Jatropha Genome Database

JcCB0459051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459051.10 + phase: 0 
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g31710.2                                                       214   3e-56
Glyma10g31710.1                                                       214   3e-56
Glyma20g35900.1                                                       213   8e-56
Glyma16g33650.1                                                       202   1e-52
Glyma09g29110.1                                                       194   3e-50
Glyma16g05550.1                                                        87   1e-17
Glyma19g27230.2                                                        80   9e-16
Glyma19g27230.1                                                        80   1e-15

>Glyma10g31710.2 
          Length = 425

 Score =  214 bits (546), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 125/174 (71%), Gaps = 1/174 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  ST +DSGGN + P ++GEV+++VPG+RIPKPVDFTQ LGD LS+N++ERLSALRT
Sbjct: 1   MGCFVSTPKDSGGNRRRPGSIGEVSVYVPGLRIPKPVDFTQSLGDYLSKNIVERLSALRT 60

Query: 61  RIVVMAGQE-XXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFS 119
           RIVVMAGQE             QHGGST+ DLQQALEDYLPVLLGLVENG+ LQ ++QF 
Sbjct: 61  RIVVMAGQEGPTITRTKRKSATQHGGSTLADLQQALEDYLPVLLGLVENGSHLQYKVQFD 120

Query: 120 WLNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           W+NQED  EETTMSN WYE+LSVLH                 TS D H  K+SE
Sbjct: 121 WVNQEDDTEETTMSNAWYEVLSVLHLMAMLLLSQANLLLLPRTSTDSHQPKVSE 174


>Glyma10g31710.1 
          Length = 425

 Score =  214 bits (546), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 125/174 (71%), Gaps = 1/174 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  ST +DSGGN + P ++GEV+++VPG+RIPKPVDFTQ LGD LS+N++ERLSALRT
Sbjct: 1   MGCFVSTPKDSGGNRRRPGSIGEVSVYVPGLRIPKPVDFTQSLGDYLSKNIVERLSALRT 60

Query: 61  RIVVMAGQE-XXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFS 119
           RIVVMAGQE             QHGGST+ DLQQALEDYLPVLLGLVENG+ LQ ++QF 
Sbjct: 61  RIVVMAGQEGPTITRTKRKSATQHGGSTLADLQQALEDYLPVLLGLVENGSHLQYKVQFD 120

Query: 120 WLNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           W+NQED  EETTMSN WYE+LSVLH                 TS D H  K+SE
Sbjct: 121 WVNQEDDTEETTMSNAWYEVLSVLHLMAMLLLSQANLLLLPRTSTDSHQPKVSE 174


>Glyma20g35900.1 
          Length = 425

 Score =  213 bits (542), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 126/174 (72%), Gaps = 1/174 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  ST +DSGGN + P ++GEV+++VPG+RIPKPVDF Q LGD LS+N++ERLSALRT
Sbjct: 1   MGCFVSTPKDSGGNRRRPGSIGEVSVYVPGLRIPKPVDFAQSLGDYLSKNIVERLSALRT 60

Query: 61  RIVVMAGQE-XXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFS 119
           RIVVMAGQE             QHGGST+ DLQQALEDYL VLLGLVENG+ LQ ++QF+
Sbjct: 61  RIVVMAGQEGPTITRTKRKSATQHGGSTLADLQQALEDYLLVLLGLVENGSHLQYKVQFA 120

Query: 120 WLNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           W+NQED AEETTMSN WYE+LSVLH                 TS DGH  K+SE
Sbjct: 121 WVNQEDEAEETTMSNAWYEVLSVLHLMAMLLLSQSDLLLLPRTSTDGHQPKVSE 174


