Jatropha Genome Database

JcCB0469561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0469561.10 + phase: 0 /partial
         (89 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g21060.1                                                        69   2e-12

>Glyma06g21060.1 
          Length = 764

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 35/41 (85%)

Query: 5   FEVESAPAIVFLKDPGVKPVVFHGLFNNSWFSDVMEKNKQQ 45
           F VESAPAIVFLKDPGVKPVV HG  NNS+F ++ME NKQQ
Sbjct: 391 FGVESAPAIVFLKDPGVKPVVHHGSVNNSFFLNLMENNKQQ 431