Jatropha Genome Database

JcCB0573121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0573121.10 + phase: 0 /partial
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g10760.1                                                        55   2e-08
Glyma17g14160.1                                                        54   4e-08
Glyma05g01130.1                                                        52   1e-07
Glyma02g11780.1                                                        52   2e-07
Glyma16g05840.1                                                        52   2e-07
Glyma19g26560.1                                                        52   2e-07
Glyma12g28970.1                                                        52   2e-07
Glyma16g00580.1                                                        51   3e-07
Glyma05g03610.1                                                        50   6e-07
Glyma20g12090.1                                                        50   6e-07
Glyma08g41070.1                                                        49   1e-06
Glyma07g08710.1                                                        49   1e-06
Glyma18g15410.1                                                        49   1e-06
Glyma06g20660.1                                                        49   2e-06
Glyma20g29330.1                                                        48   3e-06
Glyma10g38510.1                                                        48   3e-06
Glyma03g02090.1                                                        47   4e-06
Glyma13g20710.1                                                        47   5e-06
Glyma18g20670.1                                                        47   6e-06

>Glyma17g10760.1 
          Length = 372

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  SENAQSDAKRGK--PTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDI 64
           +E+A ++A   K  P +R  T D H  ++   +R+R+PA+C   +F L +E G +SDG+ 
Sbjct: 35  TEHASAEAANSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGET 94

Query: 65  IHWLIHELRPELLPA 79
           I WL+ +  P ++ A
Sbjct: 95  IEWLLQQAEPAVIAA 109


>Glyma17g14160.1 
          Length = 340

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 21  KPTRRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELL 77
           KP +R  T D H  +    +R+R+PA C   IF L +E G +SDG+ + WL+    P ++
Sbjct: 76  KPAKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEPAII 135

Query: 78  PA 79
            A
Sbjct: 136 EA 137


>Glyma05g01130.1 
          Length = 341

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 22  PTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLP 78
           P +R  T D H  ++   +R+R+PA+C   +F L +E G +SDG+ I WL+ +  P ++ 
Sbjct: 44  PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 103

Query: 79  A 79
           A
Sbjct: 104 A 104


>Glyma02g11780.1 
          Length = 362

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 22  PTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLP 78
           P +R  T D H  ++   +R+R+PA C   +F L +E G +SDG+ I WL+ +  P ++ 
Sbjct: 55  PPKRSSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 114

Query: 79  A 79
           A
Sbjct: 115 A 115


>Glyma16g05840.1 
          Length = 345

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 24  RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R    D H  +    +R+R+PA+C   IF L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 68  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 126


>Glyma19g26560.1 
          Length = 330

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 24  RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R    D H  +    +R+R+PA+C   IF L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 68  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 126


>Glyma12g28970.1 
          Length = 380

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 25 RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
          +R T D H  ++   +R+R+PA C   +F L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 39 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAA 96


>Glyma16g00580.1 
          Length = 361

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 25 RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
          +R T D H  ++   +R+R+PA C   +F L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 25 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAA 82


>Glyma05g03610.1 
          Length = 346

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 24  RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R  T D H  +    +R+R+PA C   IF L +E G +SDG+ + WL+    P ++ A
Sbjct: 71  KRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEPAIIEA 129


>Glyma20g12090.1 
          Length = 77

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 18 KRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRP 74
          K  KP  +    D H+ +N   +RVRV  IC   IF L  E G +++G+ I WL+ +  P
Sbjct: 2  KTKKPCSKGNKKDCHIKVNGRDRRVRVSTICAARIFQLTCELGNKTNGETIEWLLRQAEP 61

Query: 75 ELLPA 79
           ++ A
Sbjct: 62 SIIAA 66


>Glyma08g41070.1 
          Length = 286

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 28  TGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           T D H  +    +R+R+PA C   +F L +E G +SDG+ I WL+ E  P ++ A
Sbjct: 46  TKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLREAEPAVIAA 100


>Glyma07g08710.1 
          Length = 284

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 24 RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
          +R  T D H  +    +R+R+PA C   IF L +E G +SDG+ I WL+    P ++ A
Sbjct: 20 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAA 78


>Glyma18g15410.1 
          Length = 204

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 28 TGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
          T D H  +    +R+R+PA C   +F L +E G +SDG+ I WL+ E  P ++ A
Sbjct: 7  TKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLREAEPAVISA 61


>Glyma06g20660.1 
          Length = 408

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 25  RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           R  T D H  ++   +R+R+PA+C   +F L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 82  RTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAA 139


>Glyma20g29330.1 
          Length = 318

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 21  KPTRRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELL 77
           K   +R + D H  +    +R+R+PA C   IF L +E G +SDG+ I WL+    P ++
Sbjct: 59  KAAAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAII 118

Query: 78  PA 79
            A
Sbjct: 119 EA 120


>Glyma10g38510.1 
          Length = 291

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 25  RRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R + D H  +    +R+R+PA C   IF L +E G +SDG+ I WL+    P ++ A
Sbjct: 45  KRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEA 102


>Glyma03g02090.1 
          Length = 336

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 36  NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
            +R+R+PA C   IF L +E G +SDG+ I WL+    P ++ A
Sbjct: 78  GRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAA 121


>Glyma13g20710.1 
          Length = 148

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 25 RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
          R  T D H  +N   +RVR+P +C   IF L +E G RSDG+ I WL+      ++ A
Sbjct: 1  RPSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAETSIIAA 58


>Glyma18g20670.1 
          Length = 107

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 22 PTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELL 77
          P +R  T D H  ++   +R+R+P +C   +F L +E G +SD   I WL+ ++ P ++
Sbjct: 5  PPKRTSTKDQHTKVDGRGRRIRMPTLCATRVFQLNRELGHKSDDKTIEWLLQQVEPAMI 63