Jatropha Genome Database

JcCB0456251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456251.10 - phase: 2 /pseudo/partial
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g27810.1                                                       103   1e-22
Glyma02g01060.2                                                       100   9e-22
Glyma02g01060.1                                                       100   9e-22
Glyma02g01060.3                                                       100   1e-21

>Glyma10g27810.1 
          Length = 1003

 Score =  103 bits (256), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/65 (75%), Positives = 57/65 (87%)

Query: 88  AMASLGGLLGGIFKGTDTGESTRQQYAPTVRLINGLETEMSALSDSELRNKTSVLKERAL 147
           A+ASLGGLLGGIFKG DTGE+TRQQYA TV +INGLE E+SALSDSELR++T  L+ERA 
Sbjct: 61  AVASLGGLLGGIFKGADTGEATRQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQ 120

Query: 148 NGESL 152
            G+SL
Sbjct: 121 QGQSL 125


>Glyma02g01060.2 
          Length = 953

 Score =  100 bits (249), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 58/65 (89%)

Query: 88  AMASLGGLLGGIFKGTDTGESTRQQYAPTVRLINGLETEMSALSDSELRNKTSVLKERAL 147
           ++ASLGGLLGGIFKG DTGE+T+QQYA TV +INGLE E+SALSDSELR++T  L+ERA 
Sbjct: 58  SVASLGGLLGGIFKGADTGEATKQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQ 117

Query: 148 NGESL 152
           +G+SL
Sbjct: 118 HGQSL 122


>Glyma02g01060.1 
          Length = 987

 Score =  100 bits (249), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 58/65 (89%)

Query: 88  AMASLGGLLGGIFKGTDTGESTRQQYAPTVRLINGLETEMSALSDSELRNKTSVLKERAL 147
           ++ASLGGLLGGIFKG DTGE+T+QQYA TV +INGLE E+SALSDSELR++T  L+ERA 
Sbjct: 58  SVASLGGLLGGIFKGADTGEATKQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQ 117

Query: 148 NGESL 152
           +G+SL
Sbjct: 118 HGQSL 122


>Glyma02g01060.3 
          Length = 842

 Score =  100 bits (248), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 58/65 (89%)

Query: 88  AMASLGGLLGGIFKGTDTGESTRQQYAPTVRLINGLETEMSALSDSELRNKTSVLKERAL 147
           ++ASLGGLLGGIFKG DTGE+T+QQYA TV +INGLE E+SALSDSELR++T  L+ERA 
Sbjct: 58  SVASLGGLLGGIFKGADTGEATKQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQ 117

Query: 148 NGESL 152
           +G+SL
Sbjct: 118 HGQSL 122