Jatropha Genome Database

JcCB0543221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0543221.10 - phase: 2 /partial
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14960.1                                                       244   3e-65
Glyma04g39930.1                                                       243   5e-65
Glyma04g39930.2                                                       216   5e-57
Glyma02g09630.2                                                        84   6e-17
Glyma02g09630.1                                                        84   6e-17
Glyma10g22680.1                                                        78   3e-15
Glyma20g12510.1                                                        74   5e-14
Glyma10g33710.1                                                        64   7e-11
Glyma10g33710.2                                                        63   1e-10
Glyma20g33880.1                                                        55   3e-08

>Glyma06g14960.1 
          Length = 241

 Score =  244 bits (622), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/147 (78%), Positives = 128/147 (87%)

Query: 1   GLKTFSLPDLANDYSALEPVISAEIMQLHHQKHHQTYITNYNKSLELLNEAMNKGDSASV 60
           GL  ++LPDL  DY ALEP IS +IMQLHHQKHHQTYITNYNK+LE L +A+ K DS++V
Sbjct: 37  GLHVYTLPDLDYDYGALEPAISGDIMQLHHQKHHQTYITNYNKALEQLQDAIAKKDSSAV 96

Query: 61  VKLQSAIKFNGGGHINHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTE 120
           VKLQ AIKFNGGGH+NHSIFWKNLAPVREGGGEPP GSLGWAID  FGS E LIQK++ E
Sbjct: 97  VKLQGAIKFNGGGHVNHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALIQKVNAE 156

Query: 121 GAAVQGSGWVWLGLDKEAKKLVVETTA 147
           GAA+QGSGWVWLGLDKE K+LVVETTA
Sbjct: 157 GAALQGSGWVWLGLDKELKRLVVETTA 183


>Glyma04g39930.1 
          Length = 240

 Score =  243 bits (620), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 128/147 (87%)

Query: 1   GLKTFSLPDLANDYSALEPVISAEIMQLHHQKHHQTYITNYNKSLELLNEAMNKGDSASV 60
           GL  ++LPDL  DY ALEP IS EIMQLHHQKHHQTYITN+NK+LE L +A+ K DS++V
Sbjct: 36  GLHVYTLPDLDYDYGALEPAISGEIMQLHHQKHHQTYITNFNKALEQLQDAVAKKDSSAV 95

Query: 61  VKLQSAIKFNGGGHINHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTE 120
           VKLQ AIKFNGGGH+NHSIFWKNLAPVREGGGEPP GSLGWAID  FGS E L+QK++ E
Sbjct: 96  VKLQGAIKFNGGGHVNHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALVQKVNAE 155

Query: 121 GAAVQGSGWVWLGLDKEAKKLVVETTA 147
           GAA+QGSGWVWLGLDKE K+LVVETTA
Sbjct: 156 GAALQGSGWVWLGLDKELKRLVVETTA 182


>Glyma04g39930.2 
          Length = 183

 Score =  216 bits (551), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 101/137 (73%), Positives = 114/137 (83%)

Query: 1   GLKTFSLPDLANDYSALEPVISAEIMQLHHQKHHQTYITNYNKSLELLNEAMNKGDSASV 60
           GL  ++LPDL  DY ALEP IS EIMQLHHQKHHQTYITN+NK+LE L +A+ K DS++V
Sbjct: 36  GLHVYTLPDLDYDYGALEPAISGEIMQLHHQKHHQTYITNFNKALEQLQDAVAKKDSSAV 95

Query: 61  VKLQSAIKFNGGGHINHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTE 120
           VKLQ AIKFNGGGH+NHSIFWKNLAPVREGGGEPP GSLGWAID  FGS E L+QK++ E
Sbjct: 96  VKLQGAIKFNGGGHVNHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALVQKVNAE 155

Query: 121 GAAVQGSGWVWLGLDKE 137
           GAA+QGSGWV    D E
Sbjct: 156 GAALQGSGWVVSCADSE 172


>Glyma02g09630.2 
          Length = 310

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 9/139 (6%)

Query: 15  SALEPVISAEIMQLHHQKHHQTYITNYNKSLELLNEAMNKGDSASVVKLQSA---IKFNG 71
           SALEP++S E ++ H  KHH+TY+ N N+ ++  +   N  ++  V+          FN 
Sbjct: 64  SALEPIMSQETLEYHWGKHHRTYVDNLNRQIDGTDLDGNSLENTIVITYNKGDILPAFNN 123

Query: 72  GGHI-NHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGAAVQGSGWV 130
                NH  FW+++ P   GGG  P G L   I+ DFGS EK + +  T  +   GSGW 
Sbjct: 124 AAQAWNHDFFWESMKP---GGGGRPSGDLLNLIERDFGSFEKFLDEFKTAASTQFGSGWA 180

Query: 131 WLGLDKEAKKLVVETTAKP 149
           WL   KE+ +L VE    P
Sbjct: 181 WLAY-KES-RLDVENAVNP 197


>Glyma02g09630.1 
          Length = 313

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 9/139 (6%)

Query: 15  SALEPVISAEIMQLHHQKHHQTYITNYNKSLELLNEAMNKGDSASVVKLQSA---IKFNG 71
           SALEP++S E ++ H  KHH+TY+ N N+ ++  +   N  ++  V+          FN 
Sbjct: 67  SALEPIMSQETLEYHWGKHHRTYVDNLNRQIDGTDLDGNSLENTIVITYNKGDILPAFNN 126

