Jatropha Genome Database

JcCB0534601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0534601.10 - phase: 0 /partial
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30090.1                                                       350   6e-97
Glyma13g39210.1                                                        59   3e-09
Glyma12g31100.2                                                        59   3e-09
Glyma12g31100.1                                                        59   3e-09
Glyma08g07960.1                                                        58   5e-09
Glyma06g05770.1                                                        52   4e-07

>Glyma07g30090.1 
          Length = 408

 Score =  350 bits (898), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 161/194 (82%), Positives = 173/194 (89%)

Query: 10  AFRFGADKESLREPRVVRVGLIQNSIALPTTASFVDQKRAIFQKLKPMIDAAGSSGVNIL 69
           AF F ADKE LREPR+VRVGLIQNSI LPTTA F DQK+AIF+KLKP+I+AAGSSGVN+L
Sbjct: 74  AFSFCADKELLREPRIVRVGLIQNSIVLPTTAHFADQKKAIFEKLKPIIEAAGSSGVNVL 133

Query: 70  CLQEAWMMPFAFCTREKRWCEFAEPIDGESTQFLQEFAQKYNMVIISPILERDDNHGETL 129
           CLQEAWMMPFAFCTREKRWCEFAEP+DGEST+FLQ FA KYNMVI+SPILERD NHGE +
Sbjct: 134 CLQEAWMMPFAFCTREKRWCEFAEPVDGESTKFLQSFALKYNMVIVSPILERDINHGEVI 193

Query: 130 WNTAXXXXXXXXXXXKHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIAVNICYGRH 189
           WNTA           KHRKNHIPRVGDFNESTYYMEGNTGHPVFETA+GKIA+NICYGRH
Sbjct: 194 WNTAVVIGNHGNIIGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETAFGKIAINICYGRH 253

Query: 190 HPLNWLAFGLNGAE 203
           HPLNWLAFGLNGAE
Sbjct: 254 HPLNWLAFGLNGAE 267


>Glyma13g39210.1 
          Length = 299

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 57  MIDAAGSSGVNILCLQEAWMMPFAFCTREKR-WCEFAEPIDGESTQF-LQEFAQKYNMVI 114
           ++ AA   G NI+ +QE +   + FC  ++  + + A+P     T   +Q+ A++  +VI
Sbjct: 30  LVRAAHKQGANIILIQELFE-GYYFCQAQREEFIQRAKPHKDHPTILRMQKLAKELGVVI 88

Query: 115 ISPILERDDNHGETLWNTAXXXXXXXXXXXKHRKNHIPRVGDFNESTYYMEGNTGHPVFE 174
                E  +N     +N+             +RK+HIP    + E  Y+  G+TG  VF+
Sbjct: 89  PVSFFEEANN---AHYNSTAIIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQ 145

Query: 175 TAYGKIAVNICYGRHHPLNWLAFGLNGAE 203
           T + K+ V IC+ +  P    A  L GAE
Sbjct: 146 TKFAKVGVAICWDQWFPEAARAMVLQGAE 174


>Glyma12g31100.2 
          Length = 299

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 57  MIDAAGSSGVNILCLQEAWMMPFAFCTREK-RWCEFAEPIDGESTQF-LQEFAQKYNMVI 114
           +I AA   G NI+ +QE +   + FC  ++  + + A+P     T   +Q+ A++  +VI
Sbjct: 30  LIRAAHKQGANIILIQELFE-GYYFCQAQRVDFFQRAKPHKDHPTILRMQKLAKELGVVI 88

Query: 115 ISPILERDDNHGETLWNTAXXXXXXXXXXXKHRKNHIPRVGDFNESTYYMEGNTGHPVFE 174
                E  +N     +N+             +RK+HIP    + E  Y+  G+TG  VF+
Sbjct: 89  PVSFFEEANN---AHYNSIAIIDSDGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQ 145

Query: 175 TAYGKIAVNICYGRHHPLNWLAFGLNGAE 203
           T + KI V IC+ +  P    A  L GAE
Sbjct: 146 TKFAKIGVAICWDQWFPEAARAMVLQGAE 174


>Glyma12g31100.1 
          Length = 299

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 57  MIDAAGSSGVNILCLQEAWMMPFAFCTREK-RWCEFAEPIDGESTQF-LQEFAQKYNMVI 114
           +I AA   G NI+ +QE +   + FC  ++  + + A+P     T   +Q+ A++  +VI
Sbjct: 30  LIRAAHKQGANIILIQELFE-GYYFCQAQRVDFFQRAKPHKDHPTILRMQKLAKELGVVI 88

Query: 115 ISPILERDDNHGETLWNTAXXXXXXXXXXXKHRKNHIPRVGDFNESTYYMEGNTGHPVFE 174
                E  +N     +N+             +RK+HIP    + E  Y+  G+TG  VF+
Sbjct: 89  PVSFFEEANN---AHYNSIAIIDSDGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQ 145

Query: 175 TAYGKIAVNICYGRHHPLNWLAFGLNGAE 203
           T + KI V IC+ +  P    A  L GAE
Sbjct: 146 TKFAKIGVAICWDQWFPEAARAMVLQGAE 174


>Glyma08g07960.1 
          Length = 299

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 6/149 (4%)

Query: 57  MIDAAGSSGVNILCLQEAWMMPFAFCTREKR-WCEFAEPIDGESTQF-LQEFAQKYNMVI 114
           ++ AA   G NI+ +QE +   + FC  ++  + + A+P     T   +Q+ A++  +VI
Sbjct: 30  LVRAAHKQGANIILIQELFE-GYYFCQAQREDFIQRAKPHKDHPTILRMQKLAKELGVVI 88

Query: 115 ISPILERDDNHGETLWNTAXXXXXXXXXXXKHRKNHIPRVGDFNESTYYMEGNTGHPVFE 174
                E  +N     +N+             +RK+HIP    + E  Y+  G+TG  VF+
Sbjct: 89  PVSFFEEANN---AHYNSIAIIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQ 145

Query: 175 TAYGKIAVNICYGRHHPLNWLAFGLNGAE 203
           T   KI V IC+ +  P    A  L GAE
Sbjct: 146 TKLAKIGVAICWDQWFPEAARAMVLQGAE 174


>Glyma06g05770.1 
          Length = 352

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 25/185 (13%)

Query: 27  RVGLIQNSIALPTTASFVDQKRAIFQKLKPMIDAAGSSGVNILCLQEAWMMPFAFCTREK 86
           ++GL Q S++ P   S +   R   Q        A S G  ++ L E W  P++      
Sbjct: 74  KIGLCQLSVS-PDKDSNIAHARTAIQD-------AASKGAQLVLLPEIWNSPYS----ND 121

Query: 87  RWCEFAEPIDG---ESTQFLQEFAQKYNMVIIS-PILERDDNHGETLWNTAXXXXXXXXX 142
            +  +AE ID     ST  L E ++   + I+   I ER    G  L+NT          
Sbjct: 122 SFPVYAEDIDAGASPSTAMLSELSRLLKITIVGGSIPERS---GGLLYNTCCVFGTDGNL 178

Query: 143 XXKHRKNH-----IPRVGDFNESTYYMEGNTGHPVFETAYGKIAVNICYGRHHPLNWLAF 197
             KHRK H     IP    F ES     G T   + +T  G+I + ICY    P   + +
Sbjct: 179 LAKHRKIHLFDIDIPGKITFIESKTLTAGETP-TIVDTEVGRIGIGICYDIRFPELAMIY 237

Query: 198 GLNGA 202
              GA
Sbjct: 238 AARGA 242