Jatropha Genome Database

JcCB0463411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0463411.10 - phase: 2 /pseudo/partial
         (86 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g30580.1                                                        89   1e-18
Glyma13g44090.1                                                        89   1e-18
Glyma08g22550.1                                                        88   3e-18
Glyma15g01210.1                                                        86   6e-18
Glyma20g36910.1                                                        85   2e-17
Glyma03g40830.1                                                        78   2e-15
Glyma19g43530.1                                                        75   1e-14
Glyma01g44510.1                                                        75   1e-14
Glyma07g03550.1                                                        69   9e-13
Glyma20g17920.1                                                        57   5e-09

>Glyma10g30580.1 
          Length = 132

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 45/54 (83%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKIMGWLLRRVRLLS 84
          KKPLFFYVNLAKRY+QQHNEVELSALGMAIATVVTIAEILK  G    +  L S
Sbjct: 27 KKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGLATEKKVLTS 80


>Glyma13g44090.1 
          Length = 133

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/49 (81%), Positives = 44/49 (89%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKIMGWLLRR 79
          KKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVT+AEILK  G  + +
Sbjct: 30 KKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILKNNGLAVEK 78


>Glyma08g22550.1 
          Length = 144

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/41 (97%), Positives = 41/41 (100%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILK 71
          KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVT+AEILK
Sbjct: 39 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILK 79


>Glyma15g01210.1 
          Length = 131

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 39/41 (95%), Positives = 41/41 (100%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILK 71
          KKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVT+AEILK
Sbjct: 28 KKPLFFYVNLAKRYMQQHDEVELSALGMAIATVVTVAEILK 68


>Glyma20g36910.1 
          Length = 132

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/54 (75%), Positives = 45/54 (83%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKIMGWLLRRVRLLS 84
          KKPLFFYVNLAKRY+QQH+EVELSALGMAIATVVTI+EILK  G    +  L S
Sbjct: 27 KKPLFFYVNLAKRYIQQHDEVELSALGMAIATVVTISEILKNNGLATEKKVLTS 80


>Glyma03g40830.1 
          Length = 138

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 40/49 (81%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKIMGWLLRR 79
          KKPLFFYVNLAKRY+QQ NEV LSALGM I TVVTIAEILK  G  + +
Sbjct: 33 KKPLFFYVNLAKRYIQQRNEVVLSALGMGITTVVTIAEILKNNGLAIEK 81


>Glyma19g43530.1 
          Length = 129

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/49 (73%), Positives = 39/49 (79%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKIMGWLLRR 79
          KKPLFFYVNLAKRY+QQ +EV LSALGM I TVVTIAEILK  G    +
Sbjct: 33 KKPLFFYVNLAKRYIQQRDEVVLSALGMGITTVVTIAEILKNNGLATEK 81


>Glyma01g44510.1 
          Length = 132

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 40/49 (81%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKIMGWLLRR 79
          KKP FFY+NLAK+Y++Q N+VELSALGMAI TVV I+EILK  GW   +
Sbjct: 36 KKPFFFYLNLAKKYIKQGNDVELSALGMAIPTVVIISEILKSNGWAFEK 84


>Glyma07g03550.1 
          Length = 141

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 35/41 (85%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILK 71
          KKPLF      KRYMQQHNEVELSALGMAIATVVT+AEILK
Sbjct: 35 KKPLFSTSISPKRYMQQHNEVELSALGMAIATVVTVAEILK 75


>Glyma20g17920.1 
          Length = 54

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 27/28 (96%)

Query: 31 KKPLFFYVNLAKRYMQQHNEVELSALGM 58
          K+PLFFYVNLAKRYMQQ +EVELSALGM
Sbjct: 26 KQPLFFYVNLAKRYMQQRDEVELSALGM 53