Jatropha Genome Database

JcCB0545461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0545461.10 - phase: 0 /partial
         (264 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33640.1                                                       102   6e-22
Glyma03g30790.1                                                        97   2e-20
Glyma10g02980.1                                                        77   2e-14
Glyma02g16810.2                                                        64   2e-10
Glyma02g16810.1                                                        64   2e-10
Glyma12g02980.1                                                        62   5e-10
Glyma11g10670.1                                                        62   7e-10

>Glyma19g33640.1 
          Length = 1365

 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 100/196 (51%), Gaps = 14/196 (7%)

Query: 79  EEAKGLKYEKRRKEASYASISDHHLHHSGVLVAQSSPVPADGXXXXXXXXXXXXXXCHVS 138
           E  K +K++ + ++ +  SIS+ +    G LV  SSP   DG              C++S
Sbjct: 707 EVVKEVKFKGQEEDMNSVSISNDYSGEKGNLVILSSPSLTDGRVFLPLGSPPNTSVCNIS 766

Query: 139 TSESANFVQHSGCSTPNHSHQKTTVCTSVEEEKIELLVPQLAKSAGRWSNYAEAHAALSS 198
           TS+S+N +Q+  CS     HQK T+    +  K  ++    ++S G+ +   +A  AL  
Sbjct: 767 TSDSSNILQNGSCSP--DVHQKNTLSGPTDGWKDGIVENGRSRSVGKSTEAGDA--ALLY 822

Query: 199 FEGTLGSFDQDKGEHRSSNS----------HSHVVEILARHLESESSLHRRVDLFFLVDS 248
           FE TL +  + K     +             + V+EIL   LE ESSLHRRVDLFFLVDS
Sbjct: 823 FEATLRTLKRTKESIGRATRIAIDCAKFGIATKVMEILVHDLEIESSLHRRVDLFFLVDS 882

Query: 249 ITQCSRGLKGKVLSLC 264
           I QCSRGLK K   +C
Sbjct: 883 IAQCSRGLKAKTKRIC 898


>Glyma03g30790.1 
          Length = 1299

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 18/235 (7%)

Query: 36  EASKVTSQNGSNVLQYSAEDTGCENTESLRSPIHGNNQVDGMSEEAKGLKYEKRRKEASY 95
           E+ K+  +N  NV Q       CE+   ++  +  +++ +   E  K +K++ + ++ + 
Sbjct: 605 ESDKLVPKNSINVTQNVV--VACEDM--MKHAVGDSSKPNDTHEVIKEVKFKGQEEDMNS 660

Query: 96  ASISDHHLHHSGVLVAQSSPVPADGXXXXXXXXXXXXXXCHVSTSESANFVQHSGCSTPN 155
            SIS+ +    G L   SSP   D               C++STS+S+N +Q+  CS   
Sbjct: 661 VSISNDYSDEKGNLGILSSPSLTDVRVCLPLGSPPITSVCNISTSDSSNILQNGSCSP-- 718

Query: 156 HSHQKTTVCTSVEEEKIELLVPQLAKSAGRWSNYAEAHAALSSFEGTLGSFDQDKGEHRS 215
             HQK T+    +  K  ++  + ++S G+ +   +A  AL  FE TL +  + K     
Sbjct: 719 DVHQKNTLSGPTDGWKDGIVENEQSRSEGKSTEAGDA--ALLYFEATLRTLKRTKESIGR 776

Query: 216 SNS----------HSHVVEILARHLESESSLHRRVDLFFLVDSITQCSRGLKGKV 260
           +             + V+EI+  +LE ESSLHRRVDLFFLVDSI QCSRGLKG +
Sbjct: 777 ATRIAIDCAKFGIATKVMEIVVHNLEIESSLHRRVDLFFLVDSIAQCSRGLKGDI 831


>Glyma10g02980.1 
          Length = 1276

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 71/135 (52%), Gaps = 13/135 (9%)

Query: 137 VSTSESANFVQHSGCSTPN-HSHQKTTVCTSVEEEKIELLVPQLAKSAGRWSNYAEAHAA 195
           + TS   + + H+G  +P+ H HQK  VC  V+  K   +  Q +   G+ +      AA
Sbjct: 694 IGTSNDISNILHNGSCSPDVHLHQKQIVCGPVDGSKDGDVAIQQSICMGKSTE--AGRAA 751

Query: 196 LSSFEGTLGSFDQDKGEHRSSNSHS----------HVVEILARHLESESSLHRRVDLFFL 245
           L  FE  LG+  + K     +   +           V+EILA  LE ESS+HRRVDLFFL
Sbjct: 752 LLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIADKVMEILAHCLEMESSVHRRVDLFFL 811

Query: 246 VDSITQCSRGLKGKV 260
           VDSI Q SRGLKG V
Sbjct: 812 VDSIAQFSRGLKGDV 826


>Glyma02g16810.2 
          Length = 1358

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 33/39 (84%)

Query: 222 VVEILARHLESESSLHRRVDLFFLVDSITQCSRGLKGKV 260
           V+EILA  LE ESS+HRRVDLFFLVDSI Q SRGLKG V
Sbjct: 859 VMEILAHCLEMESSVHRRVDLFFLVDSIAQFSRGLKGDV 897


>Glyma02g16810.1 
          Length = 1358

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 33/39 (84%)

Query: 222 VVEILARHLESESSLHRRVDLFFLVDSITQCSRGLKGKV 260
           V+EILA  LE ESS+HRRVDLFFLVDSI Q SRGLKG V
Sbjct: 859 VMEILAHCLEMESSVHRRVDLFFLVDSIAQFSRGLKGDV 897


>Glyma12g02980.1 
          Length = 1366

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 31/37 (83%)

Query: 222 VVEILARHLESESSLHRRVDLFFLVDSITQCSRGLKG 258
           VVE+L R LE+E+S HR+VDLFFLVDSITQCS   KG
Sbjct: 797 VVELLIRKLETETSFHRKVDLFFLVDSITQCSHNQKG 833


>Glyma11g10670.1 
          Length = 1266

 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 31/37 (83%)

Query: 222 VVEILARHLESESSLHRRVDLFFLVDSITQCSRGLKG 258
           VVE+L R LE+E+S HR+VDLFFLVDSITQCS   KG
Sbjct: 689 VVELLIRKLETETSFHRKVDLFFLVDSITQCSHNQKG 725