Jatropha Genome Database

JcCB0496181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0496181.10 - phase: 0 /pseudo
         (255 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g41120.1                                                       287   7e-78
Glyma15g04290.1                                                       286   1e-77
Glyma15g04290.2                                                       285   4e-77
Glyma19g36990.1                                                       195   4e-50
Glyma19g36990.2                                                       194   6e-50
Glyma03g34300.1                                                       194   6e-50
Glyma10g06740.1                                                       192   2e-49
Glyma13g20930.1                                                       192   4e-49
Glyma04g34480.1                                                        57   3e-08
Glyma17g23080.1                                                        56   3e-08

>Glyma13g41120.1 
          Length = 246

 Score =  287 bits (735), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 144/218 (66%), Positives = 159/218 (72%), Gaps = 43/218 (19%)

Query: 1   MARKFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLC 60
           M RKFFVGGNWKCNGTTE+VKKIV+TLNE +VP                           
Sbjct: 36  MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAKVPG-------------------------- 69

Query: 61  IVFDIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTG 120
                            +D+ EVV+SPPFVFLP VKS LRPDFHV+AQNCWV+KGGA+TG
Sbjct: 70  -----------------EDVVEVVVSPPFVFLPFVKSLLRPDFHVSAQNCWVRKGGAYTG 112

Query: 121 EVSAEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREA 180
           EVSAEMLVNL I WVI+GHSERR LL ESNEFVGDKVAYAL QGLKVIAC+GETLEQREA
Sbjct: 113 EVSAEMLVNLGIPWVIIGHSERRQLLNESNEFVGDKVAYALQQGLKVIACIGETLEQREA 172

Query: 181 GSTLEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
           G+T  VVA QTKAIAA+I NW +VVLAYEPVWAIGTG+
Sbjct: 173 GTTTAVVAEQTKAIAAKISNWDNVVLAYEPVWAIGTGK 210


>Glyma15g04290.1 
          Length = 253

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 143/218 (65%), Positives = 160/218 (73%), Gaps = 43/218 (19%)

Query: 1   MARKFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLC 60
           M RKFFVGGNWKCNGTTE+VKKIV+TLNE +VP                           
Sbjct: 1   MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAKVPG-------------------------- 34

Query: 61  IVFDIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTG 120
                            +D+ EVV+SPPFVFLP+VKS LRPDFHV+AQNCWV+KGGA+TG
Sbjct: 35  -----------------EDVVEVVVSPPFVFLPVVKSLLRPDFHVSAQNCWVRKGGAYTG 77

Query: 121 EVSAEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREA 180
           EVSAEMLVNL I WVI+GHSERR LL ESNEFVGDKVAYAL QGLKVIAC+GETLEQREA
Sbjct: 78  EVSAEMLVNLGIPWVIIGHSERRQLLNESNEFVGDKVAYALQQGLKVIACIGETLEQREA 137

Query: 181 GSTLEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
           G+T  VV+ QTKAIAA+I NW +VVLAYEPVWAIGTG+
Sbjct: 138 GTTTAVVSEQTKAIAAKISNWDNVVLAYEPVWAIGTGK 175


>Glyma15g04290.2 
          Length = 191

 Score =  285 bits (728), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 143/218 (65%), Positives = 160/218 (73%), Gaps = 43/218 (19%)

Query: 1   MARKFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLC 60
           M RKFFVGGNWKCNGTTE+VKKIV+TLNE +VP                           
Sbjct: 1   MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAKVPG-------------------------- 34

Query: 61  IVFDIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTG 120
                            +D+ EVV+SPPFVFLP+VKS LRPDFHV+AQNCWV+KGGA+TG
Sbjct: 35  -----------------EDVVEVVVSPPFVFLPVVKSLLRPDFHVSAQNCWVRKGGAYTG 77

Query: 121 EVSAEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREA 180
           EVSAEMLVNL I WVI+GHSERR LL ESNEFVGDKVAYAL QGLKVIAC+GETLEQREA
Sbjct: 78  EVSAEMLVNLGIPWVIIGHSERRQLLNESNEFVGDKVAYALQQGLKVIACIGETLEQREA 137

Query: 181 GSTLEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
           G+T  VV+ QTKAIAA+I NW +VVLAYEPVWAIGTG+
Sbjct: 138 GTTTAVVSEQTKAIAAKISNWDNVVLAYEPVWAIGTGK 175


>Glyma19g36990.1 
          Length = 309

 Score =  195 bits (495), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 131/215 (60%), Gaps = 45/215 (20%)

Query: 4   KFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLCIVF 63
           KFFVGGNWKCNGT + + K+V+ LN  ++   DV                          
Sbjct: 59  KFFVGGNWKCNGTKDSISKLVADLNSAKL-EPDV-------------------------- 91

Query: 64  DIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEVS 123
                             +VV++PPF+++  VK+SL     ++AQN WV KGGAFTGE+S
Sbjct: 92  ------------------DVVVAPPFLYIDQVKNSLTERIEISAQNSWVGKGGAFTGEIS 133

Query: 124 AEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREAGST 183
           AE L +L   WV+LGHSERR ++ E++EF+G K AYALSQGL VIAC+GE LE+REAG T
Sbjct: 134 AEQLKDLGCKWVVLGHSERRHIIGENDEFIGKKAAYALSQGLGVIACIGELLEEREAGKT 193

Query: 184 LEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
            +V   Q KA A  + +W ++V+AYEPVWAIGTG+
Sbjct: 194 FDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGK 228