>Glyma16g33650.1 
          Length = 425

 Score =  202 bits (514), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/174 (58%), Positives = 127/174 (72%), Gaps = 2/174 (1%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC+ S  +DSGGN + P ++GE++++VPG+RIPKPVDF Q LGD LS+N++ERLSALRT
Sbjct: 1   MGCVVSAPKDSGGNRRRPGSIGELSVYVPGLRIPKPVDFAQSLGDYLSKNIVERLSALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMAGQE            QHGGST+ DL QALEDYLPV+LGLV+NG+ LQ ++QF+W
Sbjct: 61  RIVVMAGQEGPTITRTKRKT-QHGGSTLADLLQALEDYLPVVLGLVKNGSHLQYKVQFTW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXX-XITSNDGHLSKLSE 173
           +NQED  EETTMSN WYE+LSVLH                  +S++GHL K+SE
Sbjct: 120 VNQEDDKEETTMSNAWYEVLSVLHLMAMLSLSQANLLLFPRSSSSNGHLPKVSE 173


>Glyma09g29110.1 
          Length = 425

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/174 (56%), Positives = 125/174 (71%), Gaps = 2/174 (1%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC+ ST +DSGGN + P ++GEV+++VPG+RIPKPVDF Q LG+ LS+N++E LSALR 
Sbjct: 1   MGCVVSTTKDSGGNRRRPGSIGEVSVYVPGLRIPKPVDFAQSLGNYLSKNIVEHLSALRM 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIV+MAGQE            QHGGS + DL QALEDYLPV+LGLV++G+ LQ ++QF+W
Sbjct: 61  RIVIMAGQEGPTITRTKRKT-QHGGSMLADLLQALEDYLPVVLGLVKDGSHLQYKVQFTW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLH-XXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           +NQED  EETTMSN WYE+LSVLH                  +S+DGHL K+SE
Sbjct: 120 VNQEDDKEETTMSNAWYEVLSVLHLMAMLSLSQANLLLLPRSSSSDGHLPKVSE 173


>Glyma16g05550.1 
          Length = 414

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 20/144 (13%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  S  R      K   +  EV +FVP  RIP   D  + L   + R+L ++L+ALR 
Sbjct: 1   MGCTYSVYR------KKKSSFPEVVVFVPSTRIPVQSDLQRVLKGVIPRDLADKLAALRN 54

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           +IV++A                 GGS + +LQ+AL +YL VL+GL +    L+  + F W
Sbjct: 55  QIVLIA--------------EDTGGSAVTELQRALNEYLSVLIGLTKKEYGLEGVIDFKW 100

Query: 121 LNQEDTAEETTMSNFWYELLSVLH 144
            N ED  +++++SN W+E+LS +H
Sbjct: 101 KNIEDGRQDSSISNTWFEVLSSVH 124


>Glyma19g27230.2 
          Length = 399

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 20/144 (13%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  S  R      K   +  EV +FVP  RIP   D  + +   + R+L ++L++LR 
Sbjct: 20  MGCTYSVYR------KKKSSFPEVVVFVPSTRIPVQSDLQRMVKGVIPRDLADKLTSLRN 73

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           +IV++A                 GGS + +L++AL++YL VL+GL +     +  + F W
Sbjct: 74  QIVLIA--------------EDTGGSAIAELRRALKEYLSVLIGLTKKEYGPEGLIDFKW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLH 144
            N ED  +++++SN W+E+LS +H
Sbjct: 120 KNLEDGRQDSSISNTWFEVLSSVH 143


>Glyma19g27230.1 
          Length = 433

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 20/144 (13%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC  S  R      K   +  EV +FVP  RIP   D  + +   + R+L ++L++LR 
Sbjct: 20  MGCTYSVYR------KKKSSFPEVVVFVPSTRIPVQSDLQRMVKGVIPRDLADKLTSLRN 73

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           +IV++A                 GGS + +L++AL++YL VL+GL +     +  + F W
Sbjct: 74  QIVLIA--------------EDTGGSAIAELRRALKEYLSVLIGLTKKEYGPEGLIDFKW 119

Query: 121 LNQEDTAEETTMSNFWYELLSVLH 144
            N ED  +++++SN W+E+LS +H
Sbjct: 120 KNLEDGRQDSSISNTWFEVLSSVH 143