Jatropha Genome Database

JcCB0492781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0492781.10 - phase: 0 /partial
         (200 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16870.1                                                       344   3e-95
Glyma15g16870.2                                                       344   4e-95
Glyma09g05600.2                                                       343   8e-95
Glyma09g05600.1                                                       342   1e-94
Glyma09g05600.3                                                       221   4e-58
Glyma09g05600.4                                                        69   2e-12
Glyma20g34790.1                                                        69   4e-12
Glyma10g32850.1                                                        68   6e-12
Glyma10g32850.2                                                        68   8e-12

>Glyma15g16870.1 
          Length = 483

 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 160/197 (81%), Positives = 185/197 (93%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           ++V V+GSQGHAGTVPMS+RQDPMAAAAE IV+LESLCKHP+++LSYDG+C+DS V+SLS
Sbjct: 265 LKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLS 324

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
           SSLVCTVGEISTWPSASNVIPGQVT+TVD+RA+DD+GREAV+Y+LS QIY ICD+RSVSC
Sbjct: 325 SSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSC 384

Query: 121 IIERKHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLTKV 180
           IIE KHDA AVICDS+LS QLKSAA +ALK+M G+IQDEVP LMSGAGHDAMA+SHLTKV
Sbjct: 385 IIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKV 444

Query: 181 GMLFVRCRGGVSHSPAD 197
           GMLFVRCRGG+SHSP +
Sbjct: 445 GMLFVRCRGGISHSPQE 461


>Glyma15g16870.2 
          Length = 403

 Score =  344 bits (882), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 160/197 (81%), Positives = 185/197 (93%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           ++V V+GSQGHAGTVPMS+RQDPMAAAAE IV+LESLCKHP+++LSYDG+C+DS V+SLS
Sbjct: 185 LKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLS 244

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
           SSLVCTVGEISTWPSASNVIPGQVT+TVD+RA+DD+GREAV+Y+LS QIY ICD+RSVSC
Sbjct: 245 SSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSC 304

Query: 121 IIERKHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLTKV 180
           IIE KHDA AVICDS+LS QLKSAA +ALK+M G+IQDEVP LMSGAGHDAMA+SHLTKV
Sbjct: 305 IIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKV 364

Query: 181 GMLFVRCRGGVSHSPAD 197
           GMLFVRCRGG+SHSP +
Sbjct: 365 GMLFVRCRGGISHSPQE 381


>Glyma09g05600.2 
          Length = 403

 Score =  343 bits (880), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 159/197 (80%), Positives = 185/197 (93%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           ++V V+GSQGHAGTVPMS+RQDPMAAAAE IV+LESLCKHP+++LSYDG+C+DS V+SLS
Sbjct: 185 LKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLS 244

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
           +SLVCTVGEISTWPSASNVIPGQVT+TVD+RA+DD+GREAV+Y+LS QIY ICD+RSVSC
Sbjct: 245 TSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSC 304

Query: 121 IIERKHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLTKV 180
           IIE KHDA AVICDS+LS QLKSAA +ALK+M G+IQDEVP LMSGAGHDAMA+SHLTKV
Sbjct: 305 IIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKV 364

Query: 181 GMLFVRCRGGVSHSPAD 197
           GMLFVRCRGG+SHSP +
Sbjct: 365 GMLFVRCRGGISHSPQE 381


>Glyma09g05600.1 
          Length = 483

 Score =  342 bits (878), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 159/197 (80%), Positives = 185/197 (93%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           ++V V+GSQGHAGTVPMS+RQDPMAAAAE IV+LESLCKHP+++LSYDG+C+DS V+SLS
Sbjct: 265 LKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLS 324

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
           +SLVCTVGEISTWPSASNVIPGQVT+TVD+RA+DD+GREAV+Y+LS QIY ICD+RSVSC
Sbjct: 325 TSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSC 384

Query: 121 IIERKHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLTKV 180
           IIE KHDA AVICDS+LS QLKSAA +ALK+M G+IQDEVP LMSGAGHDAMA+SHLTKV
Sbjct: 385 IIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKV 444

