Jatropha Genome Database

JcCB0489751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0489751.10 + phase: 2 /partial
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08230.1                                                       124   8e-29
Glyma02g36440.1                                                        84   1e-16
Glyma09g34830.1                                                        73   4e-13
Glyma04g14770.1                                                        72   4e-13
Glyma06g21190.1                                                        69   5e-12
Glyma04g32990.1                                                        60   3e-09

>Glyma17g08230.1 
          Length = 1132

 Score =  124 bits (312), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/88 (77%), Positives = 77/88 (87%), Gaps = 3/88 (3%)

Query: 175 KGR-LSRTISSRSNQTKKLKPLHWLKLTRAVQGSLWAEAQKSGEASKAPEIDLSELENLF 233
           KGR LSRTI+S++N TKKLKPLHWLKL+RAVQGSLWAE QKSGEASKAPEIDLSELENLF
Sbjct: 691 KGRILSRTINSKNN-TKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDLSELENLF 749

Query: 234 SASVPNSDHGRKSRIHSSRGRKAEKVQL 261
           SA+VP S   +KS + SS G K++KVQL
Sbjct: 750 SAAVP-SGPAKKSNVQSSAGPKSDKVQL 776


>Glyma02g36440.1 
          Length = 1138

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 60/90 (66%), Gaps = 7/90 (7%)

Query: 178 LSRTISSRSNQTKKLKPLHWLKLTRAVQGSLWAEAQKSGEASKAPEIDLSE------LEN 231
           LS ++S + ++   LKPLHWLKL+RAVQGSLWAE QKSGE S  P I L        +  
Sbjct: 714 LSLSVSVQRDEFYHLKPLHWLKLSRAVQGSLWAETQKSGEVSNHPSIILVSYTPPFIILI 773

Query: 232 LFSASVPNSDHGRKSRIHSSRGRKAEKVQL 261
           LFSA+VP S   +KS + SS G K++KVQL
Sbjct: 774 LFSAAVP-SGPAKKSNVQSSAGPKSDKVQL 802


>Glyma09g34830.1 
          Length = 1211

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 5/73 (6%)

Query: 192 LKPLHWLKLTRAVQGSLWAEAQKSGEASKAPEIDLSELENLFSASVPNSDHGRKSRIHSS 251
           LKPLHW+K+ RA +GSLWA++QK    ++APEID+SELE+LFSA+  ++  G  ++    
Sbjct: 791 LKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAA--STSDGSSTKGGGR 848

Query: 252 RG---RKAEKVQL 261
           RG    K EKVQL
Sbjct: 849 RGPNINKPEKVQL 861


>Glyma04g14770.1 
          Length = 1179

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 5/73 (6%)

Query: 192 LKPLHWLKLTRAVQGSLWAEAQKSGEASKAPEIDLSELENLFSASVPNSDHGRKSRIHSS 251
           LKPLHW+K+ RA +GSLWA++QK    ++APEID+SELE+LFSA+  ++  G  ++    
Sbjct: 776 LKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAA--STSDGSSTKGGGR 833

Query: 252 RG---RKAEKVQL 261
           RG    K EKVQL
Sbjct: 834 RGPNINKPEKVQL 846


>Glyma06g21190.1 
          Length = 1075

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)

Query: 192 LKPLHWLKLTRAVQGSLWAEAQKSGEASKAPEIDLSELENLFSASVP---NSDHGRKSRI 248
           LKPLHW K+TRA+QGSLW E Q+ G+     E D+SE+E LFSA+VP   +SD G+    
Sbjct: 767 LKPLHWSKVTRALQGSLWDELQRRGDPQITQEFDVSEIEKLFSANVPKPADSD-GKSGGR 825

Query: 249 HSSRGRKAEKVQL 261
             S G K +K+ L
Sbjct: 826 RKSVGSKTDKIHL 838


>Glyma04g32990.1 
          Length = 1148

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 16/85 (18%)

Query: 192 LKPLHWLKLTRAVQGSLWAEAQKSGE------------ASKAPEIDLSELENLFSASVP- 238
           LKPLHW K+TRA+QGSLW E Q+ G+                 E D+SE+E LFSA+VP 
Sbjct: 727 LKPLHWSKVTRALQGSLWDELQRRGDPLIIHFTGCFQSFMLTQEFDVSEIEKLFSANVPK 786

Query: 239 --NSDHGRKSRIHSSRGRKAEKVQL 261
             +SD G+      S G K +K+ L
Sbjct: 787 PADSD-GKSGGRRKSVGSKTDKIHL 810