Jatropha Genome Database
- JcCB0545221.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0545221.10 + phase: 1 /partial
(291 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g05280.1 260 1e-69
Glyma17g34980.1 257 1e-68
Glyma14g10530.1 251 6e-67
Glyma08g21110.1 78 9e-15
Glyma07g01600.1 76 5e-14
>Glyma04g05280.1
Length = 714
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/296 (54%), Positives = 188/296 (63%), Gaps = 10/296 (3%)
Query: 3 EKPNHKMECSAENAIGKTSFSSAKNGSQPSNNGSYLGNPPPVPVPTDSKMSPWCFQHSL- 61
EK NHKMECSAENA+GKTS SS K+GS S + GN V DS M PWCF S
Sbjct: 422 EKLNHKMECSAENAVGKTSLSSVKDGSHLSKCTPFPGNQHQTNVAADSGMGPWCFNQSPP 481
Query: 62 GHQWLVPVMSPSEGLVYKPYNAPGFLGSACGGCGPFGASPMVG-NFINPTYGIPPSSHHH 120
GH WL+PVM+PSEGLVYKPY PGF G+ CGG ++G +F+NP YGIP S H
Sbjct: 482 GHPWLIPVMTPSEGLVYKPYPGPGFTGTGCGGGCGPFVPALLGGSFMNPGYGIPTS---H 538
Query: 121 QGTGF----IPGVHGYFPPYGMPVMHPAMSGSAVEQMNYFXXXXXXXXXXXX-XXXXANF 175
QG G PG HGY PPYGMPVM+ +MS S VEQ N F AN
Sbjct: 539 QGVGVPPDTHPGSHGYLPPYGMPVMNSSMSESVVEQGNQFSALGSHGHNGHLPGGGKANH 598
Query: 176 NVQHQSSCNLPNQKSGSVPQVPKFRASKDTELRGSTASSPGERVQGVGTVEAAEGRDALL 235
N ++SSCNLP Q++G++ V K + SKD EL+ ++ASSP E QG+ T + AEGRD L
Sbjct: 599 NTNNKSSCNLPVQRNGAISHVLKHQTSKDFELQETSASSPSEMAQGLSTGQVAEGRDVLP 658
Query: 236 LFPVAPATPEGASQPQETDMPTRVIKVVPHNPRSATESAARIFKSIQAERKHKNSI 291
LFP+ PA PE Q ET TRVIKVVPHN RSAT SAARIF+SIQ RK +S+
Sbjct: 659 LFPMVPAEPESVPQSLETGQHTRVIKVVPHNRRSATASAARIFQSIQEGRKQNDSV 714
>Glyma17g34980.1
Length = 713
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/296 (51%), Positives = 184/296 (62%), Gaps = 20/296 (6%)
Query: 3 EKPNHKMECSAENAIGK-TSFSSAKNGSQPSNNGSYLGNPPPVPVPTDSKMSPWCFQHSL 61
EK NHK ECSAENA+ K TSFSS KNGS +N+ + G P V +D+K SPWCF +
Sbjct: 431 EKLNHKTECSAENAVAKRTSFSSPKNGSHLANHTPFSGTPHQANVASDNKTSPWCFNQTP 490
Query: 62 GHQWLVPVMSPSEGLVYKPYNAPGFLGSACGGC-GPFGASPMVGNFINPTYGIPPSSHHH 120
GHQWL+PVMSPSEGLVYKPY PGF G+ GGC GPFG +P+ F+NP Y P+SH
Sbjct: 491 GHQWLIPVMSPSEGLVYKPYPGPGFKGTMHGGCGGPFGQAPLSATFMNPAYQF-PASHPV 549
Query: 121 QGTG-FI-PGVHGYFPPYGMPVMHPAMSGSAVEQMNYFXXXXXXXXXXXXXXXXANFNVQ 178
G F+ P H YF P+GMPVM+ A SGSAVEQ+N F A+FN
Sbjct: 550 VGVSPFVPPASHTYFAPFGMPVMNQATSGSAVEQVNQFAAQGSHGQNGHSSVEGADFNTH 609
Query: 179 H-QSSCNLPNQKSGSVPQVPKFRASKDTELRGSTASSPGERVQGVGTVEAAEGRDA--LL 235
H QSS NLP QK+G+ V K +A K+ L+GST SSP E QG+ + A+G DA L
Sbjct: 610 HNQSSSNLPVQKNGARLHVKKSQALKERGLQGSTRSSPSEMAQGIRAGKIADGSDAQSLS 669