Query: 181 GMLFVRCRGGVSHSPAD 197
           GMLFVRCRGG+SHSP +
Sbjct: 445 GMLFVRCRGGISHSPQE 461


>Glyma09g05600.3 
          Length = 391

 Score =  221 bits (563), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 100/125 (80%), Positives = 119/125 (95%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           ++V V+GSQGHAGTVPMS+RQDPMAAAAE IV+LESLCKHP+++LSYDG+C+DS V+SLS
Sbjct: 265 LKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLS 324

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
           +SLVCTVGEISTWPSASNVIPGQVT+TVD+RA+DD+GREAV+Y+LS QIY ICD+RSVSC
Sbjct: 325 TSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSC 384

Query: 121 IIERK 125
           IIE K
Sbjct: 385 IIEHK 389


>Glyma09g05600.4 
          Length = 311

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 6/53 (11%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCND 53
           ++V V+GSQGHAGTVPMS+RQDPMAAAAE IV+LESLC        Y GY ++
Sbjct: 265 LKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLC------YIYRGYTSN 311


>Glyma20g34790.1 
          Length = 371

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 24/199 (12%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           + V  +G+ GHAG V M  R D   AA+EL + +E   +H              +++S S
Sbjct: 175 LTVEFEGNGGHAGAVLMPNRNDAGLAASELALAVE---RH--------------VLDSGS 217

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
              V TVG +   P A N IP +    +D R +D+  R  V+ ++      I   R V  
Sbjct: 218 IDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEERRNKVVEKIHQSAIKITKTRGV-- 275

Query: 121 IIERKHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLTKV 180
               K     VI     +L    A   A++  T E+     +++S A HD++ M+ L+ +
Sbjct: 276 ----KLSDFHVINQDPPALS-DEAIIKAVETATKELNLTSKLMISRAYHDSLFMARLSPM 330

Query: 181 GMLFVRCRGGVSHSPADMC 199
           GM+F+ C  G SH P +  
Sbjct: 331 GMIFIPCYKGYSHKPEEFA 349


>Glyma10g32850.1 
          Length = 464

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 28/201 (13%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           + V  +G+ GHAG   M  R D   AA+EL + +E   +H              +++S S
Sbjct: 268 LTVEFEGNGGHAGAALMPNRNDAGLAASELALAVE---RH--------------VLDSGS 310

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
              V TVG +   P A N IP +    +D R +D+  R  V+ ++      I   R V  
Sbjct: 311 IDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEERRNKVVEKIHQSAIKITKTRGVKL 370

Query: 121 IIER--KHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLT 178
              R    D  A I D         A   A++  T E+     +++S A HD++ M+ L+
Sbjct: 371 SDFRVINQDPPA-ISDE--------AVIKAVETATKELNLTSKLMISRAYHDSLFMARLS 421

Query: 179 KVGMLFVRCRGGVSHSPADMC 199
            +GM+F+ C  G SH P +  
Sbjct: 422 PMGMIFIPCYKGYSHKPEEFA 442


>Glyma10g32850.2 
          Length = 371

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 28/201 (13%)

Query: 1   MQVMVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKHPKDFLSYDGYCNDSIVESLS 60
           + V  +G+ GHAG   M  R D   AA+EL + +E   +H              +++S S
Sbjct: 175 LTVEFEGNGGHAGAALMPNRNDAGLAASELALAVE---RH--------------VLDSGS 217

Query: 61  SSLVCTVGEISTWPSASNVIPGQVTFTVDLRAMDDMGREAVLYELSNQIYHICDRRSVSC 120
              V TVG +   P A N IP +    +D R +D+  R  V+ ++      I   R V  
Sbjct: 218 IDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEERRNKVVEKIHQSAIKITKTRGVKL 277

Query: 121 IIER--KHDAKAVICDSELSLQLKSAANAALKRMTGEIQDEVPVLMSGAGHDAMAMSHLT 178
              R    D  A I D         A   A++  T E+     +++S A HD++ M+ L+
Sbjct: 278 SDFRVINQDPPA-ISDE--------AVIKAVETATKELNLTSKLMISRAYHDSLFMARLS 328

Query: 179 KVGMLFVRCRGGVSHSPADMC 199
            +GM+F+ C  G SH P +  
Sbjct: 329 PMGMIFIPCYKGYSHKPEEFA 349