Jatropha Genome Database

JcCB0550571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0550571.10 + phase: 1 /pseudo/partial
         (280 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52600.1                                                       345   4e-95
Glyma15g04510.1                                                       342   3e-94
Glyma13g40950.1                                                       333   1e-91
Glyma19g36910.1                                                       268   7e-72
Glyma13g20840.1                                                       255   5e-68
Glyma10g06630.1                                                       250   1e-66
Glyma19g36910.2                                                       224   1e-58
Glyma03g34210.1                                                       200   2e-51
Glyma01g06930.1                                                        64   2e-10

>Glyma18g52600.1 
          Length = 442

 Score =  345 bits (884), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 170/259 (65%), Positives = 202/259 (77%), Gaps = 6/259 (2%)

Query: 28  ELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSSLPLTIAEELFSS---- 83
           ELL T+KR+   C +L     E CIS ELQLAGPEY  LQ FSSLP   AEELFSS    
Sbjct: 184 ELLHTKKRQDYVCEYLMDALGERCISSELQLAGPEYGHLQGFSSLPPAFAEELFSSELLD 243

Query: 84  --CTQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYG 141
                 +  D ++ K  +VTVDN LSP HTLLQIQC+DQKGL YDI+R SKD DI++A+G
Sbjct: 244 KLSLHPLSQDMTTLKTPTVTVDNSLSPVHTLLQIQCVDQKGLCYDIMRISKDSDIKVAFG 303

Query: 142 RFSSSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLV 201
           RFSSSVKG RN+DLF+Q +DGKKIIDP+ Q TLCS LK EMLHP RV +VN+GPDTELLV
Sbjct: 304 RFSSSVKGFRNIDLFVQHNDGKKIIDPESQKTLCSCLKEEMLHPLRVTIVNRGPDTELLV 363

Query: 202 ANPVELCGKGRPRVFYDVTLALKTLGICIFSAKIGRHSTEDRQWEVYRFLLDENCEVPIA 261
           ANPVEL GKGRPRVFYDVTL LK LG+ IFSA++ RHST++RQWEVYRFLL+E+ + P+ 
Sbjct: 364 ANPVELSGKGRPRVFYDVTLTLKALGVGIFSAEVVRHSTQERQWEVYRFLLEESRDFPLT 423

Query: 262 SAKSRKQIVDRVRKTLMGW 280
            +++R QIVD+VR+TLMGW
Sbjct: 424 RSQARTQIVDKVRRTLMGW 442


>Glyma15g04510.1 
          Length = 424

 Score =  342 bits (877), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 165/262 (62%), Positives = 202/262 (77%), Gaps = 9/262 (3%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSSLPLTIAEELFSSC-- 84
           +ELL T  R+ +TC  L AV ++ CISCELQLAGPEYE  Q  SSL   +AEELF  C  
Sbjct: 164 KELLHTRNRQDETCERLNAVLRDSCISCELQLAGPEYEYNQGISSLSPALAEELFR-CEL 222

Query: 85  ------TQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQI 138
                  QA+  D +  KK +VT+DN LSPAHTL+QI+C D KGL YDI+RT KD +++I
Sbjct: 223 SDNEVRAQALSPDMTKLKKTNVTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKI 282

Query: 139 AYGRFSSSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTE 198
           +YGRFS +  G+R++D+FIQQ DGKKI+DP+ Q  LCSRLK EMLHP RVI+ N+GPDTE
Sbjct: 283 SYGRFSPNSMGYRDLDIFIQQKDGKKILDPEKQSALCSRLKQEMLHPLRVIIANRGPDTE 342

Query: 199 LLVANPVELCGKGRPRVFYDVTLALKTLGICIFSAKIGRHSTEDRQWEVYRFLLDENCEV 258
           LLVANPVEL G GRPRVFYDVT ALKT+GIC+FSA++GRHST +R+WEVYRFLLDENCE 
Sbjct: 343 LLVANPVELSGMGRPRVFYDVTFALKTVGICVFSAEVGRHSTSEREWEVYRFLLDENCEF 402

Query: 259 PIASAKSRKQIVDRVRKTLMGW 280
            +    +R +IV+RVR+TLMGW
Sbjct: 403 QLTGVAARNKIVNRVRRTLMGW 424


>Glyma13g40950.1 
          Length = 396

 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 162/258 (62%), Positives = 200/258 (77%), Gaps = 4/258 (1%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSSLPLTIAEELFSSC-- 84
           RELL T  R+ +TC  L AV ++ C SCELQLAGPEYE  Q  SSL   +AEEL  S   
Sbjct: 139 RELLHTRNRQDETCERLNAVLRDSCTSCELQLAGPEYEYNQGISSLSPALAEELELSDNQ 198

