Jatropha Genome Database

JcCB0498951.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0498951.10 + phase: 0 /pseudo/partial
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36530.1                                                       142   3e-34
Glyma13g27220.1                                                       141   7e-34
Glyma13g27220.3                                                       141   7e-34
Glyma13g27220.2                                                       141   8e-34
Glyma08g18800.1                                                        64   1e-10
Glyma08g10190.1                                                        62   4e-10
Glyma05g27250.1                                                        61   9e-10
Glyma01g35910.1                                                        55   6e-08

>Glyma12g36530.1 
          Length = 523

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 6/96 (6%)

Query: 5   AIVEVNPKPNKGLTSKLVDYLEKLIVKLMFDKSQPLHYLNGNFAPVPEAPPVKDLPVIGH 64
            IV+V PKP+ G TSK+VD LEKL+VK ++D S   HYL GNFAPVPE PP KDLPV G+
Sbjct: 13  GIVKVEPKPSNGFTSKVVDLLEKLVVKFLYDSSLTHHYLTGNFAPVPETPPTKDLPVKGY 72

Query: 65  LPECLNGEFVRVGPNPKFAPVAGYH*WKGNICSSLC 100
           LP+CLNGEFVRVGPNPKF+PVAGYH      CS +C
Sbjct: 73  LPDCLNGEFVRVGPNPKFSPVAGYH------CSGIC 102


>Glyma13g27220.1 
          Length = 574

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 5   AIVEVNPKPNKGLTSKLVDYLEKLIVKLMFDKSQPLHYLNGNFAPVPEAPPVKDLPVIGH 64
            +V+V PKP+ G TSK+VD LEKL+VK ++D S P HYL GNFAPV E PP KDLPV G+
Sbjct: 13  GLVKVEPKPSNGFTSKVVDLLEKLVVKFLYDSSLPHHYLTGNFAPVSETPPTKDLPVKGY 72

Query: 65  LPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           LP+CLNGEFVRVGPNPKFAPVAGYH + G+
Sbjct: 73  LPDCLNGEFVRVGPNPKFAPVAGYHWFDGD 102


>Glyma13g27220.3 
          Length = 548

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 5   AIVEVNPKPNKGLTSKLVDYLEKLIVKLMFDKSQPLHYLNGNFAPVPEAPPVKDLPVIGH 64
            +V+V PKP+ G TSK+VD LEKL+VK ++D S P HYL GNFAPV E PP KDLPV G+
Sbjct: 13  GLVKVEPKPSNGFTSKVVDLLEKLVVKFLYDSSLPHHYLTGNFAPVSETPPTKDLPVKGY 72

Query: 65  LPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           LP+CLNGEFVRVGPNPKFAPVAGYH + G+
Sbjct: 73  LPDCLNGEFVRVGPNPKFAPVAGYHWFDGD 102


>Glyma13g27220.2 
          Length = 543

 Score =  141 bits (355), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 5   AIVEVNPKPNKGLTSKLVDYLEKLIVKLMFDKSQPLHYLNGNFAPVPEAPPVKDLPVIGH 64
            +V+V PKP+ G TSK+VD LEKL+VK ++D S P HYL GNFAPV E PP KDLPV G+
Sbjct: 13  GLVKVEPKPSNGFTSKVVDLLEKLVVKFLYDSSLPHHYLTGNFAPVSETPPTKDLPVKGY 72

Query: 65  LPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           LP+CLNGEFVRVGPNPKFAPVAGYH + G+
Sbjct: 73  LPDCLNGEFVRVGPNPKFAPVAGYHWFDGD 102


>Glyma08g18800.1 
          Length = 353

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 39/58 (67%)

Query: 37  SQPLHYLNGNFAPVPEAPPVKDLPVIGHLPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           + P   + GNFAPVPE P  + LPV G +P+C+ G +VR G NP + PVAG+H + G+
Sbjct: 130 ADPRVQIAGNFAPVPEHPAHQSLPVTGKIPKCIEGVYVRNGANPLYEPVAGHHFFDGD 187


>Glyma08g10190.1 
          Length = 587

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 13  PNKGLTSKLVDYLEKLIVKLMFDK-----SQPLHYLNGNFAPVPEAPPVKDLPVIGHLPE 67
           P +   +K +D  E  ++    ++     + P   + GNFAPVPE P    LPVIG +P+
Sbjct: 85  PFQKAAAKALDMFESALLSRELNQPFPKTTDPRVQIAGNFAPVPEHPVEHSLPVIGTIPD 144

Query: 68  CLNGEFVRVGPNPKFAPVAGYH*WKGN 94
            +NG ++R G NP F P AG+H + G+
Sbjct: 145 AINGVYLRNGANPLFKPKAGHHLFDGD 171


>Glyma05g27250.1 
          Length = 552

 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 13  PNKGLTSKLVDYLEKLIVKLMFDKSQPLH-------YLNGNFAPVPEAPPVKDLPVIGHL 65
           P +   +K +D  E  +  L  + SQPL         + GNFAPVPE P    LPVIG +
Sbjct: 55  PFQKAAAKALDMFESAL--LSRELSQPLPKTTDPRVQIAGNFAPVPEHPVQHSLPVIGTI 112

Query: 66  PECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           P+ +NG ++R G NP F P AG+H + G+
Sbjct: 113 PDAVNGVYLRNGANPLFHPKAGHHLFDGD 141


>Glyma01g35910.1 
          Length = 509

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 35/57 (61%)

Query: 38 QPLHYLNGNFAPVPEAPPVKDLPVIGHLPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           P H L+ NFAPV E PP +   + G LP  L+G ++R GPNP+F P   YH + G+
Sbjct: 22 DPRHVLSQNFAPVHELPPTECEVIEGSLPPSLDGAYIRNGPNPQFLPRGPYHLFDGD 78