Jatropha Genome Database

JcCB0477181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0477181.10 + phase: 0 /partial
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g27700.1                                                       207   1e-54
Glyma08g10680.1                                                       207   2e-54
Glyma05g06540.1                                                       137   2e-33
Glyma19g22680.1                                                       137   3e-33
Glyma05g34920.1                                                        84   2e-17
Glyma08g04790.1                                                        50   7e-07

>Glyma05g27700.1 
          Length = 463

 Score =  207 bits (528), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 113/126 (89%)

Query: 1   NEKITDDILLQLTNRAQGNLQCLSLIECPRITDDGLKHVLENNPRLTKLSVPGCTRLSIE 60
           NE+ITDD+L QLTNRAQG+LQCLSL+EC RITDDGLK VL++NP+LTKLSVPGCTRLSIE
Sbjct: 239 NERITDDVLFQLTNRAQGHLQCLSLVECTRITDDGLKRVLQSNPKLTKLSVPGCTRLSIE 298

Query: 61  GIVTSLKAFRSMGTQGVKHLRIGGLYGVTQKHFEELKFLLGSDNHMQQNTYKPHYYHRGN 120
           GIV  LKA+ SMGTQG+KHL IGGLYGVTQKHFEEL FLLG+D  + Q+++KPHYY RGN
Sbjct: 299 GIVGILKAYNSMGTQGLKHLHIGGLYGVTQKHFEELSFLLGADGPLLQHSHKPHYYCRGN 358

Query: 121 FYLSCE 126
            YLSC+
Sbjct: 359 LYLSCD 364


>Glyma08g10680.1 
          Length = 451

 Score =  207 bits (527), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 113/126 (89%)

Query: 1   NEKITDDILLQLTNRAQGNLQCLSLIECPRITDDGLKHVLENNPRLTKLSVPGCTRLSIE 60
           NE+ITDD+LLQLTNRAQG+LQCLSL+EC RITDDGLK +LE NP+LTKLSVPGCTRLSIE
Sbjct: 227 NERITDDVLLQLTNRAQGHLQCLSLVECTRITDDGLKRILEGNPKLTKLSVPGCTRLSIE 286

Query: 61  GIVTSLKAFRSMGTQGVKHLRIGGLYGVTQKHFEELKFLLGSDNHMQQNTYKPHYYHRGN 120
           GIVT LKA+ SM TQGVKHL IGGLYGVTQKHFEEL+FLLG+D+ +  +++K HYY RGN
Sbjct: 287 GIVTILKAYNSMDTQGVKHLHIGGLYGVTQKHFEELRFLLGADSPLLPHSHKSHYYRRGN 346

Query: 121 FYLSCE 126
            YLSC+
Sbjct: 347 LYLSCD 352


>Glyma05g06540.1 
          Length = 439

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 89/119 (74%), Gaps = 3/119 (2%)

Query: 1   NEKITDDILLQLTNRAQGNLQCLSLIECPRITDDGLKHVLENNPRLTKLSVPGCTRLSIE 60
           NE+ITDD L++LTNRAQG LQ L+L+ C  ITD GL+ VL++NPRLTKLSVP C RL+IE
Sbjct: 207 NERITDDTLVKLTNRAQGTLQHLALVNCLWITDSGLRRVLQSNPRLTKLSVPDCIRLTIE 266

Query: 61  GIVTSLKAFRSMGTQGVKHLRIGGLYG---VTQKHFEELKFLLGSDNHMQQNTYKPHYY 116
           GI+  L+A +S G  G+KHLRIGGL G   VT + F+ELK LL +  ++QQ   KP ++
Sbjct: 267 GILFHLRALKSSGKLGIKHLRIGGLAGVCHVTDQQFDELKELLDASKYLQQGDQKPQFF 325


>Glyma19g22680.1 
          Length = 415

 Score =  137 bits (345), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 95/130 (73%), Gaps = 6/130 (4%)

Query: 1   NEKITDDILLQLTNRAQGNLQCLSLIECPRITDDGLKHVLENNPRLTKLSVPGCTRLSIE 60
           NE+ITDD L++LTNRAQG LQ L+L+ C  ITD GL  VL++NPRL KLSVP C RL+IE
Sbjct: 183 NERITDDSLVKLTNRAQGTLQHLALVNCLWITDSGLGRVLQSNPRLMKLSVPDCIRLTIE 242

Query: 61  GIVTSLKAFRSMGTQGVKHLRIGGLYG---VTQKHFEELKFLLGSDNHMQQNTYKPHYYH 117
           GI+ +L+A +S G  G+KHLRIGGL G   VT + FEELK LL +  ++QQ   KP +Y 
Sbjct: 243 GILFNLRALKSSGKLGIKHLRIGGLAGVCHVTDQQFEELKELLDASKYLQQQDQKPQFY- 301

Query: 118 RGNF-YLSCE 126
            G + +++CE
Sbjct: 302 -GEYSHITCE 310


>Glyma05g34920.1 
          Length = 316

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 3   KITDDILLQLTNRAQGNLQCLSLIECPRITDDGLKHVLENNPRLTKLSVPGCTRLSIEGI 62
           ++ D+IL+++T++A G L+ L+LI C  +TD GL+ V++ NP + KL +P CT ++ EG+
Sbjct: 69  RLNDEILIKITSKANGRLKTLALINCMHVTDHGLQRVVQQNPLINKLHIPACTGITPEGV 128

Query: 63  VTSLKAFRSMGTQGVKHLRIGGLYGVTQKHFEELKFLLGSDNHM--QQNTYKPHYYH-RG 119
           + ++K      +  +K L I G+Y + ++H + L   LG +  +  QQ   +P YYH R 
Sbjct: 129 LGAVKTL-CQRSNCLKTLSINGIYNIQKEHLDMLIMNLGKNQPLEEQQKQQQPVYYHERC 187

Query: 120 NF 121
           +F
Sbjct: 188 SF 189


>Glyma08g04790.1 
          Length = 273

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 36/46 (78%)

Query: 3   KITDDILLQLTNRAQGNLQCLSLIECPRITDDGLKHVLENNPRLTK 48
           ++ DDIL+++T++A G+L+ L+LI C  +TD+GL+ V++ NP + K
Sbjct: 71  RLNDDILIKITSKANGSLKTLALINCMHVTDEGLQRVVQQNPLINK 116