Jatropha Genome Database

JcCB0544731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0544731.10 - phase: 2 /pseudo/partial
         (235 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g32450.1                                                       173   1e-43
Glyma08g16610.1                                                       168   4e-42

>Glyma05g32450.1 
          Length = 491

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 133/241 (55%), Gaps = 14/241 (5%)

Query: 1   IEKQENNYIEKALERLKSNKNIWVLGKNNSKRKKETSYILLPHIFYNYXXXIFRG----- 55
           IEK+E  YI KA ER  SN NI VLG   +KR+   S+++      +       G     
Sbjct: 259 IEKREQLYINKAFERFGSNPNIEVLGNLKAKRQAILSFLIYSTTTNSS----SAGEWSDG 314

Query: 56  -KRGEEDLNMWAETETKEIXXXXXXXXXXXXXXXXXXXXEVGVPVLVLMVIFLLNINQTT 114
            K  E +L++WAET  +                        G          LL+IN++ 
Sbjct: 315 NKENEGELDLWAETGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLHINKSQ 374

Query: 115 SLAIRSAIQKGYVGVKPGWTRISFPYYMSEEEFEFILAAVEFIAIYGQRFLPLYHFNWKN 174
           SLAIRSA+Q+GY+GVKPGWTR+SFPYYMSEE+FE+IL A+EF+A+YGQRF+PLY FN  N
Sbjct: 375 SLAIRSAVQEGYIGVKPGWTRVSFPYYMSEEDFEYILRAIEFLAVYGQRFIPLYSFNLIN 434

Query: 175 GNWTXXXXXXXXXXXXCGGRIFNKHTSYLEMAKNIANLLPKFPSQRKLPEDLDHNLLXFR 234
           G+W                    +  SY E+AK +A+ LPKFPSQ  L ED+D N+  FR
Sbjct: 435 GSWRLKTEKFEALTK----EDMRRDESYFEVAKCVASGLPKFPSQGILQEDVDPNIFCFR 490

Query: 235 V 235
           V
Sbjct: 491 V 491


>Glyma08g16610.1 
          Length = 487

 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 133/241 (55%), Gaps = 18/241 (7%)

Query: 1   IEKQENNYIEKALERLKSNKNIWVLGKNNSKRKKETSYILLPHIFYNYXXXIFRG----- 55
           IEK+E  YI KALERL SN NI VLG   +KR+   S+++      +       G     
Sbjct: 259 IEKREQLYINKALERLGSNPNIEVLGNLKAKRQAILSFLIYSTTTNS----CSAGEWSDG 314

Query: 56  -KRGEEDLNMWAETETKEIXXXXXXXXXXXXXXXXXXXXEVGVPVLVLMVIFLLNINQTT 114
            K  E +L++WAET  +                        G          LL+IN++ 
Sbjct: 315 NKENEGELDLWAETGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHELLHINKSH 374

Query: 115 SLAIRSAIQKGYVGVKPGWTRISFPYYMSEEEFEFILAAVEFIAIYGQRFLPLYHFNWKN 174
           SLAIRSA+Q+GY+GVKPGWTR+SFPYYMSEE+FE+IL A+EFIA+YGQRF+PLY FN  N
Sbjct: 375 SLAIRSAVQEGYIGVKPGWTRVSFPYYMSEEDFEYILKAIEFIAVYGQRFIPLYSFNLIN 434

Query: 175 GNWTXXXXXXXXXXXXCGGRIFNKHTSYLEMAKNIANLLPKFPSQRKLPEDLDHNLLXFR 234
           G+W                    + T   E+AK +A+ L KFPSQ  L E++D N+  FR
Sbjct: 435 GSWRLKTQKFEAQT--------KEGTDKFEVAKCVASSLRKFPSQGILQEEVDPNIFCFR 486

Query: 235 V 235
           +
Sbjct: 487 I 487