Jatropha Genome Database

JcCB0477071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0477071.10 + phase: 1 /partial
         (231 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g06440.1                                                       261   4e-70
Glyma06g06480.1                                                       261   4e-70
Glyma09g07570.1                                                        88   7e-18
Glyma15g18790.1                                                        86   2e-17
Glyma07g14980.1                                                        64   1e-10
Glyma01g00980.1                                                        63   2e-10

>Glyma04g06440.1 
          Length = 1086

 Score =  261 bits (668), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 138/232 (59%), Positives = 164/232 (70%), Gaps = 8/232 (3%)

Query: 7   DSRF---STQGRLEMLDTH-GENCGLVKNLAITGLVSTEIL---EPLIDILFDCGMDKLV 59
           D+R+   S  G++  L T  GENCGLVKNL++TGLVST++    E ++  L DCGM +LV
Sbjct: 409 DARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTDVTDVTESILLKLVDCGMQELV 468

Query: 60  DDTHTKLDEKYKVFLNGEWVGVCEDSNLFVAEXXXXXXXXXXXXQVEIKRDEQQKEVRIF 119
           DDT T L    KV LNG+WVGVC DS+ FVAE            QVEIKRD+ Q EVRI+
Sbjct: 469 DDTSTHLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRIY 528

Query: 120 ADAGRILRPLLVVENLHKIKAFKGGNYTFQSLLDKXXXXXXXXXXXXDCSTAWGIKFLVA 179
           +DAGRILRPLLVV NL KIK FK   Y+FQSLLDK            DC TAWG+++L  
Sbjct: 529 SDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLF- 587

Query: 180 GVDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 231
           G + K+ +KYTHCELDMSFLLGLSC ++PFANHDHARRVLYQ+QKHS QAIG
Sbjct: 588 GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 639


>Glyma06g06480.1 
          Length = 1124

 Score =  261 bits (668), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/232 (59%), Positives = 165/232 (71%), Gaps = 8/232 (3%)

Query: 7   DSRF---STQGRLEMLDTH-GENCGLVKNLAITGLVSTEIL---EPLIDILFDCGMDKLV 59
           D+R+   S  G++  L T  GENCGLVKNLA+TGLVST++    E ++  L DCGM++LV
Sbjct: 444 DARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTDVSAVSEYILPKLLDCGMEELV 503

Query: 60  DDTHTKLDEKYKVFLNGEWVGVCEDSNLFVAEXXXXXXXXXXXXQVEIKRDEQQKEVRIF 119
           DDT T L  K KV LNG+WVGVC DS+ FVAE            QVEIKRD+ Q EVRI+
Sbjct: 504 DDTSTHLGNKDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRIY 563

Query: 120 ADAGRILRPLLVVENLHKIKAFKGGNYTFQSLLDKXXXXXXXXXXXXDCSTAWGIKFLVA 179
           +DAGRILRPLLVV NL KIK FK    +FQSLLDK            DC TAWG+++L  
Sbjct: 564 SDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLF- 622

Query: 180 GVDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 231
           G + K+ +KYTHCELDMSFLLGLSC ++PFANHDHARRVLYQ+QKHS QAIG
Sbjct: 623 GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 674


>Glyma09g07570.1 
          Length = 1192

 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 21/226 (9%)

Query: 23  GENCGLVKNLAITGLVST-EILEPLIDILFDCGMDKLVDDTHTKLDEKYKVFLNGEWVGV 81
           G+ CGLVKNLA+   ++      P+++ L + G +   + +   + +  K+F+NG W+G+
Sbjct: 523 GQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGI 582

Query: 82  CEDSNLFVAEXXXXXXXXXXXXQVEIKRDEQQKEVRIFADAGRILRPLLVVE-------- 133
             D ++ V              +V + RD + KE+RI+ D GR  RPL +V+        
Sbjct: 583 HRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKK 642

