Jatropha Genome Database

JcCB0476701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0476701.10 + phase: 0 /partial
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g51440.1                                                       235   2e-62
Glyma08g28530.1                                                       230   5e-61
Glyma14g25320.1                                                        99   2e-21
Glyma06g28110.1                                                        96   2e-20
Glyma03g12100.1                                                        94   4e-20
Glyma11g32040.1                                                        91   4e-19

>Glyma18g51440.1 
          Length = 496

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 110/157 (70%), Positives = 133/157 (84%), Gaps = 1/157 (0%)

Query: 1   AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
           AIDDAGHDKAS+ KVK LEAVD+A+GQLA+LLW+AESTGKFQ+FLCVTGDHSTPVEYGDH
Sbjct: 336 AIDDAGHDKASILKVKALEAVDKALGQLARLLWEAESTGKFQFFLCVTGDHSTPVEYGDH 395

Query: 61  SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPLPTVKAGEDLKDTKTEKERASKQLKA 120
           SFE VPF +  L+DFV A+ GES +  TSL+ FP+P+VK+GEDL D    +ER  K  +A
Sbjct: 396 SFESVPFTICRLKDFVGAI-GESTISKTSLDPFPIPSVKSGEDLLDDLETEERRDKCCQA 454

Query: 121 FSGDSVCEFSEIAAARGCLGRFPGGEMMGVIKAFLSL 157
           +SGDSV E +E+AAA+GCLGRFPGGEMMG++K FL+L
Sbjct: 455 YSGDSVYELNEVAAAKGCLGRFPGGEMMGIVKKFLNL 491


>Glyma08g28530.1 
          Length = 495

 Score =  230 bits (587), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 110/157 (70%), Positives = 134/157 (85%), Gaps = 2/157 (1%)

Query: 1   AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
           AIDDAGHDKAS+ KVK LEAVD+A+GQLA+LLW+AESTGKFQ+FLCVTGDHSTPVEYGDH
Sbjct: 336 AIDDAGHDKASILKVKALEAVDKALGQLARLLWEAESTGKFQFFLCVTGDHSTPVEYGDH 395

Query: 61  SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPLPTVKAGEDLKDTKTEKERASKQLKA 120
           SFE VPFA+  L+DFV A+ GES +  +SL+ FP+P+VK+GEDL D    +ER  K  +A
Sbjct: 396 SFESVPFAICRLKDFVGAI-GESTISKSSLDPFPIPSVKSGEDLLDDLETEER-DKCCEA 453

Query: 121 FSGDSVCEFSEIAAARGCLGRFPGGEMMGVIKAFLSL 157
           +SGDSV E +E+AAA+GCLGRFPGGEMMG+IK F++L
Sbjct: 454 YSGDSVYELNEVAAAKGCLGRFPGGEMMGIIKKFINL 490


>Glyma14g25320.1 
          Length = 93

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 63/95 (66%), Gaps = 10/95 (10%)

Query: 1  AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
           ID+A HDKAS+     L+  D   G     LW  ESTGKFQ+FLCV GDHSTPVEYGDH
Sbjct: 6  TIDNAAHDKASI-----LKPWDNWQG----FLWVTESTGKFQFFLCVRGDHSTPVEYGDH 56

Query: 61 SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPL 95
          SFE V F +  L+DFV A+ GES +  + L+ FP+
Sbjct: 57 SFESVSFTICRLRDFVGAI-GESTISKSFLDPFPI 90


>Glyma06g28110.1 
          Length = 101

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 63/95 (66%), Gaps = 16/95 (16%)

Query: 1  AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
          AIDDAGHDKAS+ KVK LEAVD+++G   K                  GDHSTPVEYGDH
Sbjct: 16 AIDDAGHDKASILKVKALEAVDKSLGIAGK---------------ASMGDHSTPVEYGDH 60

Query: 61 SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPL 95
          SFE VPFA+  L+DFV A+ GES +  +SL+ FP+
Sbjct: 61 SFESVPFAICWLRDFVGAI-GESTISKSSLDPFPI 94


>Glyma03g12100.1 
          Length = 95

 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 72  LQDFVAAVGGESIVMATSLESFPLPTVKAGEDLKDTKTEKERASKQLKAFSGDSVCEFSE 131
           L+DFV A+G ES +  +SL+ FP+P+VK GEDL D    +ER  +  +A+  D V E +E
Sbjct: 6   LKDFVGAIG-ESTISKSSLDPFPIPSVKPGEDLLDDLETEERRDECCEAYRDDLVYELNE 64

Query: 132 IAAARGCLGRFPGGEMMGVIKAFLSL 157
           +AAA+GCLGRFPGGEM+G+IK  ++L
Sbjct: 65  VAAAKGCLGRFPGGEMVGIIKKIINL 90


>Glyma11g32040.1 
          Length = 87

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 15/95 (15%)

Query: 1  AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
          AIDD GHDKA++ KVK LE  +Q                 F +FLC  GDHSTP EYGDH
Sbjct: 5  AIDDVGHDKANILKVKVLETQNQQ--------------KNFSFFLCTRGDHSTPAEYGDH 50

Query: 61 SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPL 95
          +FE + F +  L+DFV A+ GESI+  +SL+ FP+
Sbjct: 51 NFELIVFTICRLKDFVGAI-GESIISKSSLDPFPI 84