Jatropha Genome Database

JcCB0578941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0578941.10 - phase: 1 /pseudo/partial
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g34960.2                                                       117   8e-27
Glyma05g34960.1                                                       117   9e-27
Glyma05g34960.3                                                       117   9e-27
Glyma05g34960.6                                                       117   9e-27
Glyma05g34960.7                                                       117   1e-26
Glyma08g04770.1                                                       110   7e-25
Glyma08g04770.4                                                       110   9e-25
Glyma09g22270.1                                                       109   1e-24
Glyma09g30460.1                                                        83   1e-16
Glyma05g34960.5                                                        75   3e-14
Glyma05g34960.4                                                        75   4e-14
Glyma08g04770.2                                                        74   1e-13
Glyma08g04770.3                                                        72   3e-13

>Glyma05g34960.2 
          Length = 242

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 9/147 (6%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EKAQAI+ LAGN  S +SNMAQP +QV  P SK  A    PVSQ  
Sbjct: 66  FYAGTVNIFDDISAEKAQAIMLLAGNSLSAASNMAQPNVQV--PISKLGAGAGVPVSQPA 123

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 124 NTSPGSGLSSPLSVSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 177

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 178 SATTMLTSAVPQARKASLARFLEKRKE 204


>Glyma05g34960.1 
          Length = 371

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 9/147 (6%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EKAQAI+ LAGN  S +SNMAQP +QV  P SK  A    PVSQ  
Sbjct: 195 FYAGTVNIFDDISAEKAQAIMLLAGNSLSAASNMAQPNVQV--PISKLGAGAGVPVSQPA 252

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 253 NTSPGSGLSSPLSVSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 306

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 307 SATTMLTSAVPQARKASLARFLEKRKE 333


>Glyma05g34960.3 
          Length = 368

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 9/147 (6%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EKAQAI+ LAGN  S +SNMAQP +QV  P SK  A    PVSQ  
Sbjct: 192 FYAGTVNIFDDISAEKAQAIMLLAGNSLSAASNMAQPNVQV--PISKLGAGAGVPVSQPA 249

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 250 NTSPGSGLSSPLSVSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 303

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 304 SATTMLTSAVPQARKASLARFLEKRKE 330


>Glyma05g34960.6 
          Length = 369

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 9/147 (6%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EKAQAI+ LAGN  S +SNMAQP +QV  P SK  A    PVSQ  
Sbjct: 193 FYAGTVNIFDDISAEKAQAIMLLAGNSLSAASNMAQPNVQV--PISKLGAGAGVPVSQPA 250

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 251 NTSPGSGLSSPLSVSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 304

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 305 SATTMLTSAVPQARKASLARFLEKRKE 331


>Glyma05g34960.7 
          Length = 338

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/147 (48%), Positives = 85/147 (57%), Gaps = 9/147 (6%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EKAQAI+ LAGN  S +SNMAQP +QV  P SK  A    PVSQ  
Sbjct: 162 FYAGTVNIFDDISAEKAQAIMLLAGNSLSAASNMAQPNVQV--PISKLGAGAGVPVSQPA 219

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 220 NTSPGSGLSSPLSVSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 273

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 274 SATTMLTSAVPQARKASLARFLEKRKE 300


>Glyma08g04770.1 
          Length = 369

 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 82/147 (55%), Gaps = 14/147 (9%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVNV+DDIS EKAQAI+ LAGN  S  SNMAQPK+QV    SK    D  PVSQ  
Sbjct: 201 FYAGTVNVFDDISAEKAQAIMLLAGNSLSAGSNMAQPKVQVLV--SKLAVGDGVPVSQPA 258

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                            T K+TG  TTPV  +E P+I      V
Sbjct: 259 NTSPGSGLSSPLSVSSHTGIQSGSGSTS-----TDKTTGVPTTPVCNVEPPKI------V 307

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 308 SATTMLTSAVPQARKASLARFLEKRKE 334


>Glyma08g04770.4 
          Length = 348

 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 82/147 (55%), Gaps = 14/147 (9%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVNV+DDIS EKAQAI+ LAGN  S  SNMAQPK+QV    SK    D  PVSQ  
Sbjct: 201 FYAGTVNVFDDISAEKAQAIMLLAGNSLSAGSNMAQPKVQVLV--SKLAVGDGVPVSQPA 258

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                            T K+TG  TTPV  +E P+I      V
Sbjct: 259 NTSPGSGLSSPLSVSSHTGIQSGSGSTS-----TDKTTGVPTTPVCNVEPPKI------V 307

