Jatropha Genome Database

JcCB0574131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0574131.10 - phase: 2 /partial
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g39050.1                                                       122   1e-28
Glyma13g26280.1                                                       119   9e-28
Glyma19g31050.4                                                        99   2e-21
Glyma19g31050.3                                                        99   2e-21
Glyma19g31050.1                                                        99   2e-21
Glyma03g28320.1                                                        97   5e-21
Glyma19g31050.2                                                        94   5e-20
Glyma03g28320.2                                                        79   1e-15

>Glyma20g39050.1 
          Length = 444

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 84/124 (67%), Gaps = 6/124 (4%)

Query: 3   EGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNKSN 62
           EGSAI S+ V DF    +SV + +ED V L  N+VF+ +KVSSQ +S  P+ +  F+K  
Sbjct: 17  EGSAIDSFCVFDFD---QSVGYRIEDCVALRGNSVFDSLKVSSQTISRGPVEVDSFDKLP 73

Query: 63  TSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADTDD 122
           TS N NP  +Q E QRL L+K Q  NLVS   G+TE+  ES MADASPRTDISTD DTDD
Sbjct: 74  TSLNKNPLTSQTERQRLQLQKVQLSNLVS---GDTEHQEESAMADASPRTDISTDVDTDD 130

Query: 123 KNQR 126
           KN R
Sbjct: 131 KNPR 134


>Glyma13g26280.1 
          Length = 469

 Score =  119 bits (298), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 81/123 (65%), Gaps = 3/123 (2%)

Query: 3   EGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNKSN 62
           EG+ I S+RV DFG F +S  +H+EDAV+LS N V+N +KV+SQ +S   +HI    +  
Sbjct: 38  EGNTIDSFRVSDFGAFDQS--YHIEDAVDLSGNPVYNSLKVNSQTISPGSVHISSLGQLP 95

Query: 63  TSFNINPSAAQVES-QRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADTD 121
            S   +P   Q E   RL L+K Q  N  +I  GNT+NW ES MADASPRTDISTD DTD
Sbjct: 96  ISLEKSPLTNQTEPPHRLRLQKVQSSNPGTILVGNTDNWEESTMADASPRTDISTDGDTD 155

Query: 122 DKN 124
           DKN
Sbjct: 156 DKN 158


>Glyma19g31050.4 
          Length = 459

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 3/126 (2%)

Query: 1   GIEGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNK 60
            +E + +H  R+ +FGT ++S+ F +ED + LS N +FN +K +SQA+ +D +  G  NK
Sbjct: 36  AMEATNVHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGAD-IQFGALNK 94

Query: 61  SNTSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADT 120
           S  + +IN SAA   SQ L L+K+ Q  L S S G  ENWGE+N+ADASPRTD ++  DT
Sbjct: 95  SIATSDINLSAAIAGSQALVLQKDSQPTLASTSAGR-ENWGETNLADASPRTD-TSTDDT 152

Query: 121 DDKNQR 126
           +DKNQR
Sbjct: 153 EDKNQR 158


>Glyma19g31050.3 
          Length = 459

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 3/126 (2%)

Query: 1   GIEGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNK 60
            +E + +H  R+ +FGT ++S+ F +ED + LS N +FN +K +SQA+ +D +  G  NK
Sbjct: 36  AMEATNVHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGAD-IQFGALNK 94

Query: 61  SNTSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADT 120
           S  + +IN SAA   SQ L L+K+ Q  L S S G  ENWGE+N+ADASPRTD ++  DT
Sbjct: 95  SIATSDINLSAAIAGSQALVLQKDSQPTLASTSAGR-ENWGETNLADASPRTD-TSTDDT 152

Query: 121 DDKNQR 126
           +DKNQR
Sbjct: 153 EDKNQR 158


>Glyma19g31050.1 
          Length = 459

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 3/126 (2%)

Query: 1   GIEGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNK 60
            +E + +H  R+ +FGT ++S+ F +ED + LS N +FN +K +SQA+ +D +  G  NK
Sbjct: 36  AMEATNVHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGAD-IQFGALNK 94

Query: 61  SNTSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADT 120
           S  + +IN SAA   SQ L L+K+ Q  L S S G  ENWGE+N+ADASPRTD ++  DT
Sbjct: 95  SIATSDINLSAAIAGSQALVLQKDSQPTLASTSAGR-ENWGETNLADASPRTD-TSTDDT 152

Query: 121 DDKNQR 126
           +DKNQR
Sbjct: 153 EDKNQR 158


>Glyma03g28320.1 
          Length = 460

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 83/126 (65%), Gaps = 3/126 (2%)

Query: 1   GIEGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNK 60
            +E +  H  R+ +FGT ++S+ F +ED + LS N +FN +K +SQA+ +D +  G  NK
Sbjct: 37  AMEATNAHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGAD-IQFGALNK 95

Query: 61  SNTSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADT 120
           S  + +IN SAA   SQ L  +K+ Q  L S S G  ENWGE+NMADASPRTD ++  DT
Sbjct: 96  SIATSDINLSAAIAASQALVFQKDSQPTLASTSAGR-ENWGETNMADASPRTD-TSTDDT 153

Query: 121 DDKNQR 126
           +DKNQR
Sbjct: 154 EDKNQR 159


>Glyma19g31050.2 
          Length = 425

 Score = 93.6 bits (231), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/127 (47%), Positives = 85/127 (66%), Gaps = 5/127 (3%)

Query: 2   IEGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNK- 60
           +E + +H  R+ +FGT ++S+ F +ED + LS N +FN +K +SQA+ +D +  G  NK 
Sbjct: 1   MEATNVHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGAD-IQFGALNKM 59

Query: 61  -SNTSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDAD 119
            S  + +IN SAA   SQ L L+K+ Q  L S S G  ENWGE+N+ADASPRTD ++  D
Sbjct: 60  QSIATSDINLSAAIAGSQALVLQKDSQPTLASTSAGR-ENWGETNLADASPRTD-TSTDD 117

Query: 120 TDDKNQR 126
           T+DKNQR
Sbjct: 118 TEDKNQR 124


>Glyma03g28320.2 
          Length = 443

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 20/126 (15%)

Query: 1   GIEGSAIHSYRVCDFGTFKRSVAFHLEDAVELSSNTVFNPVKVSSQAVSSDPLHIGPFNK 60
            +E +  H  R+ +FGT ++S+ F +ED + LS N +FN +K +SQA+ +D +  G  NK
Sbjct: 37  AMEATNAHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGAD-IQFGALNK 95

Query: 61  SNTSFNINPSAAQVESQRLSLEKNQQLNLVSISGGNTENWGESNMADASPRTDISTDADT 120
           +                 L  +K+ Q  L S S G  ENWGE+NMADASPRTD ++  DT
Sbjct: 96  A-----------------LVFQKDSQPTLASTSAGR-ENWGETNMADASPRTD-TSTDDT 136

Query: 121 DDKNQR 126
           +DKNQR
Sbjct: 137 EDKNQR 142