Jatropha Genome Database

JcCB0551471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551471.10 - phase: 0 /partial
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g03810.1                                                       119   2e-27
Glyma20g10310.1                                                       118   2e-27
Glyma11g01010.1                                                        66   2e-11
Glyma10g03360.1                                                        65   2e-11
Glyma20g28490.1                                                        65   2e-11
Glyma08g07890.1                                                        64   5e-11
Glyma03g31240.1                                                        64   5e-11
Glyma05g24730.1                                                        64   7e-11
Glyma19g34090.1                                                        63   1e-10
Glyma15g05770.1                                                        60   1e-09
Glyma01g44530.1                                                        55   3e-08
Glyma08g11840.1                                                        54   7e-08
Glyma05g28720.1                                                        49   3e-06
Glyma05g28720.2                                                        49   3e-06
Glyma11g36460.1                                                        47   6e-06

>Glyma13g03810.1 
          Length = 216

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 68/85 (80%), Gaps = 3/85 (3%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           N C+  L NMSDCL+YV++ S    PDK CCPELAGL+DSNPICLC+LLG     +S GI
Sbjct: 51  NGCLMALTNMSDCLTYVEDGSKLAKPDKGCCPELAGLIDSNPICLCELLGKP---DSIGI 107

Query: 118 KININRALKLPSVCGVETPPVSTCA 142
           KI++N+ALKLPSVCGV TPPVSTC+
Sbjct: 108 KIDLNKALKLPSVCGVTTPPVSTCS 132


>Glyma20g10310.1 
          Length = 248

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 68/85 (80%), Gaps = 3/85 (3%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           N C+  L NMSDCL+YV++ S    PDK CCPELAGLVDSNPICLC++LG     +S GI
Sbjct: 78  NGCLMALANMSDCLTYVEDGSKLSKPDKGCCPELAGLVDSNPICLCEMLGKP---DSIGI 134

Query: 118 KININRALKLPSVCGVETPPVSTCA 142
           KI++N+ALKLPSVCGV TPPVSTC+
Sbjct: 135 KIDLNKALKLPSVCGVTTPPVSTCS 159


>Glyma11g01010.1 
          Length = 170

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           + C   L+++S CL+Y+   S+   P   CC +LA +V S P CLCQ+L  S    S GI
Sbjct: 28  SSCTNVLVSLSPCLNYITGNSS--TPSSGCCSQLASVVRSQPQCLCQVL--SGGGSSLGI 83

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            IN  +AL LP  C V+TPP S C
Sbjct: 84  NINQTQALALPVACKVQTPPTSQC 107


>Glyma10g03360.1 
          Length = 186

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           + C   L ++S CL+Y+   S+   P  +CC +L+ +V S+P CLC +L     T  FGI
Sbjct: 26  SGCTNTLTSLSPCLNYIMGSSS--TPSASCCSQLSSIVQSSPQCLCSVLNGGGST--FGI 81

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            IN   AL LP  C V+TPPVS C
Sbjct: 82  TINQTLALSLPGACEVQTPPVSQC 105


>Glyma20g28490.1 
          Length = 163

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           + C + L+N+S CL+++   S+   P   CC +L+ +V S P CLCQ+L       S G+
Sbjct: 24  SSCTSALVNLSPCLNFITGNSS--TPSSGCCTQLSSVVRSQPQCLCQVLNGGG--SSLGV 79

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            IN  +AL LP  C V TPP++ C
Sbjct: 80  TINQTQALALPGACNVRTPPITQC 103


>Glyma08g07890.1 
          Length = 207

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           DC   +L M+DCLS+V   ST   P+  CC  L  ++ + P CLC+   +S+    FG+ 
Sbjct: 57  DCTNLVLTMADCLSFVTNGSTVTKPEGTCCSGLKSVLKTAPACLCEAFKSSA---QFGVV 113

Query: 119 ININRALKLPSVCGVETPPVSTC 141
           +N+ +A  LP+ C V  P  + C
Sbjct: 114 LNVTKATSLPAACKVSAPSATNC 136


>Glyma03g31240.1 
          Length = 184

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 6/84 (7%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLL--GNSSLTESF 115
           + C    ++++ CL YV     A +P  +CC +LA +V S P+CLC+++  G SS+  SF
Sbjct: 30  SSCTNVFISLAPCLDYVT--GNASIPSSSCCSQLAFVVRSQPLCLCEVVNGGASSIAASF 87

