Jatropha Genome Database

JcCB0569231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0569231.10 - phase: 0 /partial/short
         (42 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g32870.2                                                        59   9e-10
Glyma09g32870.1                                                        59   9e-10
Glyma16g21590.2                                                        55   1e-08
Glyma16g21590.1                                                        55   1e-08

>Glyma09g32870.2 
          Length = 634

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 1   FVLFYACSLDPENCGLKFARTLADRFVYGDNPLTSRMSSVAY 42
           FV+FYAC+LDPE CG+KFA  LAD F    NP  +RMS+VAY
Sbjct: 339 FVMFYACALDPEGCGVKFAMVLADMFGGDANPPITRMSAVAY 380


>Glyma09g32870.1 
          Length = 634

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 1   FVLFYACSLDPENCGLKFARTLADRFVYGDNPLTSRMSSVAY 42
           FV+FYAC+LDPE CG+KFA  LAD F    NP  +RMS+VAY
Sbjct: 339 FVMFYACALDPEGCGVKFAMVLADMFGGDANPPITRMSAVAY 380


>Glyma16g21590.2 
          Length = 627

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 31/42 (73%)

Query: 1   FVLFYACSLDPENCGLKFARTLADRFVYGDNPLTSRMSSVAY 42
           +V+FYAC+LDPE CG+KFA  LAD F    NP  +RMS+ AY
Sbjct: 333 YVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAY 374


>Glyma16g21590.1 
          Length = 627

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 31/42 (73%)

Query: 1   FVLFYACSLDPENCGLKFARTLADRFVYGDNPLTSRMSSVAY 42
           +V+FYAC+LDPE CG+KFA  LAD F    NP  +RMS+ AY
Sbjct: 333 YVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAY 374