Jatropha Genome Database

JcCB0495181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0495181.10 - phase: 0 
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38720.1                                                       194   4e-50
Glyma10g43990.1                                                       192   1e-49
Glyma03g03200.1                                                       184   4e-47
Glyma11g12620.1                                                        62   3e-10
Glyma19g29950.1                                                        59   4e-09

>Glyma20g38720.1 
          Length = 740

 Score =  194 bits (493), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 98/144 (68%), Positives = 104/144 (72%), Gaps = 7/144 (4%)

Query: 27  SDHHRLSLSTPSLPAFSGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVVETVDATT 86
           S   R+SLS    P+FSGLK                             A+ VET+D TT
Sbjct: 23  SSSDRVSLS---FPSFSGLKSHSPCKAAATSSRRRGACASTSVVR----AAAVETLDQTT 75

Query: 87  ETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDR 146
           E SLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVM+YNPKNP WFNRDR
Sbjct: 76  EVSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPTWFNRDR 135

Query: 147 FVLSAGHGCMLQYALLHLAGYDSV 170
           F+LSAGHGCMLQYALLHLAGYDSV
Sbjct: 136 FILSAGHGCMLQYALLHLAGYDSV 159


>Glyma10g43990.1 
          Length = 742

 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 86/96 (89%), Positives = 92/96 (95%)

Query: 76  ASVVETVDATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYN 135
           A+ VET+D TTE SLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDE+M+YN
Sbjct: 67  AAAVETLDQTTEVSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYN 126

Query: 136 PKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 171
           PKNP WFNRDRFVLSAGHGCMLQYALLHLAGYD+V+
Sbjct: 127 PKNPAWFNRDRFVLSAGHGCMLQYALLHLAGYDTVQ 162


>Glyma03g03200.1 
          Length = 731

 Score =  184 bits (468), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 92/97 (94%), Gaps = 1/97 (1%)

Query: 76  ASVVETVD-ATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKY 134
           A+ V+TV+ AT + +LVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGH+LYDE MKY
Sbjct: 55  AASVKTVEKATADAALVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDETMKY 114

Query: 135 NPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 171
           NPKNP+WFNRDRFVLSAGHGCMLQYALLHLAG+DSVK
Sbjct: 115 NPKNPFWFNRDRFVLSAGHGCMLQYALLHLAGFDSVK 151


>Glyma11g12620.1 
          Length = 338

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 3/43 (6%)

Query: 101 LAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFN 143
           ++ D VE+ANSG   L MGCA MGHILY+EVM YNPKNP  FN
Sbjct: 66  ISTDVVERANSG---LSMGCATMGHILYNEVMSYNPKNPTCFN 105


>Glyma19g29950.1 
          Length = 424

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 2/48 (4%)

Query: 123 MGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV 170
           M HILYDEVM Y   NP  FN   F+LS  H CMLQ+ LLHLA  D+V
Sbjct: 1   MDHILYDEVMNYYSNNPTCFNH--FILSTRHVCMLQFILLHLASCDNV 46