>Glyma19g36990.2 
          Length = 306

 Score =  194 bits (494), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 131/215 (60%), Gaps = 45/215 (20%)

Query: 4   KFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLCIVF 63
           KFFVGGNWKCNGT + + K+V+ LN  ++   DV                          
Sbjct: 59  KFFVGGNWKCNGTKDSISKLVADLNSAKL-EPDV-------------------------- 91

Query: 64  DIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEVS 123
                             +VV++PPF+++  VK+SL     ++AQN WV KGGAFTGE+S
Sbjct: 92  ------------------DVVVAPPFLYIDQVKNSLTERIEISAQNSWVGKGGAFTGEIS 133

Query: 124 AEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREAGST 183
           AE L +L   WV+LGHSERR ++ E++EF+G K AYALSQGL VIAC+GE LE+REAG T
Sbjct: 134 AEQLKDLGCKWVVLGHSERRHIIGENDEFIGKKAAYALSQGLGVIACIGELLEEREAGKT 193

Query: 184 LEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
            +V   Q KA A  + +W ++V+AYEPVWAIGTG+
Sbjct: 194 FDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGK 228


>Glyma03g34300.1 
          Length = 309

 Score =  194 bits (494), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 131/215 (60%), Gaps = 45/215 (20%)

Query: 4   KFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLCIVF 63
           KFFVGGNWKCNGT + + K+V+ LN  ++   DV                          
Sbjct: 59  KFFVGGNWKCNGTKDSISKLVADLNNAKL-EPDV-------------------------- 91

Query: 64  DIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEVS 123
                             +VV++PPF+++  VK+SL     ++AQN WV KGGAFTGE+S
Sbjct: 92  ------------------DVVVAPPFLYIDQVKNSLTERIEISAQNSWVGKGGAFTGEIS 133

Query: 124 AEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREAGST 183
           AE L +L   WV+LGHSERR ++ E++EF+G K AYALSQGL VIAC+GE LE+REAG T
Sbjct: 134 AEQLKDLGCKWVVLGHSERRHVIGENDEFIGKKAAYALSQGLGVIACIGELLEEREAGKT 193

Query: 184 LEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
            +V   Q KA A  + +W ++V+AYEPVWAIGTG+
Sbjct: 194 FDVCFQQLKAYADAVASWDNIVIAYEPVWAIGTGK 228


>Glyma10g06740.1 
          Length = 304

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 130/215 (60%), Gaps = 45/215 (20%)

Query: 4   KFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLCIVF 63
           KFFVGGNWKCNGT + ++K+VS LN   +  SDV                          
Sbjct: 54  KFFVGGNWKCNGTKDSIRKLVSDLNSATL-ESDV-------------------------- 86

Query: 64  DIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEVS 123
                             +VV++PPFV++  VK+S+     ++AQN WV KGGAFTGE+S
Sbjct: 87  ------------------DVVVAPPFVYIDQVKNSITDRIEISAQNSWVGKGGAFTGEIS 128

Query: 124 AEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREAGST 183
            E L +L   WVILGHSERR ++ E++EF+G K  YALS+GL VIAC+GE L++REAG T
Sbjct: 129 VEQLKDLGCKWVILGHSERRHVIGENDEFIGKKAVYALSEGLGVIACIGELLQEREAGKT 188

Query: 184 LEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
            +V   Q KA A  + +W ++V+AYEPVWAIGTG+
Sbjct: 189 FDVCFQQLKAFADVVPSWDNIVIAYEPVWAIGTGK 223


>Glyma13g20930.1 
          Length = 305

 Score =  192 bits (487), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 128/215 (59%), Gaps = 45/215 (20%)

Query: 4   KFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLCIVF 63
           KFFVGGNWKCNGT + + K+VS LN                                   
Sbjct: 55  KFFVGGNWKCNGTKDSISKLVSDLNSA--------------------------------- 81

Query: 64  DIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEVS 123
                        L+   +VV++PPFV++  VK+S+     ++AQN WV KGGAFTGE+S
Sbjct: 82  ------------TLEPDVDVVVAPPFVYIDQVKNSITDRIEISAQNSWVGKGGAFTGEIS 129

Query: 124 AEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREAGST 183
            E L +L   WVILGHSERR ++ E++EF+G K AYALS+GL VIAC+GE L++REAG T
Sbjct: 130 VEQLKDLGCKWVILGHSERRHVIGENDEFIGKKTAYALSEGLGVIACIGELLQEREAGQT 189

Query: 184 LEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
            ++   Q KA A  + +W ++V+AYEPVWAIGTG+
Sbjct: 190 FDICFQQLKAFADAVPSWDNIVIAYEPVWAIGTGK 224


>Glyma04g34480.1 
          Length = 175

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%)

Query: 75  LNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEV 122
            +L D  +VV++PPFV++  VK+S+      +AQN WV KGGAFTGE+
Sbjct: 34  FSLSDFTDVVVAPPFVYIDQVKNSISDRIETSAQNSWVGKGGAFTGEI 81


>Glyma17g23080.1 
          Length = 146

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 7/82 (8%)

Query: 45  ISVSALCFASVNVLLCIVFDIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFH 104
           I+    CF+S+N++  I        VN+  L      +VV++PPFV++  VK+S+     
Sbjct: 16  INFKCRCFSSLNLMYMIN-------VNSYSLCFVIYTDVVVAPPFVYIDQVKNSISDRIE 68

Query: 105 VAAQNCWVKKGGAFTGEVSAEM 126
           ++AQN WV K GAFTGE+  ++
Sbjct: 69  ISAQNSWVGKDGAFTGEIRRDL 90