Jatropha Genome Database

JcCB0457001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0457001.10 + phase: 0 /partial
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g33360.1                                                       318   3e-87
Glyma19g36070.1                                                       314   3e-86
Glyma14g18130.1                                                       119   1e-27
Glyma19g09080.1                                                        82   3e-16

>Glyma03g33360.1 
          Length = 373

 Score =  318 bits (814), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 152/170 (89%), Positives = 165/170 (97%)

Query: 16  MGIADAILDLVSSGTTLKENNLKEIEGGVVLESQAVLVASRKSLMQRKGALDTIHEILER 75
           MGIADAILDLVSSGTTL+ENNLKEI+GGVVLESQAV +ASRKS++QRKG L+T HE+LER
Sbjct: 204 MGIADAILDLVSSGTTLRENNLKEIKGGVVLESQAVFIASRKSMIQRKGVLETTHEMLER 263

Query: 76  LEAHLRAVGQFTVTANMRGSSAEEVAERVLSQPSLSGLQGPTVSPVFCKRDGKVSPDYYA 135
           LEAHLRA+GQFTVTANMRGSSAEEVAER+LSQPSL GLQGPTVSPVFCK DGKV+PDYYA
Sbjct: 264 LEAHLRAIGQFTVTANMRGSSAEEVAERILSQPSLMGLQGPTVSPVFCKHDGKVTPDYYA 323

Query: 136 IVICVPKKALYKSVQQLRAIGGSGVLISPLTYIFEEETPRWRQLLSKLGL 185
           IVICVP+KALYKS+QQLRAIGGSGVLISPLTYIF+EETPRWRQLLSKLGL
Sbjct: 324 IVICVPQKALYKSIQQLRAIGGSGVLISPLTYIFDEETPRWRQLLSKLGL 373


>Glyma19g36070.1 
          Length = 368

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 151/170 (88%), Positives = 164/170 (96%)

Query: 16  MGIADAILDLVSSGTTLKENNLKEIEGGVVLESQAVLVASRKSLMQRKGALDTIHEILER 75
           MGIADAILDLVSSGTTL+ENNLKEI+GGVVLESQAV + SRKS++QRKG L+T HE+LER
Sbjct: 199 MGIADAILDLVSSGTTLRENNLKEIKGGVVLESQAVFITSRKSVIQRKGVLETTHEMLER 258

Query: 76  LEAHLRAVGQFTVTANMRGSSAEEVAERVLSQPSLSGLQGPTVSPVFCKRDGKVSPDYYA 135
           LEAHLRA+GQFTVTANMRGSSAEEVAER+LSQPSL GLQGPTVSPVFCKRDGKV+ DYYA
Sbjct: 259 LEAHLRAIGQFTVTANMRGSSAEEVAERILSQPSLMGLQGPTVSPVFCKRDGKVTADYYA 318

Query: 136 IVICVPKKALYKSVQQLRAIGGSGVLISPLTYIFEEETPRWRQLLSKLGL 185
           IVICVP+KALYKS+QQLRAIGGSGVLISPLTYIF+EETPRWRQLLSKLGL
Sbjct: 319 IVICVPQKALYKSIQQLRAIGGSGVLISPLTYIFDEETPRWRQLLSKLGL 368


>Glyma14g18130.1 
          Length = 218

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 75/90 (83%), Gaps = 9/90 (10%)

Query: 16  MGIADAILDLVSSGTTLKENNLKEIEGGVVLESQAVLVASRKSLMQRKGALDTIHEILER 75
           MGIADAILD+VS+GTTL+ENNLKEI+GGVVLESQ V +ASRKS++Q+KG L+T  E+LER
Sbjct: 119 MGIADAILDIVSNGTTLRENNLKEIKGGVVLESQVVFIASRKSMIQQKGVLETTQEMLER 178

Query: 76  LEAHLRAVGQFTVTANMRGSSAEEVAERVL 105
           LEAHLRA+G         GSSAEEVA+ +L
Sbjct: 179 LEAHLRAIG---------GSSAEEVAKIIL 199


>Glyma19g09080.1 
          Length = 74

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/97 (52%), Positives = 58/97 (59%), Gaps = 27/97 (27%)

Query: 16  MGIADAILDLVSSGTTLKENNLKEIEGGVVLESQAV--LVASRKSLMQRKGALDTIHEIL 73
           MGI DA+LD+VSSGTTL ENNLKEI+GG VLESQ +   ++       R           
Sbjct: 1   MGIVDAMLDIVSSGTTLIENNLKEIKGGDVLESQIINFYISQSPPYSTR----------- 49

Query: 74  ERLEAHLRAVGQFTVTANMRGSSAEEVAERVLSQPSL 110
                         VTANMRGSSAEEVAER+LSQPSL
Sbjct: 50  --------------VTANMRGSSAEEVAERILSQPSL 72