Query: 72  GGHI-NHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGAAVQGSGWV 130
                NH  FW+++ P   GGG  P G L   I+ DFGS EK + +  T  +   GSGW 
Sbjct: 127 AAQAWNHDFFWESMKP---GGGGRPSGDLLNLIERDFGSFEKFLDEFKTAASTQFGSGWA 183

Query: 131 WLGLDKEAKKLVVETTAKP 149
           WL   KE+ +L VE    P
Sbjct: 184 WLAY-KES-RLDVENAVNP 200


>Glyma10g22680.1 
          Length = 272

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 12/133 (9%)

Query: 15  SALEPVISAEIMQLHHQKHHQTYITNYNKSLELLNEAMNKGDSASVV---KLQSAIKFNG 71
           ++LEP++S E ++ H  KHH+TY+ N N+ ++  +   N  +   V+   K      FN 
Sbjct: 23  NSLEPIMSEETIEYHWGKHHRTYVDNLNRQIDGTDLDGNSLEDTMVILYNKGDILPAFNN 82

Query: 72  GGHI-----NHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGAAVQG 126
                    NH  FW+++ P   GGG  P G L   I+ DFGSL+K + +  T  +A  G
Sbjct: 83  AAQACMLAWNHDFFWESMKP---GGGGRPSGELLKLIERDFGSLKKFLDEFKTAASAQFG 139

Query: 127 SGWVWLGLDKEAK 139
           SGW WL   KE++
Sbjct: 140 SGWAWLAY-KESR 151


>Glyma20g12510.1 
          Length = 262

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 15  SALEPVISAEIMQLHHQKHHQTYITNYNKSLE----LLNEAMNKGDSASVVKLQSAIKFN 70
            ALEP +S   + +H  ++HQ +I   NK LE    L    +++    +        +FN
Sbjct: 59  DALEPYMSKRTIDMHWGEYHQNFIEGLNKQLEKDDILYGYTLDELVKVTYNNGNPLPEFN 118

Query: 71  GGGHI-NHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGAAVQGSGW 129
               + NH  FW+++ P   GGG+ P   L   I++DFGS     +K      ++ GSGW
Sbjct: 119 NAAEVWNHDFFWESMQP---GGGDMPKLGLLQQIEKDFGSFTNFREKFIGAALSLFGSGW 175

Query: 130 VWLGLDKEAKKLVVETTA 147
           VWL L +E K+L +  T+
Sbjct: 176 VWLVLKREEKRLEIVKTS 193


>Glyma10g33710.1 
          Length = 244

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 63/147 (42%), Gaps = 25/147 (17%)

Query: 15  SALEPVISAEIMQLHHQKHHQTYITNYNKSL-----------ELLNEAMNKGDSASVVKL 63
           + LEPV+S + ++ H  KHH+TY+ N  K +           E++  + NKGD       
Sbjct: 38  NGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTELDGKSLEEIIVTSYNKGDILPA--- 94

Query: 64  QSAIKFNGGGHI-NHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGA 122
                FN    + NH  FW+ + P   G        L   I+ DFGS EK + +     A
Sbjct: 95  -----FNNAAQVWNHDFFWECMKPGGGGKPSGELLEL---IERDFGSFEKFLDEFKAAAA 146

Query: 123 AVQGSGWVWLGLDKEAKKLVVETTAKP 149
              GSGW WL     A K   E  A P
Sbjct: 147 TQFGSGWAWLAY--RASKFDGENAANP 171


>Glyma10g33710.2 
          Length = 210

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 25/147 (17%)

Query: 15  SALEPVISAEIMQLHHQKHHQTYITNYNKSL-----------ELLNEAMNKGDSASVVKL 63
           + LEPV+S + ++ H  KHH+TY+ N  K +           E++  + NKGD       
Sbjct: 38  NGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTELDGKSLEEIIVTSYNKGDILPA--- 94

Query: 64  QSAIKFNGGGHI-NHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGA 122
                FN    + NH  FW+ + P   G      G L   I+ DFGS EK + +     A
Sbjct: 95  -----FNNAAQVWNHDFFWECMKPGGGGKP---SGELLELIERDFGSFEKFLDEFKAAAA 146

Query: 123 AVQGSGWVWLGLDKEAKKLVVETTAKP 149
              GSGW WL     A K   E  A P
Sbjct: 147 TQFGSGWAWLAY--RASKFDGENAANP 171


>Glyma20g33880.1 
          Length = 177

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 15/121 (12%)

Query: 17  LEPVISAEIMQLHHQKHHQTYITNYNKSL---ELLNEAMNKGDSASVVKLQSAIKFNGGG 73
           LEPV+S + ++ H  KHH+TY+ N  K +   EL  +++ +    S  K+Q         
Sbjct: 20  LEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTELDGKSLEEIIVTSYNKVQVW------- 72

Query: 74  HINHSIFWKNLAPVREGGGEPPHGSLGWAIDEDFGSLEKLIQKISTEGAAVQGSGWVWLG 133
             NH  FW+ + P   G        L   I+ DFGS  K + +     A   GSGW WL 
Sbjct: 73  --NHDFFWECMKPGGGGKPSGELLEL---IERDFGSFVKFLDEFKAAAATQFGSGWAWLP 127

Query: 134 L 134
           L
Sbjct: 128 L 128