Jatropha Genome Database

JcCB0549071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0549071.10 + phase: 2 /partial
         (186 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g07540.1                                                       325   2e-89
Glyma03g07540.3                                                       310   4e-85
Glyma03g07540.2                                                       292   1e-79
Glyma18g43240.1                                                       274   4e-74
Glyma07g18370.1                                                       246   7e-66
Glyma01g24420.1                                                       130   7e-31
Glyma04g12650.1                                                        83   1e-16
Glyma12g07570.1                                                        81   6e-16
Glyma11g15900.1                                                        79   3e-15

>Glyma03g07540.1 
          Length = 437

 Score =  325 bits (832), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 153/185 (82%), Positives = 167/185 (90%), Gaps = 2/185 (1%)

Query: 1   VRMKVRECMEKEVAPIMAEYWEKASFPFHVIPKLGSLRIAGGTIKGYGCPGMSLAGSAIA 60
           +R KVRECMEKE+APIM EYWEKA FPFHVIPKLG+LRIAGGTIK YGCPG+S+ GSAIA
Sbjct: 62  IRKKVRECMEKEIAPIMTEYWEKAKFPFHVIPKLGALRIAGGTIKDYGCPGLSITGSAIA 121

Query: 61  TAEVARVDASCSTFILVHSSLAMLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDYGS 120
            AEVARVDASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL T+ACWALTEPDYGS
Sbjct: 122 VAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLQTVACWALTEPDYGS 181

Query: 121 DASALKTTANKVEGGWVLEGQKRWIGNSTFADLLVIFARNTSTNQINGYVSYYTKVCPMI 180
           DASALKTTA KVEGGW+LEGQKRWIGNSTFAD+LV+FARN STNQING++    K  P +
Sbjct: 182 DASALKTTATKVEGGWILEGQKRWIGNSTFADVLVVFARNASTNQINGFI--IKKDAPGL 239

Query: 181 SMTII 185
           ++T I
Sbjct: 240 TVTKI 244


>Glyma03g07540.3 
          Length = 368

 Score =  310 bits (795), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 147/177 (83%), Positives = 160/177 (90%), Gaps = 2/177 (1%)

Query: 9   MEKEVAPIMAEYWEKASFPFHVIPKLGSLRIAGGTIKGYGCPGMSLAGSAIATAEVARVD 68
           MEKE+APIM EYWEKA FPFHVIPKLG+LRIAGGTIK YGCPG+S+ GSAIA AEVARVD
Sbjct: 1   MEKEIAPIMTEYWEKAKFPFHVIPKLGALRIAGGTIKDYGCPGLSITGSAIAVAEVARVD 60

Query: 69  ASCSTFILVHSSLAMLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDYGSDASALKTT 128
           ASCSTFILVHSSLAMLTIALCGSE QKQKYLPSLAQL T+ACWALTEPDYGSDASALKTT
Sbjct: 61  ASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLQTVACWALTEPDYGSDASALKTT 120

Query: 129 ANKVEGGWVLEGQKRWIGNSTFADLLVIFARNTSTNQINGYVSYYTKVCPMISMTII 185
           A KVEGGW+LEGQKRWIGNSTFAD+LV+FARN STNQING++    K  P +++T I
Sbjct: 121 ATKVEGGWILEGQKRWIGNSTFADVLVVFARNASTNQINGFI--IKKDAPGLTVTKI 175


>Glyma03g07540.2 
          Length = 365

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 152/168 (90%), Gaps = 2/168 (1%)

Query: 18  AEYWEKASFPFHVIPKLGSLRIAGGTIKGYGCPGMSLAGSAIATAEVARVDASCSTFILV 77
           ++YWEKA FPFHVIPKLG+LRIAGGTIK YGCPG+S+ GSAIA AEVARVDASCSTFILV
Sbjct: 7   SQYWEKAKFPFHVIPKLGALRIAGGTIKDYGCPGLSITGSAIAVAEVARVDASCSTFILV 66

Query: 78  HSSLAMLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDYGSDASALKTTANKVEGGWV 137
           HSSLAMLTIALCGSE QKQKYLPSLAQL T+ACWALTEPDYGSDASALKTTA KVEGGW+
Sbjct: 67  HSSLAMLTIALCGSEAQKQKYLPSLAQLQTVACWALTEPDYGSDASALKTTATKVEGGWI 126

Query: 138 LEGQKRWIGNSTFADLLVIFARNTSTNQINGYVSYYTKVCPMISMTII 185
           LEGQKRWIGNSTFAD+LV+FARN STNQING++    K  P +++T I
Sbjct: 127 LEGQKRWIGNSTFADVLVVFARNASTNQINGFI--IKKDAPGLTVTKI 172


>Glyma18g43240.1 
          Length = 451

 Score =  274 bits (701), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 147/200 (73%), Positives = 158/200 (79%), Gaps = 30/200 (15%)

Query: 1   VRMKVRECMEKEVAPIMAE------------------------------YWEKASFPFHV 30
           VR +VRECMEKE+APIM E                              YWEKA FPFHV
Sbjct: 46  VRNRVRECMEKEIAPIMTEACLNPKSYLRERKEYYLDQRLVGLYSSCLKYWEKAEFPFHV 105

Query: 31  IPKLGSLRIAGGTIKGYGCPGMSLAGSAIATAEVARVDASCSTFILVHSSLAMLTIALCG 90
           IPK  +LRIAGGTIKGYGCP +S+AGSA+A AEVARVDASCSTF LVHSSLAMLTIALCG
Sbjct: 106 IPKFAALRIAGGTIKGYGCPDLSIAGSAVAAAEVARVDASCSTFFLVHSSLAMLTIALCG 165

