Jatropha Genome Database

JcCB0539681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0539681.10 + phase: 0 /partial
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g20020.1                                                       278   3e-75
Glyma11g05960.1                                                       269   9e-73
Glyma09g00260.2                                                       196   1e-50
Glyma09g00260.1                                                       191   3e-49
Glyma09g00260.3                                                       191   3e-49
Glyma01g39310.1                                                       165   2e-41
Glyma18g40260.1                                                       111   4e-25
Glyma18g30280.1                                                       110   7e-25
Glyma06g21660.1                                                       106   1e-23
Glyma06g21580.1                                                        84   7e-17
Glyma01g41430.3                                                        54   1e-07
Glyma01g41430.2                                                        54   1e-07
Glyma01g41430.1                                                        52   2e-07

>Glyma17g20020.1 
          Length = 669

 Score =  278 bits (710), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 127/143 (88%), Positives = 135/143 (94%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VRK LFG  +A YS YTCYTGIADFVPADIE+VGYRVFLGHKQYFVSSDVGAGKMQWYAF
Sbjct: 255 VRKQLFGLTEAVYSGYTCYTGIADFVPADIETVGYRVFLGHKQYFVSSDVGAGKMQWYAF 314

Query: 61  HKEPPGGVDRPNGKKERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDRTPTLTWGRGRV 120
           HKEPPGGVD PNGKKERLL+IFEGWCDN +DL+LAT+E+AILRRDIYDR PTLTWG+GRV
Sbjct: 315 HKEPPGGVDEPNGKKERLLRIFEGWCDNAVDLILATEEEAILRRDIYDRIPTLTWGKGRV 374

Query: 121 TLLGDSVHAMQPNMGQGGCMAIE 143
           TLLGDSVHAMQPNMGQGGCMAIE
Sbjct: 375 TLLGDSVHAMQPNMGQGGCMAIE 397


>Glyma11g05960.1 
          Length = 654

 Score =  269 bits (688), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 126/151 (83%), Positives = 135/151 (89%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VRK LFG  +ATYS YTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWY F
Sbjct: 240 VRKKLFGQTEATYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYGF 299

Query: 61  HKEPPGGVDRPNGKKERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDRTPTLTWGRGRV 120
           H+EP GG D PNGKKERLLKIF+GWCDNVIDL+ AT+E+AILRRDIYDRTPT TWG+G V
Sbjct: 300 HQEPAGGADIPNGKKERLLKIFKGWCDNVIDLIHATEEEAILRRDIYDRTPTFTWGKGHV 359

Query: 121 TLLGDSVHAMQPNMGQGGCMAIEVNPYFLLE 151
           TLLGDS+HAMQPNMGQGGCMAIE +    LE
Sbjct: 360 TLLGDSIHAMQPNMGQGGCMAIEDSYQLALE 390


>Glyma09g00260.2 
          Length = 477

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/151 (61%), Positives = 110/151 (72%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VR  LFG ++A YS +TCY+G+  +VP  I++VGYRVFLG  QYFV+SDVG GKMQWYAF
Sbjct: 232 VRSKLFGQQEANYSGFTCYSGLTSYVPPYIDTVGYRVFLGLNQYFVASDVGHGKMQWYAF 291

Query: 61  HKEPPGGVDRPNGKKERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDRTPTLTWGRGRV 120
           H EPP     P GKK+RLL +F  WCD VI L+  T E  I++RDIYDR    TWG GRV
Sbjct: 292 HGEPPSSDPFPEGKKKRLLDLFGNWCDEVIALISETPEHMIIQRDIYDRDMINTWGIGRV 351

Query: 121 TLLGDSVHAMQPNMGQGGCMAIEVNPYFLLE 151
           TLLGD+ H MQPN+GQGGCMAIE     +LE
Sbjct: 352 TLLGDAAHPMQPNLGQGGCMAIEDCYQLILE 382


>Glyma09g00260.1 
          Length = 478

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/152 (61%), Positives = 110/152 (72%), Gaps = 1/152 (0%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VR  LFG ++A YS +TCY+G+  +VP  I++VGYRVFLG  QYFV+SDVG GKMQWYAF
Sbjct: 232 VRSKLFGQQEANYSGFTCYSGLTSYVPPYIDTVGYRVFLGLNQYFVASDVGHGKMQWYAF 291

