Jatropha Genome Database

JcCB0456651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456651.10 - phase: 2 /partial
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g29240.1                                                       151   4e-37
Glyma19g31960.1                                                       145   2e-35
Glyma02g33090.1                                                       137   8e-33

>Glyma03g29240.1 
          Length = 420

 Score =  151 bits (381), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 100/177 (56%), Gaps = 1/177 (0%)

Query: 1   SRWDSSFSRMPGSEYFSSINYGAADDPASESDYVGSLCFERKIDLTSYIKWWGSNKTRQX 60
           SRWD ++ RM GS+YF+S++YGA DD A+ES+YV   C +RKIDLTS+IKWWGSNK+R  
Sbjct: 167 SRWDPTYGRMSGSDYFNSMHYGAGDDSAAESEYVSGFCLDRKIDLTSHIKWWGSNKSRHS 226

Query: 61  XXXXXXXXXXXHGYAEDVGGELKTSEWAVQPTEPYQMPCLGMPIDGKKHXXXXXXXXXXX 120
                       G A DV  ELK  E  VQP EPYQMP LG   + KKH           
Sbjct: 227 DAGTRLSEEKKLGSAGDVCSELKQLEQKVQPMEPYQMPQLGRLHNEKKHRSSSLSALSIL 286

Query: 121 XXXXXXXXXQERASKKQXXXX-XXXXXXXXXXXKMDYGKAVEKSTSHDNSNERLGVA 176
                    QE+ASK+Q                K+D+GKAVEK ++HD  N+RL +A
Sbjct: 287 SQSAAYKSLQEKASKRQENSTDNDENENKNTINKLDHGKAVEKPSNHDGGNDRLNIA 343


>Glyma19g31960.1 
          Length = 413

 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 99/177 (55%), Gaps = 3/177 (1%)

Query: 1   SRWDSSFSRMPGSEYFSSINYGAADDPASESDYVGSLCFERKIDLTSYIKWWGSNKTRQX 60
           SRWD S+ RM GS+YF+S++YG  DD A+ES+YV   C ERKIDLTS+IKWWGSNK+R  
Sbjct: 166 SRWDPSYGRMSGSDYFNSMHYG--DDSAAESEYVSGFCIERKIDLTSHIKWWGSNKSRHS 223

Query: 61  XXXXXXXXXXXHGYAEDVGGELKTSEWAVQPTEPYQMPCLGMPIDGKKHXXXXXXXXXXX 120
                       G A D+  E+K  E  VQPT PYQMP LG P + KKH           
Sbjct: 224 DAGTRLSEEKKLGSAGDICIEIKQLEQKVQPTAPYQMPQLGRPQNEKKHRSSSVSALSIL 283

Query: 121 XXXXXXXXXQERASKK-QXXXXXXXXXXXXXXXKMDYGKAVEKSTSHDNSNERLGVA 176
                    QE+ASK  +               K+D+GKAVEK ++HD  N+RL +A
Sbjct: 284 SQSAAYKSLQEKASKTLENIIDNDENENKNTINKLDHGKAVEKPSNHDGGNDRLDIA 340


>Glyma02g33090.1 
          Length = 447

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 97/178 (54%), Gaps = 4/178 (2%)

Query: 1   SRWDSSFSRMPGSEYFSSINYGAADDPASESDYVGSLCFERKIDLTSYIKWWGSNKTRQX 60
           SRW+ ++ RM GS+YF+S  YG  +D A+E+ Y+ S C ERKIDLTSYIKWWGSNK++Q 
Sbjct: 199 SRWNPTYGRMAGSDYFNSRYYG--EDSAAETKYLSSFCIERKIDLTSYIKWWGSNKSQQP 256

Query: 61  XXXXXXXXXXXHGYAEDVGGELKTSEWAVQPTEPYQMPCLGMPIDGKKHXXXXXXXXXXX 120
                      HG+A D   E KT E  V P+EPYQ+  LGMP +  KH           
Sbjct: 257 DSRVRFSDVRKHGFAGDFCIEHKTLEQNVHPSEPYQLLALGMPCERIKHEHSSVSALSIV 316

Query: 121 XXXXXXXXXQERASKKQXXXXXX--XXXXXXXXXKMDYGKAVEKSTSHDNSNERLGVA 176
                    Q+RAS +Q                 K+D+GKA EKS ++D  NERL +A
Sbjct: 317 LQSAAYKNLQQRASTRQENSNYNDENENKDTIINKLDHGKAAEKSLNNDGGNERLDIA 374