Jatropha Genome Database

JcCB0487041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0487041.10 - phase: 0 /pseudo
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03490.1                                                       102   1e-22
Glyma05g36150.2                                                       101   2e-22
Glyma05g36150.1                                                       101   2e-22

>Glyma08g03490.1 
          Length = 193

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 69/110 (62%), Gaps = 5/110 (4%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKL+R  R   ++                    +EQEELVRSLER+QA+QS  WRRVFA
Sbjct: 1   MKKLSRKLRNEEDKNLSLPVHDGDSRPLDP----QEQEELVRSLERSQAQQSRLWRRVFA 56

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
              F Y VF +YSI   A+SPWELRY AYFME++ SWM+ISA  + +LAC
Sbjct: 57  ALFFCYIVFLMYSIVNQASSPWELRYHAYFMEEIYSWMIISADWVAVLAC 106


>Glyma05g36150.2 
          Length = 193

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 68/110 (61%), Gaps = 5/110 (4%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKLAR      +E                    +EQEELVRSLER+QA+QS  WR VFA
Sbjct: 1   MKKLARKLHNEEDENLSLPVHDGDSRPLDP----QEQEELVRSLERSQAQQSRLWRTVFA 56

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
              F Y VF LYSI+Q A+SPWELRY AYFME++ SWM+I A  + +LAC
Sbjct: 57  ALFFCYIVFLLYSIFQQASSPWELRYHAYFMEEIYSWMIIFADWVAVLAC 106


>Glyma05g36150.1 
          Length = 193

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 68/110 (61%), Gaps = 5/110 (4%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKLAR      +E                    +EQEELVRSLER+QA+QS  WR VFA
Sbjct: 1   MKKLARKLHNEEDENLSLPVHDGDSRPLDP----QEQEELVRSLERSQAQQSRLWRTVFA 56

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
              F Y VF LYSI+Q A+SPWELRY AYFME++ SWM+I A  + +LAC
Sbjct: 57  ALFFCYIVFLLYSIFQQASSPWELRYHAYFMEEIYSWMIIFADWVAVLAC 106