Query: 61  HKEPPGGVDRPN-GKKERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDRTPTLTWGRGR 119
           H EPP     P  GKK+RLL +F  WCD VI L+  T E  I++RDIYDR    TWG GR
Sbjct: 292 HGEPPSSDPFPEAGKKKRLLDLFGNWCDEVIALISETPEHMIIQRDIYDRDMINTWGIGR 351

Query: 120 VTLLGDSVHAMQPNMGQGGCMAIEVNPYFLLE 151
           VTLLGD+ H MQPN+GQGGCMAIE     +LE
Sbjct: 352 VTLLGDAAHPMQPNLGQGGCMAIEDCYQLILE 383


>Glyma09g00260.3 
          Length = 472

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/152 (61%), Positives = 110/152 (72%), Gaps = 1/152 (0%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VR  LFG ++A YS +TCY+G+  +VP  I++VGYRVFLG  QYFV+SDVG GKMQWYAF
Sbjct: 232 VRSKLFGQQEANYSGFTCYSGLTSYVPPYIDTVGYRVFLGLNQYFVASDVGHGKMQWYAF 291

Query: 61  HKEPPGGVDRPN-GKKERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDRTPTLTWGRGR 119
           H EPP     P  GKK+RLL +F  WCD VI L+  T E  I++RDIYDR    TWG GR
Sbjct: 292 HGEPPSSDPFPEAGKKKRLLDLFGNWCDEVIALISETPEHMIIQRDIYDRDMINTWGIGR 351

Query: 120 VTLLGDSVHAMQPNMGQGGCMAIEVNPYFLLE 151
           VTLLGD+ H MQPN+GQGGCMAIE     +LE
Sbjct: 352 VTLLGDAAHPMQPNLGQGGCMAIEDCYQLILE 383


>Glyma01g39310.1 
          Length = 564

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/88 (86%), Positives = 79/88 (89%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VRK LFG  +ATYS YTCYTGIADFVPADIESVGY+VFLGHKQYFVSSDVGAGKMQWY F
Sbjct: 243 VRKKLFGQIEATYSGYTCYTGIADFVPADIESVGYQVFLGHKQYFVSSDVGAGKMQWYGF 302

Query: 61  HKEPPGGVDRPNGKKERLLKIFEGWCDN 88
           H+EP GG D PNGKKER LKIFEGWCDN
Sbjct: 303 HQEPAGGADIPNGKKERFLKIFEGWCDN 330


>Glyma18g40260.1 
          Length = 76

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/89 (60%), Positives = 64/89 (71%), Gaps = 14/89 (15%)

Query: 35  YRVFLGHKQYFVSSDVGAGKMQWYAFHKEPPGGVDRPNGKKERLLKIFEGWCDNVIDLLL 94
           Y+VFLGHKQYFVS +VG GKMQWY FH+EP GG D  NG              +VIDL+ 
Sbjct: 1   YKVFLGHKQYFVSLNVGVGKMQWYGFHQEPAGGADILNG--------------SVIDLIH 46

Query: 95  ATDEDAILRRDIYDRTPTLTWGRGRVTLL 123
           A +++AILR+DIYDRTPT TWG+G VTLL
Sbjct: 47  AIEKEAILRQDIYDRTPTFTWGKGHVTLL 75


>Glyma18g30280.1 
          Length = 89

 Score =  110 bits (275), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 1/89 (1%)

Query: 1  VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
          V   LFG ++A YS +TCY G+  +VP  I++VGYRVFLG  QYFV+SDVG GKMQWYAF
Sbjct: 1  VHSKLFGRQEANYSSFTCYRGLTRYVPPYIDTVGYRVFLGLNQYFVASDVGHGKMQWYAF 60

Query: 61 HKEPPGGVDRPN-GKKERLLKIFEGWCDN 88
          H EPP     P  GKK+RLL +F  WCD 
Sbjct: 61 HGEPPSSDPFPEVGKKKRLLDLFGNWCDE 89


>Glyma06g21660.1 
          Length = 121

 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 3/97 (3%)

