Jatropha Genome Database

JcCB0555631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0555631.10 - phase: 1 /pseudo/partial
         (290 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g42830.1                                                       141   7e-34
Glyma20g24170.1                                                       134   1e-31
Glyma08g39470.1                                                        62   6e-10
Glyma11g16730.1                                                        53   3e-07
Glyma15g06950.1                                                        53   4e-07
Glyma15g06960.1                                                        52   5e-07
Glyma07g30730.1                                                        52   9e-07
Glyma13g32360.1                                                        52   1e-06

>Glyma10g42830.1 
          Length = 571

 Score =  141 bits (356), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 33/214 (15%)

Query: 71  NLKLKIFMLKEREGKGLMGDSMIYVPWFPKFLI-LQDELKEHSDDED-----------GK 118
           NL+  +  + + +   ++GD++ YV    K +  LQDEL+E++D E            G 
Sbjct: 352 NLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQDELEENADTESNCMNIGVGAELGP 411

Query: 119 NGNQSNIPSETLSQNGGLGNGFQAGASEVSCPKLNQQKSENFHDKGQ---QMEVQVEVAQ 175
           N       ++T    G  GNG+           +++QK E+ H+      +M+ QVEVA 
Sbjct: 412 NAEHDK--AQTGLHVGTSGNGY-----------VSKQKQEDMHECANLLIEMQPQVEVAL 458

Query: 176 IDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSCRGLVSNVFKVEKKDSEMVQ 235
           ID NE+FVKVFCEH+ GGFV+LMEAL+++G++V +  VTS  GLVSNVFKVEKKD+E V+
Sbjct: 459 IDENEYFVKVFCEHRPGGFVKLMEALNTIGMDVVHATVTSHTGLVSNVFKVEKKDNETVE 518

Query: 236 ADYVRNSLLELTRDHPRGW-----PASDNGNGMD 264
           A+ VR+SLLELTR+  RGW        +NG G D
Sbjct: 519 AEDVRDSLLELTRNRYRGWTHEMTATPENGVGRD 552


>Glyma20g24170.1 
          Length = 538

 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 121/197 (61%), Gaps = 15/197 (7%)

Query: 71  NLKLKIFMLKEREGKGLMGDSMIYVPWFPKFLI-LQDELKEHSDDED---------GKNG 120
           NL+  +  + + +   ++GD++ YV    K +  LQDEL+E++D E          G N 
Sbjct: 310 NLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQDELEENADTESNCMNCVSELGPNA 369

Query: 121 NQSNIPSETLSQNGGLGNGFQAGA-SEVSCPKLNQQ--KSENFHDKGQQMEVQVEVAQID 177
                 ++T    G  GNG+ +    E    KL ++  K     +   +M+ QVEVA ID
Sbjct: 370 EHDK--AQTGLHVGTSGNGYVSKQKQEAKFIKLRERINKIRYIANLLNEMQPQVEVALID 427

Query: 178 GNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSCRGLVSNVFKVEKKDSEMVQAD 237
           GNE+FVKVFCEH+  GFV+LMEAL+++G++V +  VTS  GLVSNVFKVEKKDSE V+A+
Sbjct: 428 GNEYFVKVFCEHRPDGFVKLMEALNTIGMDVVHATVTSHTGLVSNVFKVEKKDSETVEAE 487

Query: 238 YVRNSLLELTRDHPRGW 254
            VR+SLLEL R+  RGW
Sbjct: 488 DVRDSLLELMRNRYRGW 504


>Glyma08g39470.1 
          Length = 451

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 150 PKLNQQKSENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVT 209
           P LNQ  S     K  QMEVQVEV  I   +F +K+  E   GGF +LMEA+ S+GL+V 
Sbjct: 315 PPLNQSSSGC--TKKMQMEVQVEVHHISKTDFLIKLCSEQTQGGFSKLMEAIHSIGLKVD 372

Query: 210 NVNVTSCRGLVSNVF 224
           + N+T+  G V N+ 
Sbjct: 373 SANMTTLDGKVLNIL 387


>Glyma11g16730.1 
          Length = 188

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 42/61 (68%)

Query: 157 SENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSC 216
           SE    K ++++ +V+  +IDGN+ +VK+  E K G F +LMEA+ ++G+E+ + NVT+ 
Sbjct: 96  SEEIKPKKEEIDEEVQATKIDGNKLWVKMIIEKKRGRFKKLMEAMHNIGIELIDTNVTTL 155

Query: 217 R 217
           +
Sbjct: 156 K 156


>Glyma15g06950.1 
          Length = 191

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 2/81 (2%)

Query: 170 QVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSCRG--LVSNVFKVE 227
           +V VAQI+ N+ +VK+  E K G F RLM+AL++ G+E+ + N+T+ +G  L+++  K  
Sbjct: 103 EVRVAQINENKLWVKIIIEKKRGRFNRLMQALNNFGIELIDTNLTTTKGSFLITSCIKHY 162

Query: 228 KKDSEMVQADYVRNSLLELTR 248
               + ++ D   N+L++L +
Sbjct: 163 LCGIKSIRIDLKMNTLIQLCK 183


>Glyma15g06960.1 
          Length = 159

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 36/51 (70%)

Query: 167 MEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSCR 217
           ++ +V VAQID N+ +VK+  E K G F +LMEAL++ G+E+ + N T+ +
Sbjct: 108 IQAEVRVAQIDENKLWVKIIIEKKRGRFSKLMEALNNFGIELIDTNFTTTK 158


>Glyma07g30730.1 
          Length = 134

 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 35/47 (74%)

Query: 171 VEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSCR 217
           V+  +IDGN+ +VK+  E K G F +LMEA+D++G+E+ + NVT+ +
Sbjct: 84  VQATKIDGNKLWVKMIIEKKRGRFKKLMEAMDNIGIELIDTNVTTLK 130


>Glyma13g32360.1 
          Length = 136

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 158 ENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVNVTSCR 217
           E+  + G Q EV+V  A+ID N+ +VK+  E K G F +LMEAL++ G+E+ + N+ + +
Sbjct: 66  EDMKNWGIQAEVRV--AKIDENKLWVKIIIEKKRGRFSKLMEALNNFGIELIDTNLATTK 123

Query: 218 G 218
           G
Sbjct: 124 G 124