Query: 116 GIKININRALKLPSVCGVETPPVS 139
              IN  RAL LP+ C V+TPP++
Sbjct: 88  --NINQTRALALPTACNVQTPPIT 109


>Glyma05g24730.1 
          Length = 192

 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           DC   +L M+DCLS+V   ST   P+  CC  L  ++ + P CLC+   +S+    FG+ 
Sbjct: 39  DCSNLVLTMADCLSFVTNGSTVTKPEGTCCSGLKSVLKTAPACLCEAFKSSA---QFGVV 95

Query: 119 ININRALKLPSVCGVETPPVSTC 141
           +N+ +A  LP+ C V  P  + C
Sbjct: 96  LNVTKATTLPAACKVSAPSATNC 118


>Glyma19g34090.1 
          Length = 182

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 6/81 (7%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLL--GNSSLTESF 115
           + C    +++S CL YV E   A +P  +CC +LA +V S P+CLC+++  G SS+  SF
Sbjct: 29  SSCTNVFISLSPCLDYVTE--NASIPSSSCCSQLAFVVRSQPLCLCEVVNGGASSIAASF 86

Query: 116 GIKININRALKLPSVCGVETP 136
              IN  RAL LP+ C V+TP
Sbjct: 87  --NINQTRALALPTSCNVQTP 105


>Glyma15g05770.1 
          Length = 177

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 23/113 (20%)

Query: 29  AQAPSPAPFLSPEXXXXXXXXXXXXXXXXNDCITPLLNMSDCLSYVQEPSTAKVPDKNCC 88
           A+AP+PAP +                    +C   +L +SDCL++V   ST   P   CC
Sbjct: 26  ARAPAPAPSV--------------------ECSNLVLTLSDCLTFVSNGSTVTKPQGTCC 65

Query: 89  PELAGLVDSNPICLCQLLGNSSLTESFGIKININRALKLPSVCGVETPPVSTC 141
             L  ++++ P CLC+   +S+     G+ IN+ +A+ LP+ C + TP  + C
Sbjct: 66  SSLKTVLNTAPKCLCEAFNSSA---QLGLAINVTKAVTLPAACKLSTPSAANC 115


>Glyma01g44530.1 
          Length = 168

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
            C   L+++S CL+Y+   S+   P   CC +LA +V S P CLCQ+L  S    S G+ 
Sbjct: 27  SCTNVLVSLSPCLNYITGNSS--TPSSGCCSQLASVVRSQPQCLCQVL--SGGGSSLGLN 82

Query: 119 ININRALKLPSVCGVETPPVSTC 141
           IN  +AL LP  C V+TPP S C
Sbjct: 83  INQTQALALPGACEVQTPPTSQC 105


>Glyma08g11840.1 
          Length = 193

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           +C   LL ++ CLSYV     AKVP  +CC  +  +++ +  CLC L+ +     S G+K
Sbjct: 33  ECTDKLLGLAGCLSYV--GGEAKVPTMDCCSGIKEVINKSKRCLCILIKDRD-DPSLGLK 89

Query: 119 ININRALKLPSVCGVETP 136
           IN+  AL LP VC  ETP
Sbjct: 90  INVTLALNLPDVC--ETP 105


>Glyma05g28720.1 
          Length = 193

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           +C   LL ++ CL YV     AKVP  +CC  +  ++D +  CLC L+ +     + G+K
Sbjct: 33  ECTDKLLGLAGCLPYVG--GEAKVPAMDCCSGIREVIDKSKRCLCILIKDRD-DPNLGLK 89

Query: 119 ININRALKLPSVCGVETP 136
           IN+  AL LP  C  +TP
Sbjct: 90  INVTLALSLPDAC--QTP 105


>Glyma05g28720.2 
          Length = 192

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           +C   LL ++ CL YV     AKVP  +CC  +  ++D +  CLC L+ +     + G+K
Sbjct: 33  ECTDKLLGLAGCLPYVG--GEAKVPAMDCCSGIREVIDKSKRCLCILIKDRD-DPNLGLK 89

Query: 119 ININRALKLPSVCGVETP 136
           IN+  AL LP  C  +TP
Sbjct: 90  INVTLALSLPDAC--QTP 105


>Glyma11g36460.1 
          Length = 182

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           +C   L++++ C+ YV     AK P  +CC  L  ++D +  CLC L+ +     + GIK
Sbjct: 30  ECADKLIDLASCVPYVG--GEAKTPTIDCCTGLKAVLDRSKKCLCILIKDRD-DPNLGIK 86

Query: 119 ININRALKLPSVC 131
           IN   A++LPS C
Sbjct: 87  INATLAIQLPSAC 99