Query: 85  --TQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYGR 142
             +QA+  D +  KKA+V +DN+LSPAHTL+QI+C D KG  YDI+RT KD +++I+YGR
Sbjct: 199 VRSQALTPDMTKLKKANVAIDNYLSPAHTLVQIRCADHKGRLYDIMRTLKDMNMKISYGR 258

Query: 143 FSSSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLVA 202
           FS +  G+R++D+FIQQ+DGKKI+D + Q  LCS LK EMLHP RVI+ N+GPDTELLVA
Sbjct: 259 FSPNSMGYRDLDIFIQQNDGKKILDREKQSALCSHLKQEMLHPLRVIIANRGPDTELLVA 318

Query: 203 NPVELCGKGRPRVFYDVTLALKTLGICIFSAKIGRHSTEDRQWEVYRFLLDENCEVPIAS 262
           NPVEL G GRPRVFYDVT ALKTLGIC+FSA++GRHST +R+WEVYRFLLDENCE  +  
Sbjct: 319 NPVELSGIGRPRVFYDVTFALKTLGICVFSAEVGRHSTSEREWEVYRFLLDENCEFQLTG 378

Query: 263 AKSRKQIVDRVRKTLMGW 280
             +R +IV+RVR+TLMGW
Sbjct: 379 VAARNKIVNRVRRTLMGW 396


>Glyma19g36910.1 
          Length = 412

 Score =  268 bits (684), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 177/256 (69%), Gaps = 6/256 (2%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSS-LPLTIAEELFS-SC 84
           RELL T+KRR DT   L A+  +  I+ +++L GPE  +    SS LP  + E++F    
Sbjct: 160 RELLHTKKRRDDTIEQLSAILGDPLITIDIELVGPEIAACSQASSFLPSAMTEDMFDLEL 219

Query: 85  TQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYGRFS 144
             +I   TS+S   S+T+DN LSPAHTL+QI C D KGL YDI+RT KD +IQI+YGRFS
Sbjct: 220 PGSIQSGTSTSDSVSITMDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFS 279

Query: 145 SSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLVANP 204
           +  +G   +DLFI Q+DGKKI++P  Q +L SRL+ E+L P RV VV++GPDTELLVANP
Sbjct: 280 TKPRGKCELDLFIMQADGKKIVNPSKQKSLSSRLRMELLRPLRVTVVSRGPDTELLVANP 339

Query: 205 VELCGKGRPRVFYDVTLALKTLGICIFSAKIGRHSTEDRQWEVYRFLLDENCEVPIASAK 264
           VEL GKGRP VFYD+T ALK LG CIFSA++GRH   DR+WEVYR LLDE   + +    
Sbjct: 340 VELSGKGRPLVFYDITHALKMLGPCIFSAEVGRHVVGDREWEVYRILLDEGDGLSVP--- 396

Query: 265 SRKQIVDRVRKTLMGW 280
            R +I   V K LMGW
Sbjct: 397 -RNKIEKGVWKMLMGW 411


>Glyma13g20840.1 
          Length = 412

 Score =  255 bits (651), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 134/256 (52%), Positives = 172/256 (67%), Gaps = 6/256 (2%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESL-QNFSSLPLTIAEELFS-SC 84
           RELL T+KR+ +T  +L  +  +  IS +++L GPE  +  Q    LP  I E++F    
Sbjct: 160 RELLHTKKRKDETIEYLTEIMGDAIISIDIELVGPEITACSQAPPFLPTAITEDVFDLEL 219

Query: 85  TQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYGRFS 144
                  T  S   S+T+DN LSPAHTL+QI C D KGL YDI+RT KD +IQI+YGRF+
Sbjct: 220 PDLARGGTLRSDYVSITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFT 279

Query: 145 SSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLVANP 204
           +  +G   +DLFI Q+DGKKI+DP  Q +L SRL+ E+L P RV +V++GPDTELLV+NP
Sbjct: 280 AKPRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELLRPLRVAIVSRGPDTELLVSNP 339

Query: 205 VELCGKGRPRVFYDVTLALKTLGICIFSAKIGRHSTEDRQWEVYRFLLDENCEVPIASAK 264
           VEL GKGRP VFYD+TLALK L  CIF AKIGRH   DR+WEVYR LLDE   + +    
Sbjct: 340 VELSGKGRPLVFYDITLALKMLDTCIFLAKIGRHLIGDREWEVYRILLDEGEGLSVP--- 396

Query: 265 SRKQIVDRVRKTLMGW 280
            R ++ + V K LMGW
Sbjct: 397 -RNKVEEGVWKMLMGW 411


>Glyma10g06630.1 
          Length = 387

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 131/254 (51%), Positives = 167/254 (65%), Gaps = 28/254 (11%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSSLPLTIAEELFSSCTQ 86
           RELL T+KR+ +T  HL  +  +  IS +++L GPE                   ++C  
Sbjct: 161 RELLHTKKRKDETIEHLTEIMGDAIISIDIELVGPE------------------ITACG- 201

