Jatropha Genome Database

JcCB0549541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0549541.10 - phase: 0 /pseudo
         (417 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g02290.1                                                       350   1e-96
Glyma04g02230.1                                                       348   6e-96
Glyma19g36580.1                                                        75   2e-13
Glyma13g20390.1                                                        71   2e-12
Glyma03g33830.1                                                        69   1e-11
Glyma03g33830.2                                                        68   2e-11

>Glyma06g02290.1 
          Length = 434

 Score =  350 bits (899), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 172/326 (52%), Positives = 233/326 (71%), Gaps = 4/326 (1%)

Query: 15  SLKAISEASRLKGQQVVQI--QKAALYSLIKSI-SDNQEEAEPFYLIDLGVVIRLMDKWN 71
           SLK I  AS +KG++V  +  +  AL   I++I +D  +   PF ++DLGVV+ LMDKW 
Sbjct: 18  SLKPIFSASGVKGKRVTALSAEANALTDFIQAIIADKPDIDSPFSVLDLGVVMGLMDKWA 77

Query: 72  QSLPNVKPFYAVKCNTEPALLLSLATLGANFDCASQAEIETILGLGVNPDRIVYANPCKS 131
             LP V+PFYAVKCN   +L+ +LA LG++FDCAS+AEIE++L LGV+PDRI+YANPCKS
Sbjct: 78  CKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRIIYANPCKS 137

Query: 132 ASHIKYAARVGVNLTTFDSKQEIDKIKKWHPKCELLLRLKVPSENSSWRSFGNKYGALTE 191
            SHI+YAA VGVN+TT+DS  E++KI+  HP CELLLR+K P ++ +  S G KYGAL E
Sbjct: 138 ESHIRYAASVGVNVTTYDSLDEVEKIRNCHPTCELLLRIKPPQDSGARTSLGLKYGALPE 197

Query: 192 EVASLLQHANQAGLKVVGVSFHVGSIASDPQVYHSAIATARFAFDTAIKLEMPAMHILNI 251
           EV  LLQ A++AGLKV GVSFH+GS  +D + Y  AI+ A+  F+ A  L +P M +L+I
Sbjct: 198 EVHELLQAAHEAGLKVTGVSFHIGSGGADTRAYDGAISAAKNVFEMASGLGLPRMRVLDI 257

Query: 252 GGGFRANPLFDEIGKTVNDSVQEFFPDELTSLTMIAEPGRYFVETAFILVTNVIGKRVRG 311
           GGGF + P F+     +N ++Q  F +E   L +I EPGRYF ETAF L T +IGKRVRG
Sbjct: 258 GGGFTSGPPFEAAALKINAAIQASFGNE-EGLVVIGEPGRYFAETAFTLATRIIGKRVRG 316

Query: 312 EQIDYWIDDGVHGSFNLGAYDRASLS 337
           +  +YWIDDG++G+ N   +D A+++
Sbjct: 317 DVREYWIDDGIYGTLNNIVFDYATVT 342


>Glyma04g02230.1 
          Length = 459

 Score =  348 bits (893), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 172/329 (52%), Positives = 234/329 (71%), Gaps = 4/329 (1%)

Query: 12  NSSSLKAISEASRLKGQQVVQI--QKAALYSLIKSI-SDNQEEAEPFYLIDLGVVIRLMD 68
           N  S   I  AS +KG++V  +  +K  L   I+ I +D  +   PF ++DLGVV+ LMD
Sbjct: 40  NQKSPPPIFCASGIKGKRVTALSAEKNGLTDFIQRIIADKPDIDTPFSVLDLGVVMGLMD 99

Query: 69  KWNQSLPNVKPFYAVKCNTEPALLLSLATLGANFDCASQAEIETILGLGVNPDRIVYANP 128
           +W   LP V+PFYAVKCN   +L+ +LA LG++FDCAS+AEIE++L LGV+PDRI+YANP
Sbjct: 100 QWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRIIYANP 159

Query: 129 CKSASHIKYAARVGVNLTTFDSKQEIDKIKKWHPKCELLLRLKVPSENSSWRSFGNKYGA 188
           CKS SHI+YAA VGVN+TT+DS  E++KI+K HP CELLLR+K P ++ +  S G KYGA
Sbjct: 160 CKSESHIRYAASVGVNVTTYDSIDEVEKIRKCHPTCELLLRIKPPQDSGARTSLGLKYGA 219