Query: 1   VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
           VR  LFG ++A Y  +TCY+G+  +VP  I++V   VFLG  QYFV+SDVG GKMQWYAF
Sbjct: 27  VRSKLFGRQEANYLGFTCYSGLTSYVPPYIDTVS--VFLGLNQYFVASDVGHGKMQWYAF 84

Query: 61  HKEPPGGVDRPN-GKKERLLKIFEGWCDNVIDLLLAT 96
           H EPP     P  GKK RLL +F  WCD VI L+  T
Sbjct: 85  HGEPPSSDPFPKAGKKNRLLDLFGNWCDEVIALISET 121


>Glyma06g21580.1 
          Length = 99

 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 52/96 (54%), Gaps = 20/96 (20%)

Query: 1  VRKNLFGPKDATYSDYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAF 60
          VR  LFG ++A YS +TCY  +                     YFV+SDVG GKM+WYAF
Sbjct: 24 VRSKLFGRQEANYSGFTCYISVL--------------------YFVASDVGHGKMRWYAF 63

Query: 61 HKEPPGGVDRPNGKKERLLKIFEGWCDNVIDLLLAT 96
          H EPP     P GKK RLL +F  WCD +I L+  T
Sbjct: 64 HGEPPSSDPFPKGKKNRLLDLFGNWCDELIALISET 99


>Glyma01g41430.3 
          Length = 320

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 18/146 (12%)

Query: 10  DATYSDYTCYTGIADFVPADIESVGYRVF----LGHKQYFVSSDVGAGKMQWYAFHKEPP 65
           +  Y  +  + G+A +  +D +  G RV      G +  FV   V   K+ W+     P 
Sbjct: 96  EPKYVGHCAFRGLASY--SDGQPFGPRVNYIYGRGLRAGFVP--VSPTKVYWFICFNSPS 151

Query: 66  GGVDRPNGK--KERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDR------TPTLTWGR 117
            G    +    K++  ++ + W   +++++ +T +D +++  + DR      +P+ +   
Sbjct: 152 AGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSAS--A 209

Query: 118 GRVTLLGDSVHAMQPNMGQGGCMAIE 143
           GRV ++GD+ H M PN+GQG C A+E
Sbjct: 210 GRVVVVGDAWHPMTPNLGQGACCALE 235


>Glyma01g41430.2 
          Length = 320

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 18/146 (12%)

Query: 10  DATYSDYTCYTGIADFVPADIESVGYRVF----LGHKQYFVSSDVGAGKMQWYAFHKEPP 65
           +  Y  +  + G+A +  +D +  G RV      G +  FV   V   K+ W+     P 
Sbjct: 96  EPKYVGHCAFRGLASY--SDGQPFGPRVNYIYGRGLRAGFVP--VSPTKVYWFICFNSPS 151

Query: 66  GGVDRPNGK--KERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDR------TPTLTWGR 117
            G    +    K++  ++ + W   +++++ +T +D +++  + DR      +P+ +   
Sbjct: 152 AGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSAS--A 209

Query: 118 GRVTLLGDSVHAMQPNMGQGGCMAIE 143
           GRV ++GD+ H M PN+GQG C A+E
Sbjct: 210 GRVVVVGDAWHPMTPNLGQGACCALE 235


>Glyma01g41430.1 
          Length = 430

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 18/150 (12%)

Query: 6   FGPKDATYSDYTCYTGIADFVPADIESVGYRVF----LGHKQYFVSSDVGAGKMQWYAFH 61
            G  +  Y  +  + G+A +  +D +  G RV      G +  FV   V   K+ W+   
Sbjct: 202 MGFPEPKYVGHCAFRGLASY--SDGQPFGPRVNYIYGRGLRAGFVP--VSPTKVYWFICF 257

Query: 62  KEPPGGVDRPNGK--KERLLKIFEGWCDNVIDLLLATDEDAILRRDIYDR------TPTL 113
             P  G    +    K++  ++ + W   +++++ +T +D +++  + DR      +P+ 
Sbjct: 258 NSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSA 317

Query: 114 TWGRGRVTLLGDSVHAMQPNMGQGGCMAIE 143
           +   GRV ++GD+ H M PN+GQG C A+E
Sbjct: 318 S--AGRVVVVGDAWHPMTPNLGQGACCALE 345