Query: 236 LFPVAPATPEGASQPQETDMPTRVIKVVPHNPRSATESAARIFKSIQAERKHKNSI 291
L V ET T+ IKVVPHN +SATESAARIF+SIQ ERK + +
Sbjct: 670 LHAV------------ETRQQTQAIKVVPHNRKSATESAARIFQSIQEERKQHDLV 713
>Glyma14g10530.1
Length = 621
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 181/294 (61%), Gaps = 16/294 (5%)
Query: 3 EKPNHKMECSAENAIGKT-SFSSAKNGSQPSNNGSYLGNPPPVPVPTDSKMSPWCFQHSL 61
E NHK ECSAENA+ K SFSS KNGS +N+ + G P +D+K SPWCF +
Sbjct: 339 EVLNHKTECSAENAVAKKKSFSSPKNGSHHTNHTPFSGTPHQANEASDNKTSPWCFNQAP 398
Query: 62 GHQWLVPVMSPSEGLVYKPYNAPGFLGSACGGC-GPFGASPMVGNFINPTYGIPPSSHHH 120
GHQWL+PVMSPSEGLVYKPY PGF+G+ GGC GPFG +P+ F+NP Y P+SH
Sbjct: 399 GHQWLIPVMSPSEGLVYKPYPGPGFMGTMNGGCGGPFGQAPLGATFMNPAYQF-PASHPV 457
Query: 121 QGTG-FI-PGVHGYFPPYGMPVMHPAMSGSAVEQMNYFXXXXXXXXXXXXXXXXANFNVQ 178
G F+ P H YFP +GMPV++ A SGS VEQ+N F +FN
Sbjct: 458 VGVSPFVPPASHAYFPSFGMPVVNQATSGSTVEQVNQFAAQGSHGQNGHSYIEGTDFNTH 517
Query: 179 H-QSSCNLPNQKSGSVPQVPKFRASKDTELRGSTASSPGERVQGVGTVEAAEGRDALLLF 237
H QSS NLP K+G+ V K +ASK+ L+GST SSP E QG+ + AEG DA L
Sbjct: 518 HNQSSSNLPVLKNGATLHVKKSQASKERGLQGSTISSPSEMAQGIRAGKIAEGNDAHSL- 576
Query: 238 PVAPATPEGASQPQETDMPTRVIKVVPHNPRSATESAARIFKSIQAERKHKNSI 291
+ Q ET T+VIKVVPHN +SATESAARIF+SIQ ERK + +
Sbjct: 577 ---------SLQAVETRQQTQVIKVVPHNRKSATESAARIFQSIQEERKQHDLV 621
>Glyma08g21110.1
Length = 620
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 10/85 (11%)
Query: 203 KDTELRGSTASSPGERVQGVGTVEAAEGRDALLLFPVAPATPEGASQPQETDMPTRVIKV 262
KD EL+ STASSP +R+ G +AL LFP+AP + + + + RVIK
Sbjct: 545 KDKELQRSTASSPSKRMSG----------EALPLFPLAPTFWQSEDRNTQVEHRPRVIKA 594
Query: 263 VPHNPRSATESAARIFKSIQAERKH 287
+PHNP++A+ESAARIF+SIQ ERKH
Sbjct: 595 MPHNPKTASESAARIFRSIQEERKH 619
>Glyma07g01600.1
Length = 643
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 10/85 (11%)
Query: 203 KDTELRGSTASSPGERVQGVGTVEAAEGRDALLLFPVAPATPEGASQPQETDMPTRVIKV 262
+D EL STASSP +RV G +AL LFP+AP + + + RVIK
Sbjct: 568 QDKELHRSTASSPSKRVSG----------EALPLFPLAPTCWQSEDTNTQVEQQPRVIKA 617
Query: 263 VPHNPRSATESAARIFKSIQAERKH 287
+PHNP++A+E+AA+IF+SIQ ERKH
Sbjct: 618 MPHNPKTASETAAKIFRSIQEERKH 642
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 28 GSQPSNNGSYLGNPPPVPVPTDSKMSPWCFQHSLGHQWLVPVMSPSEGLVYKPYNAP--- 84
+Q N G +LGNP ++SK SP G+QWLVPVMSPSEGLVYKP P
Sbjct: 467 ANQLPNYGHHLGNPALASADSNSKQSPSYVYPPPGNQWLVPVMSPSEGLVYKPIIWPCPP 526
Query: 85 --GFLG 88
GF+
Sbjct: 527 NAGFMA 532