Query: 189 LTEEVASLLQHANQAGLKVVGVSFHVGSIASDPQVYHSAIATARFAFDTAIKLEMPAMHI 248
           L EEV  LLQ A++AGLKV GVSFH+GS  +D + YH AI+ A+  F++A +L +P M +
Sbjct: 220 LPEEVDELLQAAHEAGLKVTGVSFHIGSGGADTRAYHGAISAAKNVFESASRLGLPRMGV 279

Query: 249 LNIGGGFRANPLFDEIGKTVNDSVQEFFPDELTSLTMIAEPGRYFVETAFILVTNVIGKR 308
           L+IGGGF + P F+     +N +++  F  E   L +I EPGRYF ETAF L T VIGKR
Sbjct: 280 LDIGGGFTSGPSFEAAALKINAAIEGSFGKE-EGLVVIGEPGRYFAETAFTLATRVIGKR 338

Query: 309 VRGEQIDYWIDDGVHGSFNLGAYDRASLS 337
           VRG+  +YWIDDG++G+ N   +D A+++
Sbjct: 339 VRGDVREYWIDDGIYGTLNNIVFDYATVT 367


>Glyma19g36580.1 
          Length = 488

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 32/293 (10%)

Query: 51  EAEPFYLIDLGVVIRLMDKWNQSLPNVKPF--YAVKCNTEPALLLSLATLGANFDCASQA 108
           E  PFYL     + R ++ +  +L  +     YA+K N    +L  L  LG      S  
Sbjct: 94  ERRPFYLYSKPQITRNVEAYKDALEGLNSIIGYAIKANNNLKILEHLRHLGCGAVLVSGN 153

Query: 109 EIETILGLGVNPDRIVYANPCKSASHIKYAARVGVNL---TTFDSKQEIDKIKKWHPKCE 165
           E++  L  G +P R ++    K    +  AA+ GV +   + FD +  ++  K+   K  
Sbjct: 154 ELKLALRAGFDPTRCIFNGNGKILEDLVLAAQEGVFVNIDSEFDLENIVEAAKRAGKKVN 213

Query: 166 LLLRLK--VPSENSSWRSFGN---KYGALTEEVASLL----QHANQAGLKVVGVSFHVGS 216
           +LLR+   V  +   + + GN   K+G   E++   L    +H N+  LK+VG   H+GS
Sbjct: 214 VLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQCFLDAVKEHPNE--LKLVGAHCHLGS 271

Query: 217 IASDPQVYHSAIATARFAFDTAIKLEMPAMHILNIGGGFRAN--------PLFDEIGKTV 268
             +   ++  A AT    +   I+ +   +  LNIGGG   +        P   ++  TV
Sbjct: 272 TITKVDIFRDA-ATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTV 330

Query: 269 NDSVQEFFPDELTSLTMIAEPGRYFVETAFILVTNVIGKRVRGEQIDYWIDDG 321
            D V          L +I EPGR  +     LV  V G +  G + ++ + DG
Sbjct: 331 RDLVIS------RGLNLIIEPGRSLIANTCCLVNRVTGVKTNGSK-NFIVIDG 376


>Glyma13g20390.1 
          Length = 488

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 126/289 (43%), Gaps = 24/289 (8%)

Query: 51  EAEPFYLIDLGVVIRLMDKWNQSLPNVKPF--YAVKCNTEPALLLSLATLGANFDCASQA 108
           E  PFYL     + R ++ +  +L  ++    YA+K N    +L  L  LG      S  
Sbjct: 94  ERRPFYLYSKPQITRNVEAYKDALEGLRSIIGYAIKANNNLKILEHLRQLGCGAVLVSGN 153

Query: 109 EIETILGLGVNPDRIVYANPCKSASHIKYAARVGVNL---TTFDSKQEIDKIKKWHPKCE 165
           E+   L  G +P R ++    K    +  AA+ GV +   + FD +  I   K    +  
Sbjct: 154 ELRLALRAGFDPTRCIFNGNGKVLDDLVLAAKEGVFVNIDSEFDLENIIAAAKIAQKRVN 213

Query: 166 LLLRLK--VPSENSSWRSFGN---KYGALTEEVASLL----QHANQAGLKVVGVSFHVGS 216
           +LLR+   V  +   + + GN   K+G   E++   L    +H N+  LK+VG   H+GS
Sbjct: 214 VLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKEHPNE--LKLVGAHCHLGS 271