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 308 SATTMLTSAVPQARKASLARFLEKRKE 334


>Glyma09g22270.1 
          Length = 319

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 85/147 (57%), Gaps = 11/147 (7%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVNV++DISPEKAQAI+ LAGNG S  SN A P   VQAP  K    D  PVSQ  
Sbjct: 147 FYAGTVNVFEDISPEKAQAIMLLAGNGLSAGSNEASP--NVQAPCLKLAVGDGVPVSQ-- 202

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAK-STGTTTPVSKLESPRIASTMGSV 160
                                        +E L AK S GTT+ V+K+E+P++ +T    
Sbjct: 203 PIPPCSGLSSPSSVSSHTGSPSGSGSSSNDEFLAAKTSGGTTSSVNKVETPKVVNT---- 258

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
             TTM+ SAVPQARKASLARFLEKRKE
Sbjct: 259 --TTMLTSAVPQARKASLARFLEKRKE 283


>Glyma09g30460.1 
          Length = 386

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 75/146 (51%), Gaps = 5/146 (3%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AG+V VYDDISPEKA+AI+ +AGNG + +  M  P +++Q   S P   D   +SQ  
Sbjct: 202 FYAGSVCVYDDISPEKAKAIMLMAGNGYTPTEKMELPTVKLQPAISIPSKDDGFMISQ-- 259

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTG-TTTPVSKLESPRIASTMGSV 160
                                        +EI   +  G +T P + LESP I S +GS 
Sbjct: 260 -SYPPSTFPTPLPLTSHVNSQPGGGSSSNKEISIIRQVGPSTAPTNHLESPIIGS-IGSA 317

Query: 161 AATTMIPSAVPQARKASLARFLEKRK 186
           +     P  +PQARKASLARFLEKRK
Sbjct: 318 SKEKAQPVCLPQARKASLARFLEKRK 343


>Glyma05g34960.5 
          Length = 345

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 71/147 (48%), Gaps = 33/147 (22%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EK       AG G  +S          Q  ++ P +   SP+S   
Sbjct: 193 FYAGTVNIFDDISAEKVPISKLGAGAGVPVS----------QPANTSPGSGLSSPLS--- 239

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 240 -------------VSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 280

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 281 SATTMLTSAVPQARKASLARFLEKRKE 307


>Glyma05g34960.4 
          Length = 314

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 71/147 (48%), Gaps = 33/147 (22%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVN++DDIS EK       AG G  +S          Q  ++ P +   SP+S   
Sbjct: 162 FYAGTVNIFDDISAEKVPISKLGAGAGVPVS----------QPANTSPGSGLSSPLS--- 208

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                        +E L AK+TG   TP+  +E P++      V
Sbjct: 209 -------------VSSHTGVQSGSGLTSTDEFLAAKTTGVPNTPICNVEPPKV------V 249

Query: 161 AATTMIPSAVPQARKASLARFLEKRKE 187
           +ATTM+ SAVPQARKASLARFLEKRKE
Sbjct: 250 SATTMLTSAVPQARKASLARFLEKRKE 276


>Glyma08g04770.2 
          Length = 349

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 64/130 (49%), Gaps = 14/130 (10%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVNV+DDIS EKAQAI+ LAGN  S  SNMAQPK+QV    SK    D  PVSQ  
Sbjct: 201 FYAGTVNVFDDISAEKAQAIMLLAGNSLSAGSNMAQPKVQVLV--SKLAVGDGVPVSQPA 258

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                            T K+TG  TTPV  +E P+I      V
Sbjct: 259 NTSPGSGLSSPLSVSSHTGIQSGSGSTS-----TDKTTGVPTTPVCNVEPPKI------V 307

Query: 161 AATTMIPSAV 170
           +ATTM+ S +
Sbjct: 308 SATTMLTSGM 317


>Glyma08g04770.3 
          Length = 316

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 63/128 (49%), Gaps = 14/128 (10%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AGTVNV+DDIS EKAQAI+ LAGN  S  SNMAQPK+QV    SK    D  PVSQ  
Sbjct: 201 FYAGTVNVFDDISAEKAQAIMLLAGNSLSAGSNMAQPKVQVLV--SKLAVGDGVPVSQPA 258

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGT-TTPVSKLESPRIASTMGSV 160
                                            T K+TG  TTPV  +E P+I      V
Sbjct: 259 NTSPGSGLSSPLSVSSHTGIQSGSGSTS-----TDKTTGVPTTPVCNVEPPKI------V 307

Query: 161 AATTMIPS 168
           +ATTM+ S
Sbjct: 308 SATTMLTS 315