Jatropha Genome Database

JcCB0537911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0537911.10 + phase: 0 /partial
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30460.1                                                       292   1e-79
Glyma08g06790.1                                                       291   3e-79
Glyma08g19250.1                                                       238   3e-63
Glyma14g33930.1                                                       203   7e-53
Glyma08g39780.1                                                       114   3e-26
Glyma15g05750.1                                                       105   3e-23

>Glyma07g30460.1 
          Length = 458

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/166 (81%), Positives = 147/166 (88%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           VAIET+SFSKYAGFTGVRLGWTVVPK+LLFSDGFPVAKDFNRIVCTCFNGASN+ QAGGL
Sbjct: 293 VAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 352

Query: 61  ACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNVYGGVNAPYVWVHFPGRSSWDVFSE 120
           ACLSP+G  AM+ V+GFYKEN DIIM+TF+SLGF VYGG +APYVWVHFPGRSSWDVF+E
Sbjct: 353 ACLSPDGLKAMRDVIGFYKENTDIIMETFDSLGFKVYGGKDAPYVWVHFPGRSSWDVFAE 412

Query: 121 ILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQLYK 166
           ILEKTHVVTT            IRVSAFGHREN+LEACRRFKQLYK
Sbjct: 413 ILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRENVLEACRRFKQLYK 458


>Glyma08g06790.1 
          Length = 458

 Score =  291 bits (744), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 136/166 (81%), Positives = 147/166 (88%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           VAIET+SFSKYAGFTGVRLGWTVVPK+LLFSDGFPVAKDFNRIVCTCFNGASN+ QAGGL
Sbjct: 293 VAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 352

Query: 61  ACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNVYGGVNAPYVWVHFPGRSSWDVFSE 120
           ACLSPEG  AM+ V+GFYKEN +IIM+TF+SLGF VYGG +APYVWVHFPGRSSWDVF+E
Sbjct: 353 ACLSPEGLKAMRDVIGFYKENTNIIMETFDSLGFKVYGGKDAPYVWVHFPGRSSWDVFAE 412

Query: 121 ILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQLYK 166
           ILEKTHVVTT            IRVSAFGHREN+LEACRRFKQLYK
Sbjct: 413 ILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRENVLEACRRFKQLYK 458


>Glyma08g19250.1 
          Length = 449

 Score =  238 bits (606), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 109/164 (66%), Positives = 129/164 (78%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           VAIE +SFSK+AGFTGVRLGWTVVP+ELL+S+GFPV  DFNRI+CTCFNGASN+ QAGGL
Sbjct: 280 VAIEVSSFSKFAGFTGVRLGWTVVPEELLYSNGFPVVHDFNRIMCTCFNGASNIAQAGGL 339

Query: 61  ACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNVYGGVNAPYVWVHFPGRSSWDVFSE 120
           ACLSPEG  AMQ +V +Y ENA I++D   SLG  VYGG NAPYVWVHFPG  SW+VF+E
Sbjct: 340 ACLSPEGLRAMQTLVDYYMENARILVDALTSLGLTVYGGKNAPYVWVHFPGSKSWNVFAE 399

Query: 121 ILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQL 164
           ILEKTH++T             IR+SAFG R++I+EA +R K L
Sbjct: 400 ILEKTHIITVPGSGFGPGGEEYIRISAFGQRDSIIEASKRLKYL 443


>Glyma14g33930.1 
          Length = 356

 Score =  203 bits (516), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 122/164 (74%), Gaps = 4/164 (2%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           VAIE +SFSK+AGFTGVRLGWTVVP+ELL++DG+P+ KD++RIVCTCFNGASN+VQAGGL
Sbjct: 196 VAIEISSFSKFAGFTGVRLGWTVVPEELLYADGYPIIKDYDRIVCTCFNGASNIVQAGGL 255

Query: 61  ACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNVYGGVNAPYVWVHFPGRSSWDVFSE 120
           ACLSP+G    Q     +K    +++    SLG  VYGG N PYVWVHFPG  SW+VF++
Sbjct: 256 ACLSPQGFQ--QPFTTTWKMRKYLLIR--ESLGLKVYGGKNGPYVWVHFPGLRSWEVFNK 311

Query: 121 ILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQL 164
           ILE+  +VT             IRVSAFGHRE++LEA RR ++L
Sbjct: 312 ILERAAIVTVPSIEFGPGGEGYIRVSAFGHRESVLEASRRLRKL 355


>Glyma08g39780.1 
          Length = 214

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 64/75 (85%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGL 60
           V IE ++FSK+AGF GVRLGWTV P+ELL+++G+P+ KD++RIVCTCFNGASN+VQAGGL
Sbjct: 139 VTIEISTFSKFAGFIGVRLGWTVAPEELLYANGYPIIKDYDRIVCTCFNGASNIVQAGGL 198

Query: 61  ACLSPEGRNAMQKVV 75
           ACLSP G +    V+
Sbjct: 199 ACLSPPGSSCCNFVL 213


>Glyma15g05750.1 
          Length = 303

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 6/102 (5%)

Query: 1   VAIETASFSKYAGFTGVRLGWTVVPKELLFSDGFPVAKDFNRIVCTCFNGASNVVQA--- 57
           VAIE +SFSK+AGFTGVRLGWTVV +E+L+S+GFPV  DFNRI+CTCFNGASN+ QA   
Sbjct: 160 VAIEVSSFSKFAGFTGVRLGWTVVLEEILYSNGFPVVLDFNRIMCTCFNGASNITQAVPR 219

Query: 58  ---GGLACLSPEGRNAMQKVVGFYKENADIIMDTFNSLGFNV 96
                   +      AMQ +V  Y ENA I++    SL  ++
Sbjct: 220 FISKYCEIMFWRISQAMQSLVDHYMENARILVGALTSLKTHI 261