Jatropha Genome Database

JcCB0469081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0469081.10 + phase: 0 /pseudo/partial
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g08170.1                                                       154   9e-38
Glyma09g08170.2                                                       153   1e-37

>Glyma09g08170.1 
          Length = 358

 Score =  154 bits (388), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 87/103 (84%)

Query: 102 NINLAPDGSFWIGLLQLTSDWLKFVHTSKLSKHLVASFPKLIELVTGLRKKAMVVNVAAD 161
           NINLAPDGSFWI L+QLTS+  +FVH  K++KHLVASFP+LI LV G +KKA VVNVA +
Sbjct: 253 NINLAPDGSFWIALIQLTSEGFEFVHNYKITKHLVASFPRLINLVNGCKKKATVVNVATN 312

Query: 162 GRIIRMFDDPVGKVMSFVTSAFEFDGYLYLGSLNTNFIGKLPL 204
           GRIIR  DD  GKV++FVTSA EF+ +LYLGSLN+NF+GKLPL
Sbjct: 313 GRIIRKLDDSDGKVINFVTSAVEFEDHLYLGSLNSNFVGKLPL 355


>Glyma09g08170.2 
          Length = 279

 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/103 (70%), Positives = 87/103 (84%)

Query: 102 NINLAPDGSFWIGLLQLTSDWLKFVHTSKLSKHLVASFPKLIELVTGLRKKAMVVNVAAD 161
           NINLAPDGSFWI L+QLTS+  +FVH  K++KHLVASFP+LI LV G +KKA VVNVA +
Sbjct: 174 NINLAPDGSFWIALIQLTSEGFEFVHNYKITKHLVASFPRLINLVNGCKKKATVVNVATN 233

Query: 162 GRIIRMFDDPVGKVMSFVTSAFEFDGYLYLGSLNTNFIGKLPL 204
           GRIIR  DD  GKV++FVTSA EF+ +LYLGSLN+NF+GKLPL
Sbjct: 234 GRIIRKLDDSDGKVINFVTSAVEFEDHLYLGSLNSNFVGKLPL 276