Jatropha Genome Database

JcCB0536531.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0536531.20 - phase: 0 /TE
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g05960.1                                                       104   2e-23
Glyma09g05950.1                                                       103   5e-23
Glyma11g25770.1                                                        83   8e-17
Glyma01g22250.1                                                        83   8e-17
Glyma03g21660.1                                                        83   8e-17
Glyma10g22170.1                                                        64   3e-11
Glyma01g24090.1                                                        63   5e-11
Glyma15g26820.1                                                        63   6e-11
Glyma16g14490.1                                                        62   9e-11
Glyma15g32290.1                                                        62   1e-10
Glyma09g26090.1                                                        62   1e-10

>Glyma09g05960.1 
          Length = 701

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 61/92 (66%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITGPRIAMKIVENERVRKSEEE 70
           EG S+SRPP F+G NY  WK RMK FI+ VD   W  +  GP++  K+V+NE V KSE+E
Sbjct: 7   EGHSISRPPYFDGRNYIEWKERMKIFIQSVDFKLWLLIKNGPKVPTKLVDNEEVEKSEDE 66

Query: 71  YTEADWNYISINAKAINILHCALDPSEYNKVS 102
           Y E D   + + AKA NILHCAL+P ++   S
Sbjct: 67  YDEEDMKNLELEAKAKNILHCALNPDDFEIFS 98


>Glyma09g05950.1 
          Length = 522

 Score =  103 bits (256), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/92 (51%), Positives = 60/92 (65%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITGPRIAMKIVENERVRKSEEE 70
           EG S+SRPP F+G NY  WK RMK FI+ VD   W  +  GP++  K+V+NE V KSE+E
Sbjct: 7   EGHSISRPPYFDGRNYIEWKERMKIFIQSVDFKLWLLIKNGPKVPTKLVDNEEVEKSEDE 66

Query: 71  YTEADWNYISINAKAINILHCALDPSEYNKVS 102
           Y E D   + + AKA NILHCAL+P  +   S
Sbjct: 67  YDEEDMKNLELEAKAKNILHCALNPDVFEIFS 98


>Glyma11g25770.1 
          Length = 667

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITGPRIAMKIVENERV------ 64
           EG S++RPP+FNG  Y YWKTRM+ FI+ +D+N W  +  GP I   +   ERV      
Sbjct: 10  EGNSINRPPIFNGEGYHYWKTRMQIFIEAIDLNIWEAIEIGPYIPTTV---ERVSIDGSS 66

Query: 65  -------RKSEEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
                   K  + ++E D   +  N KA NI+  AL   EY +VS CKSA
Sbjct: 67  SSESITIEKPRDRWSEEDRKRVQYNLKAKNIITSALGMGEYFRVSNCKSA 116


>Glyma01g22250.1 
          Length = 716

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITGPRIAMKIVENERV------ 64
           EG S++RPP+FNG  Y YWKTRM+ FI+ +D+N W  +  GP I   +   ERV      
Sbjct: 10  EGNSINRPPIFNGEGYHYWKTRMQIFIEAIDLNIWEAIEIGPYIPTTV---ERVSIDGSS 66

Query: 65  -------RKSEEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
                   K  + ++E D   +  N KA NI+  AL   EY +VS CKSA
Sbjct: 67  SSESITIEKPRDRWSEEDRKRVQYNLKAKNIITSALGMDEYFRVSNCKSA 116


>Glyma03g21660.1 
          Length = 715

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITGPRIAMKIVENERV------ 64
           EG S++RPP+FNG  Y YWKTRM+ FI+ +D+N W  +  GP I   +   ERV      
Sbjct: 10  EGNSINRPPIFNGEGYHYWKTRMQIFIEAIDLNIWEAIEIGPYIPTTV---ERVSIDGSS 66

Query: 65  -------RKSEEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
                   K  + ++E D   +  N KA NI+  AL   EY +VS CKSA
Sbjct: 67  SSESITIEKPRDRWSEEDRKRVQYNLKAKNIITSALGMDEYFRVSNCKSA 116


>Glyma10g22170.1 
          Length = 2027

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITG---PRIAMKIVENERVRKS 67
           EG  V+RPP+ +GSNY YWK RM  F+K +D   W+ VI G   P++     +     K 
Sbjct: 6   EGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTEELKP 65

Query: 68  EEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
           EE++T+ +      N+KA+N L   +D + +  ++ C  A
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVA 105


>Glyma01g24090.1 
          Length = 2095

 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITG---PRIAMKIVENERVRKS 67
           EG  V+RPP+ +GSNY YWK RM  F+K +D   W+ VI G   P++     +     K 
Sbjct: 6   EGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKP 65

Query: 68  EEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
           EE++T+ +      N+KA+N L   +D + +  ++ C  A
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVA 105


>Glyma15g26820.1 
          Length = 1563

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITG---PRIAMKIVENERVRKS 67
           EG  V+RPP+ +GSNY YWK RM  F+K +D   W+ VI G   P++     +     K 
Sbjct: 6   EGGPVNRPPVLDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTEELKP 65

Query: 68  EEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
           EE++T+ +      N+KA+N L   +D + +  ++ C  A
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVA 105


>Glyma16g14490.1 
          Length = 2156

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITG---PRIAMKIVENERVRKS 67
           EG  V+RPP+ +G+NY YWK RM  F+K +D   W+ VI G   P++     +     K 
Sbjct: 6   EGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKP 65

Query: 68  EEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
           EE++T+ +      N+KA+N L   +D + +  ++ C  A
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVA 105


>Glyma15g32290.1 
          Length = 2173

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITG---PRIAMKIVENERVRKS 67
           EG  V+RPP+ +G+NY YWK RM  F+K +D   W+ VI G   P++     +     K 
Sbjct: 6   EGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDGLKP 65

Query: 68  EEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
           EE++T+ +      N+KA+N L   +D + +  ++ C  A
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVA 105


>Glyma09g26090.1 
          Length = 2169

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 11  EGQSVSRPPLFNGSNYSYWKTRMKNFIKLVDINYWRNVITG---PRIAMKIVENERVRKS 67
           EG  V+RPP+ +G+NY YWK RM  F+K +D   W+ VI G   P++     +     K 
Sbjct: 6   EGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDAEGKPTDELKP 65

Query: 68  EEEYTEADWNYISINAKAINILHCALDPSEYNKVSGCKSA 107
           EE++T+ +      N+KA+N L   +D + +  ++ C  A
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVA 105