Jatropha Genome Database

JcCB0456881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456881.10 - phase: 0 /partial
         (148 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g40460.1                                                       251   2e-67
Glyma18g45380.1                                                       248   1e-66
Glyma03g02530.1                                                       218   2e-57
Glyma03g02550.1                                                       143   5e-35
Glyma01g34610.1                                                        55   3e-08

>Glyma09g40460.1 
          Length = 363

 Score =  251 bits (640), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 117/148 (79%), Positives = 132/148 (89%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           LAGVKEC+GNDR++QYT+ GIVVWSGNDD+CHDARW +GATGVISV SNLVPGLMR+LM 
Sbjct: 216 LAGVKECVGNDRIKQYTDDGIVVWSGNDDQCHDARWGYGATGVISVVSNLVPGLMRELMF 275

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
            G +P LNSKLLPLI WLF  PNPIGLNTALAQLGVVRPVFRLP+VPLP+ KR+EF NLV
Sbjct: 276 GGVNPTLNSKLLPLIDWLFHMPNPIGLNTALAQLGVVRPVFRLPFVPLPVDKRIEFANLV 335

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           K IGRE+FVG +DV+VL+DDDF LV RY
Sbjct: 336 KEIGREHFVGNKDVEVLDDDDFFLVSRY 363


>Glyma18g45380.1 
          Length = 363

 Score =  248 bits (634), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 115/148 (77%), Positives = 132/148 (89%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           LAGVKEC+GNDR++QYT+ GIVVWSGNDD+CHDARW +GATGV+SVASNLVPGLMR+LM 
Sbjct: 216 LAGVKECVGNDRIKQYTDDGIVVWSGNDDQCHDARWGYGATGVVSVASNLVPGLMRELMF 275

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
            G +P LNSKLLPLI WLF  PNPIGLNTALAQLGV+RPVFRLP+VPLP+ KR+EF NLV
Sbjct: 276 GGVNPTLNSKLLPLIDWLFHMPNPIGLNTALAQLGVIRPVFRLPFVPLPVDKRIEFANLV 335

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           K IGRE+FVG + V+VL+DDDF LV RY
Sbjct: 336 KEIGREHFVGNKVVEVLDDDDFFLVSRY 363


>Glyma03g02530.1 
          Length = 365

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/148 (68%), Positives = 124/148 (83%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           L G+KEC+GN+R++ YT++GIVVW+G D   HDARW  GA GV SVASNL+PGLMR+LM 
Sbjct: 218 LVGLKECVGNERIKHYTDQGIVVWTGIDKTSHDARWDFGAVGVQSVASNLIPGLMRELMF 277

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
           EGK+  LNSK++PL  WL QEP PI LNTALAQLGV++PVFRLP +PL + KR+EFV LV
Sbjct: 278 EGKNATLNSKVIPLFDWLSQEPVPIALNTALAQLGVIKPVFRLPLLPLLVEKRIEFVMLV 337

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           K IGRE+FVG++DVQVL+DDDF+ VGRY
Sbjct: 338 KEIGREHFVGDKDVQVLDDDDFITVGRY 365


>Glyma03g02550.1 
          Length = 150

 Score =  143 bits (361), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/135 (53%), Positives = 95/135 (70%), Gaps = 18/135 (13%)

Query: 2   AGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMIE 61
            G K+C+ + +   +  +GI VWS ND+ECHDARW  GA         ++ GL+R+LM E
Sbjct: 11  CGKKDCLKDSK---FWCEGIGVWSANDEECHDARWDFGA---------IISGLIRELMFE 58

Query: 62  GKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLVK 121
           GK+  +NSKL+P   WL  EPNPI LNTALAQLGV++P+FRLP+VPLP+ KR+E      
Sbjct: 59  GKNDTMNSKLMPQFYWLCLEPNPIPLNTALAQLGVIKPIFRLPHVPLPVEKRME------ 112

Query: 122 AIGRENFVGEQDVQV 136
            IGRE+FVGE+DVQ+
Sbjct: 113 QIGREHFVGEKDVQI 127


>Glyma01g34610.1 
          Length = 94

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 19 KGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMIEGKDPALNSKLLPL 74
          KGIVVWS N      ARW  G  GV SV SNLVPGL R+LM EGK+  LNSKL+P 
Sbjct: 16 KGIVVWSANG-----ARWDFGVVGVQSVVSNLVPGLTRELMFEGKNDTLNSKLMPF 66