Query: 134 -NLHKIKAFK----GGNYTFQSLLDKXXXXXXXXXXXXDCSTAWGIKFLV-AGVDKKQPL 187
            ++H ++  +    GG   +  L+ K                +  I  LV A ++ +   
Sbjct: 643 KDIHALQQRESPEDGG---WHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAY 699

Query: 188 K--YTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 231
              YTHCE+  S +LG+   IIPF +H+ + R  YQ+    +QA+G
Sbjct: 700 SDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQS-AMGKQAMG 744


>Glyma15g18790.1 
          Length = 1193

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 21/226 (9%)

Query: 23  GENCGLVKNLAITGLVST-EILEPLIDILFDCGMDKLVDDTHTKLDEKYKVFLNGEWVGV 81
           G+ CGLVKNLA+   ++      P+++ L + G +   + +   + +  K+F+NG W+G+
Sbjct: 523 GQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGI 582

Query: 82  CEDSNLFVAEXXXXXXXXXXXXQVEIKRDEQQKEVRIFADAGRILRPLLVVE-------- 133
             D ++ V              +V + RD   KE+RI+ D GR  RPL +V+        
Sbjct: 583 HRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKK 642

Query: 134 -NLHKIKAFK----GGNYTFQSLLDKXXXXXXXXXXXXDCSTAWGIKFLV-AGVDKKQPL 187
            ++H ++  +    GG   +  L+ K                +  I  LV A ++ +   
Sbjct: 643 KDIHALQQRESPEDGG---WHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAY 699

Query: 188 --KYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 231
              YTHCE+  S +LG+   IIPF +H+ + R  YQ+    +QA+G
Sbjct: 700 AGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQS-AMGKQAMG 744


>Glyma07g14980.1 
          Length = 709

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 19/231 (8%)

Query: 11  STQGRLEMLDT-HGENCGLVKNLAITGLVSTEILE-PLIDILFDCGMDKLVDDTHTKL-- 66
           S  G L   DT  GE+CGLVKNLA+   V+T+  E PLI +    G++ + D +  +L  
Sbjct: 133 SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHT 192

Query: 67  DEKYKVFLNGEWVGVCEDSNLFVAEXXXXXXXXXXXXQVEIKRDEQQKEVRIFADAGRIL 126
            + + V  NG  +G       F                V +  +E+Q  V + +D GR+ 
Sbjct: 193 PDSFLVIFNGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVC 252

Query: 127 RPLLVVEN------LHKIKAFKGGNYTFQSLLDKXXXXXXXXXXXXDCSTAWGIKFLVAG 180
           RPL++ +        H +K    G  TF   L              +         L+A 
Sbjct: 253 RPLVIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNA--------LIAL 304

Query: 181 VDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 231
            +     + TH E++   +LG+  G+IP+ +H+ + R  YQ     +QA+G
Sbjct: 305 YEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQC-AMGKQAMG 354


>Glyma01g00980.1 
          Length = 795

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 11  STQGRLEMLDT-HGENCGLVKNLAITGLVSTEILE-PLIDILFDCGMDKL----VDDTHT 64
           S  G L   DT  GE+CGLVKNLA+   V+T+  E PLI + +   + ++     ++ HT
Sbjct: 129 SQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEHLFAEELHT 188

Query: 65  KLDEKYKVFLNGEWVGVCEDSNLFVAEXXXXXXXXXXXXQVEIKRDEQQKEVRIFADAGR 124
              + + V  NG  +G       F                V +  +E+Q  V + +D GR
Sbjct: 189 P--DSFLVIFNGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYLASDGGR 246

Query: 125 ILRPLLVVEN------LHKIKAFKGGNYTFQSLLDKXXXXXXXXXXXXDCSTAWGIKFLV 178
           + RPL++ +        H +K    G  TF   L              +         L+
Sbjct: 247 VCRPLVIADKGISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNA--------LI 298

Query: 179 AGVDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIG 231
           A  +     + TH E++   +LG+  G+IP+ +H+ + R  YQ     +QA+G
Sbjct: 299 ALYEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAM-GKQAMG 350