Query: 217 IASDPQVYHSAIATARFAFDTAIKLEMPAMHILNIGGG----FRANPLFDEIGKTVNDSV 272
             +   ++  A A     +   I+ +   +  LNIGGG    ++ +       + + D+V
Sbjct: 272 TITKVDIFRDA-AIIMVNYIDQIRAQGFEVDYLNIGGGLGIDYQHSGAVLPTPRDLIDTV 330

Query: 273 QEFFPDELTSLTMIAEPGRYFVETAFILVTNVIGKRVRGEQIDYWIDDG 321
           +E        L +I EPGR  V     LV  V G +  G + ++ + DG
Sbjct: 331 RELVLSR--GLNLIIEPGRSLVANTCCLVNRVTGVKTNGSK-NFIVIDG 376


>Glyma03g33830.1 
          Length = 488

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 123/292 (42%), Gaps = 30/292 (10%)

Query: 51  EAEPFYLIDLGVVIRLMDKWNQSLPNVKPF--YAVKCNTEPALLLSLATLGANFDCASQA 108
           E  PFYL     + R ++ +  +L  +     YA+K N    +L  L  LG      S  
Sbjct: 94  ERRPFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNLKILEHLRHLGCGAVLVSGN 153

Query: 109 EIETILGLGVNPDRIVYANPCKSASHIKYAARVGVNLTTFDSKQEIDKI----KKWHPKC 164
           E+   L  G +P R ++    K    +  AA+ GV     DS+ +++ I    K+   K 
Sbjct: 154 ELRLALRAGFDPTRCIFNGNGKILEDLVLAAQEGV-FVNIDSEFDLENITEAAKRAGKKV 212

Query: 165 ELLLRLK--VPSENSSWRSFGN---KYGALTEEVASLLQHANQAG--LKVVGVSFHVGSI 217
            +LLR+   V  +   + + GN   K+G   E++   L    +    LK+VG   H+GS 
Sbjct: 213 NVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKELPNELKLVGAHCHLGST 272

Query: 218 ASDPQVYHSAIATARFAFDTAIKLEMPAMHILNIGGGFRAN--------PLFDEIGKTVN 269
            +   ++  A AT    +   I+ +   +  LNIGGG   +        P   ++  TV 
Sbjct: 273 ITKVDIFRDA-ATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTVR 331

Query: 270 DSVQEFFPDELTSLTMIAEPGRYFVETAFILVTNVIGKRVRGEQIDYWIDDG 321
           D V          L +I EPGR  +     LV  V G +  G + ++ + DG
Sbjct: 332 DLVIS------RGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSK-NFIVIDG 376


>Glyma03g33830.2 
          Length = 463

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 123/292 (42%), Gaps = 30/292 (10%)

Query: 51  EAEPFYLIDLGVVIRLMDKWNQSLPNVKPF--YAVKCNTEPALLLSLATLGANFDCASQA 108
           E  PFYL     + R ++ +  +L  +     YA+K N    +L  L  LG      S  
Sbjct: 94  ERRPFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNLKILEHLRHLGCGAVLVSGN 153

Query: 109 EIETILGLGVNPDRIVYANPCKSASHIKYAARVGVNLTTFDSKQEIDKI----KKWHPKC 164
           E+   L  G +P R ++    K    +  AA+ GV     DS+ +++ I    K+   K 
Sbjct: 154 ELRLALRAGFDPTRCIFNGNGKILEDLVLAAQEGV-FVNIDSEFDLENITEAAKRAGKKV 212

Query: 165 ELLLRLK--VPSENSSWRSFGN---KYGALTEEVASLLQHANQAG--LKVVGVSFHVGSI 217
            +LLR+   V  +   + + GN   K+G   E++   L    +    LK+VG   H+GS 
Sbjct: 213 NVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKELPNELKLVGAHCHLGST 272

Query: 218 ASDPQVYHSAIATARFAFDTAIKLEMPAMHILNIGGGFRAN--------PLFDEIGKTVN 269
            +   ++  A AT    +   I+ +   +  LNIGGG   +        P   ++  TV 
Sbjct: 273 ITKVDIFRDA-ATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTVR 331

Query: 270 DSVQEFFPDELTSLTMIAEPGRYFVETAFILVTNVIGKRVRGEQIDYWIDDG 321
           D V          L +I EPGR  +     LV  V G +  G + ++ + DG
Sbjct: 332 DLVIS------RGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSK-NFIVIDG 376