Jatropha Genome Database

JcCB0551271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551271.10 - phase: 0 /partial
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g07740.1                                                       182   2e-46
Glyma15g41540.1                                                       109   3e-24
Glyma08g17610.1                                                       108   6e-24
Glyma08g17600.1                                                       105   2e-23
Glyma15g41550.1                                                       105   3e-23

>Glyma13g07740.1 
          Length = 151

 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/145 (60%), Positives = 108/145 (74%)

Query: 4   LKKADIXXXXXXXXXXXXVANCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSA 63
           L+K +I            VAN  +FA +LSSGVDIFVNDSFS SHK+LASTV +TRFC  
Sbjct: 7   LEKENILLLENLSNIKEEVANSLEFARVLSSGVDIFVNDSFSNSHKVLASTVGVTRFCYV 66

Query: 64  CVAGFHFEESLYQMKNAVKMNKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQ 123
           C+AGFHFEE L  +KN  + +++PY+AI+GGGNLYDKAAS   LAS+C G VFVG+MSFQ
Sbjct: 67  CIAGFHFEERLCLLKNLAEESRKPYVAILGGGNLYDKAASFQFLASRCQGFVFVGMMSFQ 126

Query: 124 IMHALGYSVPSSLIEPQAHKAALDI 148
           +MHALG SVP +L++ +A   ALDI
Sbjct: 127 VMHALGVSVPRNLVDHKAFNEALDI 151


>Glyma15g41540.1 
          Length = 483

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  + A+ L+S  D+FVND+F  +H+  AST  +T++    VAGF  ++ L  +  AV  
Sbjct: 207 NDPEHAKKLASLADLFVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSS 266

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  K D L+  G M F    A G SV SSL+E     
Sbjct: 267 PKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLD 326

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+++ + +L P D      FAP    +V PA  I  GW  +D+GP S+
Sbjct: 327 LATSLLAKAKEKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSV 382


>Glyma08g17610.1 
          Length = 485

 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  + A+ L+S  D++VND+F  +H+  AST  +T++    VAGF  ++ L  +  AV  
Sbjct: 209 NDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSN 268

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  K D L+  G M F    A G SV SSL+E     
Sbjct: 269 PKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLD 328

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+++ + +L P D      FAP    +V PA  I  GW  +D+GP S+
Sbjct: 329 LATSLLAKAKEKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSV 384


>Glyma08g17600.1 
          Length = 401

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 1/187 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  + ++    VAGF  ++ L  +  AV  
Sbjct: 130 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  K + L+  G M F    A GYSV SSL+E     
Sbjct: 190 PKRPFAAIVGGSKVSSKIGVIESLLEKVNVLLLGGGMIFTFYKAQGYSVGSSLVEEDKLS 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSLDEIY 202
            A  ++  A+ + + +L P D      FA     +  PA  I  GW  +D+GP S+    
Sbjct: 250 LATTLLEKAKAKGVSLLLPTDVVIADKFAADANSKTVPASSIPDGWMGLDIGPDSIKTFG 309

Query: 203 SLLLKCK 209
             L K +
Sbjct: 310 EALDKTQ 316


>Glyma15g41550.1 
          Length = 401

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  + ++    VAGF  ++ L  +  AV  
Sbjct: 130 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  K + L+  G M F    A GYSV SSL+E     
Sbjct: 190 PKRPFAAIVGGSKVSSKIGVIESLLEKVNVLLLGGGMIFTFYKAQGYSVGSSLVEEDKLS 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+ + + +L P D      FA     +  PA  I  GW  +D+GP S+
Sbjct: 250 LATTLLEKAKAKGVSLLLPTDVVIADKFAADANSKTVPASSIPDGWMGLDIGPDSI 305