Jatropha Genome Database

JcCB0572431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0572431.10 + phase: 0 /partial
         (325 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17860.1                                                        65   9e-11
Glyma17g04650.1                                                        64   2e-10

>Glyma13g17860.1 
          Length = 294

 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 1/62 (1%)

Query: 265 ESENTGMAVAGGKKIEICMGGKCKKMGAIALLEEFEK-KVGKEGAVVGCKCMGKCKNAPN 323
           +SE+  +  A  K+IE+CMG KCK+ GA AL++EFE+    + GAVV CKCMGKCK APN
Sbjct: 176 KSESAVVTAAPQKRIEVCMGTKCKRSGAAALMQEFERVVGVEGGAVVSCKCMGKCKTAPN 235

Query: 324 VK 325
           VK
Sbjct: 236 VK 237


>Glyma17g04650.1 
          Length = 338

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 265 ESENTGMAVAGGKKIEICMGGKCKKMGAIALLEEFEK-KVGKEGAVVGCKCMGKCKNAPN 323
           ++E+  +  A  K+IE+CMG KCK+ GA AL++EFEK    +  AVV CKCMGKCK APN
Sbjct: 217 KNESAVVTSAPQKRIEVCMGNKCKRSGAAALMQEFEKVVGVEGVAVVACKCMGKCKTAPN 276

Query: 324 VK 325
           VK
Sbjct: 277 VK 278