct: 182 -ICNISNSYHA 191


>Glyma07g36600.3 
          Length = 228

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 91/178 (51%), Gaps = 5/178 (2%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISV-VKIQAKELLGKIYGVFVDGTINDEEGLNLCHN 62
           KD D +VDLE+GL V  +D  KD  +   + Q K LL KI   FV   I  E+  +    
Sbjct: 7   KDEDTEVDLESGL-VLTDDESKDVSTEGNRKQGKILLNKISCGFVGDCIKGEDRYSGFCK 65

Query: 63  APSSNGVSVEQVKLEGE-KTVDHXXXXX-XXXXXXXXXXXXXXXPPRPPTGPTLDAADQK 120
                 VS++ VK+  +  +V++                     PPRPP  P+LDAADQK
Sbjct: 66  ESKLTVVSMDMVKVTNKLYSVEYAENNTPEKEKRKKSSNKKSPKPPRPPRAPSLDAADQK 125

Query: 121 LIKELTELAMLKRAKVERXXX-XXXXXXXXXXXXXXXTIAMVFTVLFCLVIVFQGNSS 177
           LI+E+TELAMLKRA++ER                    +A VFTV+FC+VI+ QG SS
Sbjct: 126 LIREITELAMLKRARIERMKALKKMKVAKASSSSSSSMLATVFTVVFCIVILLQGMSS 183


>Glyma07g36600.2 
          Length = 247

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 91/178 (51%), Gaps = 5/178 (2%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVV-KIQAKELLGKIYGVFVDGTINDEEGLNLCHN 62
           KD D +VDLE+GL V  +D  KD  +   + Q K LL KI   FV   I  E+  +    
Sbjct: 7   KDEDTEVDLESGL-VLTDDESKDVSTEGNRKQGKILLNKISCGFVGDCIKGEDRYSGFCK 65

Query: 63  APSSNGVSVEQVKLEGE-KTVDHXXXXX-XXXXXXXXXXXXXXXPPRPPTGPTLDAADQK 120
                 VS++ VK+  +  +V++                     PPRPP  P+LDAADQK
Sbjct: 66  ESKLTVVSMDMVKVTNKLYSVEYAENNTPEKEKRKKSSNKKSPKPPRPPRAPSLDAADQK 125

Query: 121 LIKELTELAMLKRAKVERXXX-XXXXXXXXXXXXXXXTIAMVFTVLFCLVIVFQGNSS 177
           LI+E+TELAMLKRA++ER                    +A VFTV+FC+VI+ QG SS
Sbjct: 126 LIREITELAMLKRARIERMKALKKMKVAKASSSSSSSMLATVFTVVFCIVILLQGMSS 183


>Glyma07g36600.1 
          Length = 247

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 91/178 (51%), Gaps = 5/178 (2%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVV-KIQAKELLGKIYGVFVDGTINDEEGLNLCHN 62
           KD D +VDLE+GL V  +D  KD  +   + Q K LL KI   FV   I  E+  +    
Sbjct: 7   KDEDTEVDLESGL-VLTDDESKDVSTEGNRKQGKILLNKISCGFVGDCIKGEDRYSGFCK 65

Query: 63  APSSNGVSVEQVKLEGE-KTVDHXXXXX-XXXXXXXXXXXXXXXPPRPPTGPTLDAADQK 120
                 VS++ VK+  +  +V++                     PPRPP  P+LDAADQK
Sbjct: 66  ESKLTVVSMDMVKVTNKLYSVEYAENNTPEKEKRKKSSNKKSPKPPRPPRAPSLDAADQK 125

Query: 121 LIKELTELAMLKRAKVERXXX-XXXXXXXXXXXXXXXTIAMVFTVLFCLVIVFQGNSS 177
           LI+E+TELAMLKRA++ER                    +A VFTV+FC+VI+ QG SS
Sbjct: 126 LIREITELAMLKRARIERMKALKKMKVAKASSSSSSSMLATVFTVVFCIVILLQGMSS 183


>Glyma15g14790.2 
          Length = 222

 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 17/140 (12%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVVKIQAKELLGKIYGVFVDGTINDEEGLNLCHNA 63
           KDGD +VDLE+GL +  +D            +K L  K+ G F  G++  ++G +LC N 
Sbjct: 7   KDGDTEVDLESGLPLIEDD------------SKTLFAKVSGGFAGGSVKGDDGPSLCCNE 54

