Jatropha Genome Database

JcCB0459841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459841.10 - phase: 0 
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g05340.1                                                       223   1e-58
Glyma19g27570.1                                                       221   3e-58
Glyma19g27570.2                                                       164   4e-41
Glyma08g05580.2                                                        90   1e-18
Glyma08g05580.1                                                        90   2e-18
Glyma08g05580.3                                                        89   2e-18
Glyma05g34110.1                                                        88   6e-18
Glyma08g05580.4                                                        79   3e-15

>Glyma16g05340.1 
          Length = 485

 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 127/161 (78%), Gaps = 10/161 (6%)

Query: 1   MRPYKNSNNSRRPAAVLHLLCVAAFFSIIVFAIQSSFFAGNRNSDLNK----------EE 50
           MR +K  ++  R   VL+L+CVAA FS+++F  QSSFF+G  +SD ++          E 
Sbjct: 1   MRQHKQVSSINRRPTVLYLVCVAALFSLLLFYTQSSFFSGAVSSDSSRIDAVSSDRDSET 60

Query: 51  IHTLSEFQFSVQQCVANRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYD 110
           IH LS FQ SV+QCV NRGLGLTAH++DHCKL LK+PEGTNSTWYNAQFK +EPLEY+YD
Sbjct: 61  IHVLSNFQSSVKQCVDNRGLGLTAHVIDHCKLILKYPEGTNSTWYNAQFKKFEPLEYNYD 120

Query: 111 VCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRIAQL 151
           +C+ ILLWEQYRNMTTVLTREYLDARP GW+DYA +RIAQL
Sbjct: 121 LCETILLWEQYRNMTTVLTREYLDARPGGWVDYAPQRIAQL 161


>Glyma19g27570.1 
          Length = 314

 Score =  221 bits (563), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/161 (65%), Positives = 125/161 (77%), Gaps = 10/161 (6%)

Query: 1   MRPYKNSNNSRRPAAVLHLLCVAAFFSIIVFAIQSSFFAGNRNSD----------LNKEE 50
           MR +K  ++  R   VL+LLC AAFFS+++F IQSSFF+G  +SD           + E 
Sbjct: 1   MRQHKQVSSLNRRPTVLYLLCAAAFFSLLLFYIQSSFFSGTVSSDSPTKDTVSSDRDSET 60

Query: 51  IHTLSEFQFSVQQCVANRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYD 110
           I  LS  Q SV+QCV NRGLGLTAHI+DHCKL LK+PEGTNSTWYNAQFK +EPLEY+YD
Sbjct: 61  IRVLSNVQSSVKQCVDNRGLGLTAHIIDHCKLILKYPEGTNSTWYNAQFKKFEPLEYNYD 120

Query: 111 VCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRIAQL 151
           +C+ ILLWEQYRNMTTVLTREYLDARP GW+DYA +RIAQL
Sbjct: 121 LCETILLWEQYRNMTTVLTREYLDARPGGWMDYAPQRIAQL 161


>Glyma19g27570.2 
          Length = 254

 Score =  164 bits (416), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 72/85 (84%), Positives = 80/85 (94%)

Query: 67  NRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQYRNMTT 126
           NRGLGLTAHI+DHCKL LK+PEGTNSTWYNAQFK +EPLEY+YD+C+ ILLWEQYRNMTT
Sbjct: 17  NRGLGLTAHIIDHCKLILKYPEGTNSTWYNAQFKKFEPLEYNYDLCETILLWEQYRNMTT 76

Query: 127 VLTREYLDARPDGWLDYAAKRIAQL 151
           VLTREYLDARP GW+DYA +RIAQL
Sbjct: 77  VLTREYLDARPGGWMDYAPQRIAQL 101


>Glyma08g05580.2 
          Length = 345

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 46  LNKEEIHTLSEFQFSVQQCVANRGLGLTA-HIVDHCKLTLKFPEGTNSTWYNAQFKIYEP 104
           L  E+   L     + Q+CV+  GLGL A    D+C+ T+ FP  T   W + +    E 
Sbjct: 37  LTDEDTQALLSLHDTFQKCVSANGLGLKATRGTDYCQTTINFPSDTIPKWKDPKTGELEA 96

Query: 105 LEYHYDVCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRI 148
           L + +++C+A+  WEQ RN TT+LT+E++D+ P+GW +YA +RI
Sbjct: 97  LSFDFNLCEAVATWEQVRNSTTILTKEFIDSLPNGWEEYAWRRI 140


>Glyma08g05580.1 
          Length = 442

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 46  LNKEEIHTLSEFQFSVQQCVANRGLGLTA-HIVDHCKLTLKFPEGTNSTWYNAQFKIYEP 104
           L  E+   L     + Q+CV+  GLGL A    D+C+ T+ FP  T   W + +    E 
Sbjct: 37  LTDEDTQALLSLHDTFQKCVSANGLGLKATRGTDYCQTTINFPSDTIPKWKDPKTGELEA 96

Query: 105 LEYHYDVCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRI 148
           L + +++C+A+  WEQ RN TT+LT+E++D+ P+GW +YA +RI
Sbjct: 97  LSFDFNLCEAVATWEQVRNSTTILTKEFIDSLPNGWEEYAWRRI 140


>Glyma08g05580.3 
          Length = 417

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)

Query: 46  LNKEEIHTLSEFQFSVQQCVANRGLGLTA-HIVDHCKLTLKFPEGTNSTWYNAQFKIYEP 104
           L  E+   L     + Q+CV+  GLGL A    D+C+ T+ FP  T   W + +    E 
Sbjct: 12  LTDEDTQALLSLHDTFQKCVSANGLGLKATRGTDYCQTTINFPSDTIPKWKDPKTGELEA 71

Query: 105 LEYHYDVCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRIAQ 150
           L + +++C+A+  WEQ RN TT+LT+E++D+ P+GW +YA +RI +
Sbjct: 72  LSFDFNLCEAVATWEQVRNSTTILTKEFIDSLPNGWEEYAWRRINK 117


>Glyma05g34110.1 
          Length = 435

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 49  EEIHTLSEFQFSVQQCVANRGLGLTA-HIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEY 107
           E+   L     + Q+CV   GLGL A    D+C+ T+ FP  T   W + +    E L +
Sbjct: 33  EDTQALLSLHDTFQKCVTANGLGLKATRGTDYCQTTISFPSDTIPKWRDPKTGELEALSF 92

Query: 108 HYDVCDAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRI 148
            +++C+A+  WEQ RN TT+LT+E++D+ P+GW +YA +RI
Sbjct: 93  DFNLCEAVATWEQVRNSTTILTKEFIDSLPNGWEEYAWRRI 133


>Glyma08g05580.4 
          Length = 402

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)

Query: 69  GLGLTA-HIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQYRNMTTV 127
           GLGL A    D+C+ T+ FP  T   W + +    E L + +++C+A+  WEQ RN TT+
Sbjct: 20  GLGLKATRGTDYCQTTINFPSDTIPKWKDPKTGELEALSFDFNLCEAVATWEQVRNSTTI 79

Query: 128 LTREYLDARPDGWLDYAAKRIAQ 150
           LT+E++D+ P+GW +YA +RI +
Sbjct: 80  LTKEFIDSLPNGWEEYAWRRINK 102