Query: 91  SEVQKQKYLPSLAQLSTIACWALTEPDYGSDASALKTTANKVEGGWVLEGQKRWIGNSTF 150
           SE QKQKYLPSLAQ+ TIACWALTEPDYGSDASALKTTA KVEGGW+L+GQKRWIGNSTF
Sbjct: 166 SEAQKQKYLPSLAQMKTIACWALTEPDYGSDASALKTTATKVEGGWILDGQKRWIGNSTF 225

Query: 151 ADLLVIFARNTSTNQINGYV 170
           ADLLVIFARN +TNQINGY+
Sbjct: 226 ADLLVIFARNMTTNQINGYI 245


>Glyma07g18370.1 
          Length = 460

 Score =  246 bits (629), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 132/215 (61%), Positives = 143/215 (66%), Gaps = 51/215 (23%)

Query: 1   VRMKVRECMEKEVAPIMAE----------------------------------------- 19
           VR KVRECMEKE+APIM E                                         
Sbjct: 46  VRNKVRECMEKEIAPIMTEASVIPYNWITILSVLFISYVRIAVHLHPFQKYIQNKQYKEY 105

Query: 20  ----YWEKASFPFHVIPKLGSLRIAGGTIKGYGCPGMSLAGSAIATAEVARVDASCSTFI 75
               YWEKA FPFHVIPK  +LRIAGGTIKGYGCPG+S+ GSA+ATAEVARVDASCSTF 
Sbjct: 106 PYPKYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPGLSITGSAVATAEVARVDASCSTFY 165

Query: 76  LVHSSLAMLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDYGSDASALKTTANKVEGG 135
           LVHSSLAMLTIALCGSE QKQKYLPSLAQ+ TIA  +   P     AS L      V GG
Sbjct: 166 LVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIAYHSNKAP--MPYASYLPV----VGGG 219

Query: 136 WVLEGQKRWIGNSTFADLLVIFARNTSTNQINGYV 170
           W+L+GQKRWIGNSTFADLLVIFARNT+TNQINGY+
Sbjct: 220 WILDGQKRWIGNSTFADLLVIFARNTTTNQINGYI 254


>Glyma01g24420.1 
          Length = 301

 Score =  130 bits (327), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 75/99 (75%)

Query: 83  MLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDYGSDASALKTTANKVEGGWVLEGQK 142
           +   ++  +E +KQKYLPSLAQ+  IACWA T+ DYG+DA+ALKTT  K+ GGW+L+GQK
Sbjct: 116 LFQYSIVWAEARKQKYLPSLAQMKAIACWAFTKLDYGNDANALKTTTTKMGGGWILDGQK 175

Query: 143 RWIGNSTFADLLVIFARNTSTNQINGYVSYYTKVCPMIS 181
           RWIGN+TFA LLVIF RNT+TNQING    Y +   ++ 
Sbjct: 176 RWIGNNTFAGLLVIFTRNTTTNQINGLRKNYIETFKILD 214


>Glyma04g12650.1 
          Length = 57

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 6/62 (9%)

Query: 48  GCPGMSLAGSAIATAEVARVDASCSTFILVHSSLAMLTIALCGSEVQKQKYLPSLAQLST 107
           GC G+S+ GS +ATAEVARVDA+CSTF LVH SLAM TIA      QKQKYL SLAQ+ T
Sbjct: 1   GCHGLSITGSVVATAEVARVDANCSTFYLVHCSLAMFTIA------QKQKYLSSLAQMKT 54

Query: 108 IA 109
           IA
Sbjct: 55  IA 56


>Glyma12g07570.1 
          Length = 336

 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 62/114 (54%)

Query: 59  IATAEVARVDASCSTFILVHSSLAMLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDY 118
           IA  E++R   S       HS+L +  +   GS VQK+KYLP L     +   A++EP+ 
Sbjct: 27  IAMEEISRASGSVGLSYGAHSNLCINQLVRNGSPVQKEKYLPKLISGDHVGALAMSEPNS 86

Query: 119 GSDASALKTTANKVEGGWVLEGQKRWIGNSTFADLLVIFARNTSTNQINGYVSY 172
           GSD  ++K  A++V+GG+VL G K W  N   A  LV++A+   T    G  ++
Sbjct: 87  GSDVVSMKCKADRVDGGYVLNGNKMWCTNGPVAQTLVVYAKTDITAGSKGITAF 140


>Glyma11g15900.1 
          Length = 410

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 61/114 (53%)

Query: 59  IATAEVARVDASCSTFILVHSSLAMLTIALCGSEVQKQKYLPSLAQLSTIACWALTEPDY 118
           IA  E++R   S       HS+L +  +   GS  QK+KYLP L     +   A++EP+ 
Sbjct: 100 IAMEEISRASGSVGLSYGAHSNLCINQLVRNGSPAQKEKYLPKLISGDHVGALAMSEPNS 159

Query: 119 GSDASALKTTANKVEGGWVLEGQKRWIGNSTFADLLVIFARNTSTNQINGYVSY 172
           GSD  ++K  A++V+GG+VL G K W  N   A  LV++A+   T    G  ++
Sbjct: 160 GSDVVSMKCKADRVDGGYVLNGNKMWCTNGPVAQTLVVYAKTDITAGSKGITAF 213