Query: 87  AILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYGRFSSS 146
                T  S   S+T+DN LSPAHTL+QI C D KGL YDI+RT KD +IQI+YGRF++ 
Sbjct: 202 -----TLRSDYVSITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTK 256

Query: 147 VKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLVANPVE 206
            +G   +DLFI Q+DGKKI+DP  Q +L SRL+ E+L P RV +V++GPDTELLV+NPVE
Sbjct: 257 PRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELLRPLRVAIVSRGPDTELLVSNPVE 316

Query: 207 LCGKGRPRVFYDVTLALKTLGICIFSAKIGRHSTEDRQWEVYRFLLDENCEVPIASAKSR 266
           L GKGRP VFYD+TLALK L  CIFSAKIGRH   DR+WEVYR LLDE   + +     R
Sbjct: 317 LSGKGRPLVFYDITLALKMLDTCIFSAKIGRHLIGDREWEVYRILLDEGEGLSVP----R 372

Query: 267 KQIVDRVRKTLMGW 280
            ++ + V K LMGW
Sbjct: 373 NKVEEGVWKMLMGW 386


>Glyma19g36910.2 
          Length = 384

 Score =  224 bits (570), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/209 (55%), Positives = 148/209 (70%), Gaps = 2/209 (0%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSS-LPLTIAEELFS-SC 84
           RELL T+KRR DT   L A+  +  I+ +++L GPE  +    SS LP  + E++F    
Sbjct: 160 RELLHTKKRRDDTIEQLSAILGDPLITIDIELVGPEIAACSQASSFLPSAMTEDMFDLEL 219

Query: 85  TQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYGRFS 144
             +I   TS+S   S+T+DN LSPAHTL+QI C D KGL YDI+RT KD +IQI+YGRFS
Sbjct: 220 PGSIQSGTSTSDSVSITMDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFS 279

Query: 145 SSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLVANP 204
           +  +G   +DLFI Q+DGKKI++P  Q +L SRL+ E+L P RV VV++GPDTELLVANP
Sbjct: 280 TKPRGKCELDLFIMQADGKKIVNPSKQKSLSSRLRMELLRPLRVTVVSRGPDTELLVANP 339

Query: 205 VELCGKGRPRVFYDVTLALKTLGICIFSA 233
           VEL GKGRP VFYD+T ALK LG CIFS 
Sbjct: 340 VELSGKGRPLVFYDITHALKMLGPCIFSV 368


>Glyma03g34210.1 
          Length = 407

 Score =  200 bits (508), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 105/192 (54%), Positives = 134/192 (69%), Gaps = 2/192 (1%)

Query: 27  RELLLTEKRRVDTCRHLFAVFKEYCISCELQLAGPEYESLQNFSS-LPLTIAEELFS-SC 84
           RELL T+KRR DT   L A+  +  I+ +++L GPE  +    SS LP  I+E++F    
Sbjct: 160 RELLHTKKRRDDTIEQLAAILGDPLIAIDIELVGPETAACSQASSFLPSAISEDMFDLEL 219

Query: 85  TQAILMDTSSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQIAYGRFS 144
             +I   TS+S   S+T+DN LSPAHTL+QI C D KGL YDI+RT KD +IQI+YGRFS
Sbjct: 220 PDSIRSGTSTSDSVSITMDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFS 279

Query: 145 SSVKGHRNVDLFIQQSDGKKIIDPKLQLTLCSRLKAEMLHPFRVIVVNQGPDTELLVANP 204
              +G   +DLFI Q+DGKKI+DP  Q +L SRL+ E+L P R+ VV++GPDTELLVANP
Sbjct: 280 PKPRGKCELDLFIVQADGKKIVDPSKQKSLTSRLRMELLRPLRITVVSRGPDTELLVANP 339

Query: 205 VELCGKGRPRVF 216
           VEL GKGRP  F
Sbjct: 340 VELSGKGRPLFF 351


>Glyma01g06930.1 
          Length = 147

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 35  RRVDTCRHLFAVFKEYCISCELQLAGPEYESL-QNFSSLPLTIAEELFS-SCTQAILMDT 92
           ++ +T  HL  +  +  +S +++L  PE  +  Q    LP  I E++F           T
Sbjct: 43  QKDETIEHLAEIMGDAIMSIDIELVCPEITACSQAPPFLPTAITEDVFDLKLPDLARGGT 102

Query: 93  SSSKKASVTVDNHLSPAHTLLQIQCIDQKGLFYDILRTSKDCDIQ 137
             S   S+ +DN LS AHTL+QI C D KGL YDI+RT KD +IQ
Sbjct: 103 LRSNYVSIIMDNLLSLAHTLVQIMCQDHKGLLYDIMRTLKDYNIQ 147