Query: 64  PSSNGVS-----VEQVKLEGEKTVDHXXXXXXXXXXXXXXXXXXXXPPRPPTGPTLDAAD 118
           PS + VS     V    + G  + +                     PPRPP  P+LDAAD
Sbjct: 55  PSLSEVSADVMIVTNKPMMGRDSANRAQQTPVREKRKKASNKKAPKPPRPPQAPSLDAAD 114

Query: 119 QKLIKELTELAMLKRAKVER 138
            KLI+E++ELAMLKRA++ER
Sbjct: 115 NKLIREISELAMLKRARIER 134


>Glyma15g14790.1 
          Length = 221

 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 17/140 (12%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVVKIQAKELLGKIYGVFVDGTINDEEGLNLCHNA 63
           KDGD +VDLE+GL +  +D            +K L  K+ G F  G++  ++G +LC N 
Sbjct: 7   KDGDTEVDLESGLPLIEDD------------SKTLFAKVSGGFAGGSVKGDDGPSLCCNE 54

Query: 64  PSSNGVS-----VEQVKLEGEKTVDHXXXXXXXXXXXXXXXXXXXXPPRPPTGPTLDAAD 118
           PS + VS     V    + G  + +                     PPRPP  P+LDAAD
Sbjct: 55  PSLSEVSADVMIVTNKPMMGRDSANRAQQTPVREKRKKASNKKAPKPPRPPQAPSLDAAD 114

Query: 119 QKLIKELTELAMLKRAKVER 138
            KLI+E++ELAMLKRA++ER
Sbjct: 115 NKLIREISELAMLKRARIER 134


>Glyma17g04010.1 
          Length = 263

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 86/187 (45%), Gaps = 3/187 (1%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVVKIQAKELLGKIYGVFVDGTINDEEGLNLCHNA 63
           KD D +VDLE+GL +   +           Q K +L KI   F    I  E+  + C   
Sbjct: 7   KDEDAEVDLESGLVLTDYESKDVSTQGNTKQGKIILTKISCGFAGDCIKGEDRYSGCCKE 66

Query: 64  PSSNGVSVEQVKLEGE-KTVDHXXXXX-XXXXXXXXXXXXXXXPPRPPTGPTLDAADQKL 121
                VS++ VK+  +  +V++                     PPRPP  P+ D ADQKL
Sbjct: 67  SKLTVVSMDMVKVTNKLYSVEYAENNTPEKEKRKMSSNKKAPKPPRPPRAPSWDVADQKL 126

Query: 122 IKELTELAMLKRAKVER-XXXXXXXXXXXXXXXXXXTIAMVFTVLFCLVIVFQGNSSIPL 180
           I+E+TELAMLKRA++ER                   T AMVFTV+FC+V++ Q    I  
Sbjct: 127 IREITELAMLKRARIERMKALKKMKAAKASSSSSSSTFAMVFTVVFCIVVLLQATERIIF 186

Query: 181 TRVDNGS 187
             +D  S
Sbjct: 187 HSLDAFS 193


>Glyma10g01430.1 
          Length = 241

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 79/184 (42%), Gaps = 14/184 (7%)

Query: 4   KDGDFDVDLENGLRVNAEDPHKDYISVVKIQAKELLGKIY-GVF-VDGTINDEEGLNLCH 61
           ++ D + DLE G   + ED   D + V   ++K   G  + G+  VDG+   + G   C 
Sbjct: 7   REKDVEFDLECGGNSSDEDVGND-LYVSDRESKGAFGWAWNGILNVDGSYKGKSGTESCS 65

Query: 62  NAPSSNGVSV---EQVKLEGEKT-VDHXXXXXXXXXXXXXXX----XXXXXPPRPPTGPT 113
           N+  S  V V     V+L  +K  V H                        PP PP GP+
Sbjct: 66  NSAKSGDVVVMDENNVELLVDKGFVQHQFSNVNGNHAKQKTKLFIPKKPPKPPLPPRGPS 125

Query: 114 LDAADQKLIKELTELAMLKRAKVERXXXXXXXXXXXXXXXXXXT---IAMVFTVLFCLVI 170
           LDA DQK ++EL ELA+ KRA+V++                       AMV TV F LVI
Sbjct: 126 LDAGDQKFMEELAELALQKRARVKKMKAVRKMKASKSSSSSSTYTSLYAMVITVFFFLVI 185

Query: 171 VFQG 174
           +  G
Sbjct: 186 ILHG 189